RNA–Protein interactions for RNA: ENST00000430861.1

PCDH9-AS1-201, PCDH9 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene PCDH9-AS1, Length 532 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-AS1-201ENST00000430861 AEBP2Q6ZN18 517 aaPredicted RBP25.11■■□□□ 1.61
PCDH9-AS1-201ENST00000430861 CHIC1Q5VXU3 224 aa23.79■■□□□ 1.4
PCDH9-AS1-201ENST00000430861 SENP3Q9H4L4 574 aaPredicted RBP21.53■■□□□ 1.04
PCDH9-AS1-201ENST00000430861 PHF23Q9BUL5 403 aaPredicted RBP21.19■□□□□ 0.98
PCDH9-AS1-201ENST00000430861 FOXD1Q16676 465 aa20.02■□□□□ 0.8
PCDH9-AS1-201ENST00000430861 PLPPR3Q6T4P5 718 aa18.98■□□□□ 0.63
PCDH9-AS1-201ENST00000430861 MSH5O43196 834 aa18.85■□□□□ 0.61
PCDH9-AS1-201ENST00000430861 PIAS4Q8N2W9 510 aaPredicted RBP18.7■□□□□ 0.58
PCDH9-AS1-201ENST00000430861 PPP6R1Q9UPN7 881 aa18.59■□□□□ 0.57
PCDH9-AS1-201ENST00000430861 POTEDQ86YR6 584 aa18.55■□□□□ 0.56
PCDH9-AS1-201ENST00000430861 ADRA2BP18089 450 aa18.54■□□□□ 0.56
PCDH9-AS1-201ENST00000430861 SCAF1Q9H7N4 1312 aaKnown RBP17.08■□□□□ 0.32
PCDH9-AS1-201ENST00000430861 MAPK8IP2Q13387 824 aaPredicted RBP17.05■□□□□ 0.32
PCDH9-AS1-201ENST00000430861 DMRT2Q9Y5R5 561 aa17.03■□□□□ 0.32
PCDH9-AS1-201ENST00000430861 PPP4R3CPQ6ZMV5 832 aa16.59■□□□□ 0.25
PCDH9-AS1-201ENST00000430861 HOXD11P31277 338 aaPredicted RBP16.36■□□□□ 0.21
PCDH9-AS1-201ENST00000430861 CNKSR2Q8WXI2 1034 aa16.34■□□□□ 0.21
PCDH9-AS1-201ENST00000430861 DCAF8L1A6NGE4 600 aa16.33■□□□□ 0.2
PCDH9-AS1-201ENST00000430861 CACNB1Q02641 598 aaPredicted RBP16.23■□□□□ 0.19
PCDH9-AS1-201ENST00000430861 RNF216Q9NWF9 866 aaPredicted RBP16.22■□□□□ 0.19
PCDH9-AS1-201ENST00000430861 RNF39Q9H2S5 420 aa16.04■□□□□ 0.16
PCDH9-AS1-201ENST00000430861 NCBP3Q53F19 620 aaKnown RBP15.98■□□□□ 0.15
PCDH9-AS1-201ENST00000430861 DNAJC5BQ9UF47 199 aa15.89■□□□□ 0.13
PCDH9-AS1-201ENST00000430861 C1QBPQ07021 282 aaKnown RBP15.83■□□□□ 0.12
PCDH9-AS1-201ENST00000430861 NPM3O75607 178 aaKnown RBP15.67■□□□□ 0.1
PCDH9-AS1-201ENST00000430861 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.59■□□□□ 0.09
PCDH9-AS1-201ENST00000430861 KCNA4P22459 653 aa15.24■□□□□ 0.03
PCDH9-AS1-201ENST00000430861 U3KPZ7 1027 aaPredicted RBP15.23■□□□□ 0.03
PCDH9-AS1-201ENST00000430861 CAPN15O75808 1086 aa15.04■□□□□ -0
PCDH9-AS1-201ENST00000430861 SPINK5Q9NQ38 1064 aaPredicted RBP15.02■□□□□ -0
PCDH9-AS1-201ENST00000430861 SLC4A2P04920 1241 aa14.98□□□□□ -0.01
PCDH9-AS1-201ENST00000430861 DSG3P32926 999 aa14.97□□□□□ -0.01
PCDH9-AS1-201ENST00000430861 APLP2Q06481 763 aa14.9□□□□□ -0.02
PCDH9-AS1-201ENST00000430861 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.84□□□□□ -0.03
PCDH9-AS1-201ENST00000430861 HNRNPUL2Q1KMD3 747 aaKnown RBP14.84□□□□□ -0.03
PCDH9-AS1-201ENST00000430861 ZNF219Q9P2Y4 722 aaPredicted RBP14.78□□□□□ -0.04
PCDH9-AS1-201ENST00000430861 TRHP20396 242 aaPredicted RBP14.76□□□□□ -0.05
PCDH9-AS1-201ENST00000430861 SAMD1Q6SPF0 538 aaPredicted RBP14.72□□□□□ -0.05
PCDH9-AS1-201ENST00000430861 ABCB7O75027 752 aa14.64□□□□□ -0.07
PCDH9-AS1-201ENST00000430861 MYCNP04198 464 aaPredicted RBP14.55□□□□□ -0.08
PCDH9-AS1-201ENST00000430861 POTEHQ6S545 545 aa14.53□□□□□ -0.08
PCDH9-AS1-201ENST00000430861 SLC4A1APQ9BWU0 796 aaKnown RBP14.4□□□□□ -0.1
PCDH9-AS1-201ENST00000430861 RBM42Q9BTD8 480 aaKnown RBP14.36□□□□□ -0.11
PCDH9-AS1-201ENST00000430861 POLA2Q14181 598 aa14.33□□□□□ -0.12
PCDH9-AS1-201ENST00000430861 FOXD4L1Q9NU39 408 aa14.31□□□□□ -0.12
PCDH9-AS1-201ENST00000430861 ATF5Q9Y2D1 282 aaPredicted RBP14.13□□□□□ -0.15
PCDH9-AS1-201ENST00000430861 ZBTB12Q9Y330 459 aaPredicted RBP14.11□□□□□ -0.15
PCDH9-AS1-201ENST00000430861 CHRDL2Q6WN34 429 aa14.03□□□□□ -0.16
PCDH9-AS1-201ENST00000430861 AKT1S1Q96B36 256 aa13.98□□□□□ -0.17
PCDH9-AS1-201ENST00000430861 ZBTB22O15209 634 aa13.97□□□□□ -0.17
PCDH9-AS1-201ENST00000430861 ATXN8OSP0DMR3 200 aa13.93□□□□□ -0.18
PCDH9-AS1-201ENST00000430861 OSCARQ8IYS5 282 aa13.86□□□□□ -0.19
PCDH9-AS1-201ENST00000430861 REM2Q8IYK8 340 aaPredicted RBP13.81□□□□□ -0.2
PCDH9-AS1-201ENST00000430861 FBLN2P98095 1184 aa13.7□□□□□ -0.22
PCDH9-AS1-201ENST00000430861 PIP4P2Q8N4L2 257 aa13.66□□□□□ -0.22
PCDH9-AS1-201ENST00000430861 SPDYE2BA6NHP3 402 aa13.65□□□□□ -0.22
PCDH9-AS1-201ENST00000430861 PITPNM1O00562 1244 aa13.65□□□□□ -0.22
PCDH9-AS1-201ENST00000430861 SPDYE6P0CI01 402 aa13.65□□□□□ -0.22
PCDH9-AS1-201ENST00000430861 SPDYE2Q495Y8 402 aa13.65□□□□□ -0.22
PCDH9-AS1-201ENST00000430861 FXR2P51116 673 aaKnown RBP eCLIP13.58□□□□□ -0.24
PCDH9-AS1-201ENST00000430861 SP7Q8TDD2 431 aaPredicted RBP13.57□□□□□ -0.24
PCDH9-AS1-201ENST00000430861 MKRN4PQ13434 485 aaPredicted RBP13.49□□□□□ -0.25
PCDH9-AS1-201ENST00000430861 HAX1O00165 279 aa13.47□□□□□ -0.25
PCDH9-AS1-201ENST00000430861 SPDYE1Q8NFV5 336 aaPredicted RBP13.44□□□□□ -0.26
PCDH9-AS1-201ENST00000430861 ZNF692Q9BU19 519 aaPredicted RBP13.43□□□□□ -0.26
PCDH9-AS1-201ENST00000430861 SSUH2Q9Y2M2 353 aa13.41□□□□□ -0.26
PCDH9-AS1-201ENST00000430861 CLEC11AQ9Y240 323 aa13.37□□□□□ -0.27
PCDH9-AS1-201ENST00000430861 PRKAR2AP13861 404 aaKnown RBP13.31□□□□□ -0.28
PCDH9-AS1-201ENST00000430861 CSRNP3Q8WYN3 585 aa13.3□□□□□ -0.28
PCDH9-AS1-201ENST00000430861 EVX2Q03828 476 aa13.21□□□□□ -0.29
PCDH9-AS1-201ENST00000430861 PABPN1Q86U42 306 aaKnown RBP eCLIP13.21□□□□□ -0.29
PCDH9-AS1-201ENST00000430861 PRR29P0C7W0 189 aa13.16□□□□□ -0.3
PCDH9-AS1-201ENST00000430861 C19orf67A6NJJ6 358 aa13.15□□□□□ -0.3
PCDH9-AS1-201ENST00000430861 EHMT2Q96KQ7 1210 aa13.15□□□□□ -0.3
PCDH9-AS1-201ENST00000430861 CHADLQ6NUI6 762 aa13.1□□□□□ -0.31
PCDH9-AS1-201ENST00000430861 GABBR2O75899 941 aa12.97□□□□□ -0.33
PCDH9-AS1-201ENST00000430861 FARP1Q9Y4F1 1045 aaPredicted RBP12.93□□□□□ -0.34
PCDH9-AS1-201ENST00000430861 STAG3Q9UJ98 1225 aa12.9□□□□□ -0.34
PCDH9-AS1-201ENST00000430861 CD44P16070 742 aaKnown RBP12.89□□□□□ -0.35
PCDH9-AS1-201ENST00000430861 SPDYE4A6NLX3 237 aa12.84□□□□□ -0.35
PCDH9-AS1-201ENST00000430861 CLCN6P51797 869 aa12.83□□□□□ -0.36
PCDH9-AS1-201ENST00000430861 CREBZFQ9NS37 354 aa12.77□□□□□ -0.37
PCDH9-AS1-201ENST00000430861 LHX8Q68G74 356 aa12.72□□□□□ -0.37
PCDH9-AS1-201ENST00000430861 ZNF579Q8NAF0 562 aaKnown RBP12.7□□□□□ -0.38
PCDH9-AS1-201ENST00000430861 ZRANB1Q9UGI0 708 aa12.68□□□□□ -0.38
PCDH9-AS1-201ENST00000430861 POTEIP0CG38 1075 aa12.66□□□□□ -0.38
PCDH9-AS1-201ENST00000430861 DCBLD2Q96PD2 775 aa12.63□□□□□ -0.39
PCDH9-AS1-201ENST00000430861 PAK3O75914 559 aaPredicted RBP12.61□□□□□ -0.39
PCDH9-AS1-201ENST00000430861 NPM1P06748 294 aaKnown RBP eCLIP12.61□□□□□ -0.39
PCDH9-AS1-201ENST00000430861 MNX1P50219 401 aaPredicted RBP12.53□□□□□ -0.4
PCDH9-AS1-201ENST00000430861 PROM2Q8N271 834 aa12.51□□□□□ -0.41
PCDH9-AS1-201ENST00000430861 GALR2O43603 387 aaPredicted RBP12.5□□□□□ -0.41
PCDH9-AS1-201ENST00000430861 PHF12Q96QT6 1004 aa12.47□□□□□ -0.41
PCDH9-AS1-201ENST00000430861 PLEKHG5O94827 1062 aa12.33□□□□□ -0.44
PCDH9-AS1-201ENST00000430861 MS4A3Q96HJ5 214 aa12.31□□□□□ -0.44
PCDH9-AS1-201ENST00000430861 TSPYL2Q9H2G4 693 aaPredicted RBP12.3□□□□□ -0.44
PCDH9-AS1-201ENST00000430861 ASTLQ6HA08 431 aaPredicted RBP12.28□□□□□ -0.44
PCDH9-AS1-201ENST00000430861 MIER1Q8N108 512 aa12.27□□□□□ -0.45
PCDH9-AS1-201ENST00000430861 PELP1Q8IZL8 1130 aaKnown RBP12.26□□□□□ -0.45
PCDH9-AS1-201ENST00000430861 CCDC61Q9Y6R9 512 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms