RNA–Protein interactions for RNA: ENST00000433368.6

CRISP3-204, Transcript of cysteine rich secretory protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CRISP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRISP3-204ENST00000433368 AEBP2Q6ZN18 517 aaPredicted RBP15.24■□□□□ 0.03
CRISP3-204ENST00000433368 CHIC1Q5VXU3 224 aa14.39□□□□□ -0.11
CRISP3-204ENST00000433368 SENP3Q9H4L4 574 aaPredicted RBP13.05□□□□□ -0.32
CRISP3-204ENST00000433368 PHF23Q9BUL5 403 aaPredicted RBP12.85□□□□□ -0.35
CRISP3-204ENST00000433368 POTEDQ86YR6 584 aa12.84□□□□□ -0.35
CRISP3-204ENST00000433368 FOXD1Q16676 465 aa12.16□□□□□ -0.46
CRISP3-204ENST00000433368 MSH5O43196 834 aa11.46□□□□□ -0.57
CRISP3-204ENST00000433368 PLPPR3Q6T4P5 718 aa11.45□□□□□ -0.58
CRISP3-204ENST00000433368 PIAS4Q8N2W9 510 aaPredicted RBP11.31□□□□□ -0.6
CRISP3-204ENST00000433368 PPP6R1Q9UPN7 881 aa11.26□□□□□ -0.61
CRISP3-204ENST00000433368 ADRA2BP18089 450 aa11.21□□□□□ -0.61
CRISP3-204ENST00000433368 DMRT2Q9Y5R5 561 aa10.34□□□□□ -0.75
CRISP3-204ENST00000433368 MAPK8IP2Q13387 824 aaPredicted RBP10.33□□□□□ -0.76
CRISP3-204ENST00000433368 SCAF1Q9H7N4 1312 aaKnown RBP10.32□□□□□ -0.76
CRISP3-204ENST00000433368 PPP4R3CPQ6ZMV5 832 aa10.01□□□□□ -0.81
CRISP3-204ENST00000433368 HOXD11P31277 338 aaPredicted RBP9.92□□□□□ -0.82
CRISP3-204ENST00000433368 CACNB1Q02641 598 aaPredicted RBP9.87□□□□□ -0.83
CRISP3-204ENST00000433368 CNKSR2Q8WXI2 1034 aa9.87□□□□□ -0.83
CRISP3-204ENST00000433368 DCAF8L1A6NGE4 600 aa9.85□□□□□ -0.83
CRISP3-204ENST00000433368 RNF216Q9NWF9 866 aaPredicted RBP9.81□□□□□ -0.84
CRISP3-204ENST00000433368 RNF39Q9H2S5 420 aa9.75□□□□□ -0.85
CRISP3-204ENST00000433368 POTEHQ6S545 545 aa9.7□□□□□ -0.86
CRISP3-204ENST00000433368 DNAJC5BQ9UF47 199 aa9.66□□□□□ -0.86
CRISP3-204ENST00000433368 C1QBPQ07021 282 aaKnown RBP9.62□□□□□ -0.87
CRISP3-204ENST00000433368 NCBP3Q53F19 620 aaKnown RBP9.62□□□□□ -0.87
CRISP3-204ENST00000433368 NPM3O75607 178 aaKnown RBP9.44□□□□□ -0.9
CRISP3-204ENST00000433368 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.41□□□□□ -0.9
CRISP3-204ENST00000433368 U3KPZ7 1027 aaPredicted RBP9.2□□□□□ -0.94
CRISP3-204ENST00000433368 KCNA4P22459 653 aa9.12□□□□□ -0.95
CRISP3-204ENST00000433368 CAPN15O75808 1086 aa9.08□□□□□ -0.96
CRISP3-204ENST00000433368 DSG3P32926 999 aa9.08□□□□□ -0.96
CRISP3-204ENST00000433368 SPINK5Q9NQ38 1064 aaPredicted RBP9.08□□□□□ -0.96
CRISP3-204ENST00000433368 SLC4A2P04920 1241 aa9.04□□□□□ -0.96
CRISP3-204ENST00000433368 APLP2Q06481 763 aa9□□□□□ -0.97
CRISP3-204ENST00000433368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.95□□□□□ -0.98
CRISP3-204ENST00000433368 HNRNPUL2Q1KMD3 747 aaKnown RBP8.95□□□□□ -0.98
CRISP3-204ENST00000433368 ZNF219Q9P2Y4 722 aaPredicted RBP8.92□□□□□ -0.98
CRISP3-204ENST00000433368 TRHP20396 242 aaPredicted RBP8.9□□□□□ -0.98
CRISP3-204ENST00000433368 SAMD1Q6SPF0 538 aaPredicted RBP8.88□□□□□ -0.99
CRISP3-204ENST00000433368 ABCB7O75027 752 aa8.84□□□□□ -0.99
CRISP3-204ENST00000433368 PLSCR2Q9NRY7 297 aa8.78□□□□□ -1
CRISP3-204ENST00000433368 MYCNP04198 464 aaPredicted RBP8.75□□□□□ -1.01
CRISP3-204ENST00000433368 RBM42Q9BTD8 480 aaKnown RBP8.69□□□□□ -1.02
CRISP3-204ENST00000433368 POLA2Q14181 598 aa8.65□□□□□ -1.02
CRISP3-204ENST00000433368 SLC4A1APQ9BWU0 796 aaKnown RBP8.61□□□□□ -1.03
CRISP3-204ENST00000433368 FOXD4L1Q9NU39 408 aa8.59□□□□□ -1.03
CRISP3-204ENST00000433368 CHRDL2Q6WN34 429 aa8.52□□□□□ -1.05
CRISP3-204ENST00000433368 ATF5Q9Y2D1 282 aaPredicted RBP8.52□□□□□ -1.05
CRISP3-204ENST00000433368 ZBTB12Q9Y330 459 aaPredicted RBP8.52□□□□□ -1.05
CRISP3-204ENST00000433368 AKT1S1Q96B36 256 aa8.48□□□□□ -1.05
CRISP3-204ENST00000433368 ATXN8OSP0DMR3 200 aa8.38□□□□□ -1.07
CRISP3-204ENST00000433368 ZBTB22O15209 634 aa8.38□□□□□ -1.07
CRISP3-204ENST00000433368 REM2Q8IYK8 340 aaPredicted RBP8.37□□□□□ -1.07
CRISP3-204ENST00000433368 OSCARQ8IYS5 282 aa8.35□□□□□ -1.07
CRISP3-204ENST00000433368 PIP4P2Q8N4L2 257 aa8.29□□□□□ -1.08
CRISP3-204ENST00000433368 SP7Q8TDD2 431 aaPredicted RBP8.27□□□□□ -1.09
CRISP3-204ENST00000433368 PITPNM1O00562 1244 aa8.26□□□□□ -1.09
CRISP3-204ENST00000433368 FXR2P51116 673 aaKnown RBP eCLIP8.25□□□□□ -1.09
CRISP3-204ENST00000433368 FBLN2P98095 1184 aa8.23□□□□□ -1.09
CRISP3-204ENST00000433368 SPDYE2BA6NHP3 402 aa8.23□□□□□ -1.09
CRISP3-204ENST00000433368 SPDYE6P0CI01 402 aa8.23□□□□□ -1.09
CRISP3-204ENST00000433368 SPDYE2Q495Y8 402 aa8.23□□□□□ -1.09
CRISP3-204ENST00000433368 HAX1O00165 279 aa8.16□□□□□ -1.1
CRISP3-204ENST00000433368 EHMT2Q96KQ7 1210 aa8.14□□□□□ -1.11
CRISP3-204ENST00000433368 MKRN4PQ13434 485 aaPredicted RBP8.13□□□□□ -1.11
CRISP3-204ENST00000433368 SPDYE1Q8NFV5 336 aaPredicted RBP8.11□□□□□ -1.11
CRISP3-204ENST00000433368 SSUH2Q9Y2M2 353 aa8.1□□□□□ -1.11
CRISP3-204ENST00000433368 ZNF692Q9BU19 519 aaPredicted RBP8.09□□□□□ -1.11
CRISP3-204ENST00000433368 CLEC11AQ9Y240 323 aa8.06□□□□□ -1.12
CRISP3-204ENST00000433368 PRKAR2AP13861 404 aaKnown RBP8.05□□□□□ -1.12
CRISP3-204ENST00000433368 EVX2Q03828 476 aa8.05□□□□□ -1.12
CRISP3-204ENST00000433368 C19orf67A6NJJ6 358 aa7.99□□□□□ -1.13
CRISP3-204ENST00000433368 PABPN1Q86U42 306 aaKnown RBP eCLIP7.95□□□□□ -1.14
CRISP3-204ENST00000433368 PRR29P0C7W0 189 aa7.94□□□□□ -1.14
CRISP3-204ENST00000433368 CHADLQ6NUI6 762 aa7.91□□□□□ -1.14
CRISP3-204ENST00000433368 CSRNP3Q8WYN3 585 aa7.91□□□□□ -1.14
CRISP3-204ENST00000433368 GABBR2O75899 941 aa7.88□□□□□ -1.15
CRISP3-204ENST00000433368 FARP1Q9Y4F1 1045 aaPredicted RBP7.82□□□□□ -1.16
CRISP3-204ENST00000433368 CLCN6P51797 869 aa7.8□□□□□ -1.16
CRISP3-204ENST00000433368 CD44P16070 742 aaKnown RBP7.78□□□□□ -1.16
CRISP3-204ENST00000433368 STAG3Q9UJ98 1225 aa7.77□□□□□ -1.17
CRISP3-204ENST00000433368 LHX8Q68G74 356 aa7.76□□□□□ -1.17
CRISP3-204ENST00000433368 CREBZFQ9NS37 354 aa7.72□□□□□ -1.17
CRISP3-204ENST00000433368 POTEIP0CG38 1075 aa7.71□□□□□ -1.18
CRISP3-204ENST00000433368 SPDYE4A6NLX3 237 aa7.7□□□□□ -1.18
CRISP3-204ENST00000433368 ZNF579Q8NAF0 562 aaKnown RBP7.69□□□□□ -1.18
CRISP3-204ENST00000433368 ZRANB1Q9UGI0 708 aa7.66□□□□□ -1.18
CRISP3-204ENST00000433368 DCBLD2Q96PD2 775 aa7.64□□□□□ -1.19
CRISP3-204ENST00000433368 NPM1P06748 294 aaKnown RBP eCLIP7.6□□□□□ -1.19
CRISP3-204ENST00000433368 PAK3O75914 559 aaPredicted RBP7.59□□□□□ -1.19
CRISP3-204ENST00000433368 MNX1P50219 401 aaPredicted RBP7.57□□□□□ -1.2
CRISP3-204ENST00000433368 GALR2O43603 387 aaPredicted RBP7.56□□□□□ -1.2
CRISP3-204ENST00000433368 SLC24A1O60721 1099 aa7.54□□□□□ -1.2
CRISP3-204ENST00000433368 PROM2Q8N271 834 aa7.53□□□□□ -1.2
CRISP3-204ENST00000433368 PHF12Q96QT6 1004 aa7.52□□□□□ -1.21
CRISP3-204ENST00000433368 PCDH10Q9P2E7 1040 aa7.52□□□□□ -1.21
CRISP3-204ENST00000433368 OTUD5Q96G74 571 aa7.44□□□□□ -1.22
CRISP3-204ENST00000433368 POTEB2H3BUK9 544 aa7.44□□□□□ -1.22
CRISP3-204ENST00000433368 ASTLQ6HA08 431 aaPredicted RBP7.44□□□□□ -1.22
CRISP3-204ENST00000433368 PELP1Q8IZL8 1130 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms