RNA–Protein interactions for RNA: ENST00000429335.5

MTHFD2L-205, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like, humanhuman

TSL 1 (best)

Gene MTHFD2L, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2L-205ENST00000429335 AEBP2Q6ZN18 517 aaPredicted RBP24.09■■□□□ 1.45
MTHFD2L-205ENST00000429335 CHIC1Q5VXU3 224 aa23.66■■□□□ 1.38
MTHFD2L-205ENST00000429335 PHF23Q9BUL5 403 aaPredicted RBP20.79■□□□□ 0.92
MTHFD2L-205ENST00000429335 SENP3Q9H4L4 574 aaPredicted RBP20.48■□□□□ 0.87
MTHFD2L-205ENST00000429335 PLPPR3Q6T4P5 718 aa19.28■□□□□ 0.68
MTHFD2L-205ENST00000429335 FOXD1Q16676 465 aa18.95■□□□□ 0.62
MTHFD2L-205ENST00000429335 ADRA2BP18089 450 aa18.3■□□□□ 0.52
MTHFD2L-205ENST00000429335 PPP6R1Q9UPN7 881 aa18.3■□□□□ 0.52
MTHFD2L-205ENST00000429335 PIAS4Q8N2W9 510 aaPredicted RBP17.93■□□□□ 0.46
MTHFD2L-205ENST00000429335 MSH5O43196 834 aa17.48■□□□□ 0.39
MTHFD2L-205ENST00000429335 PPP4R3CPQ6ZMV5 832 aa16.98■□□□□ 0.31
MTHFD2L-205ENST00000429335 SCAF1Q9H7N4 1312 aaKnown RBP16.79■□□□□ 0.28
MTHFD2L-205ENST00000429335 KCNA4P22459 653 aa16.68■□□□□ 0.26
MTHFD2L-205ENST00000429335 NCBP3Q53F19 620 aaKnown RBP16.59■□□□□ 0.25
MTHFD2L-205ENST00000429335 MAPK8IP2Q13387 824 aaPredicted RBP16.56■□□□□ 0.24
MTHFD2L-205ENST00000429335 CNKSR2Q8WXI2 1034 aa16.5■□□□□ 0.23
MTHFD2L-205ENST00000429335 DMRT2Q9Y5R5 561 aa16.35■□□□□ 0.21
MTHFD2L-205ENST00000429335 NPM3O75607 178 aaKnown RBP16.32■□□□□ 0.2
MTHFD2L-205ENST00000429335 RNF216Q9NWF9 866 aaPredicted RBP16.15■□□□□ 0.18
MTHFD2L-205ENST00000429335 HOXD11P31277 338 aaPredicted RBP16.05■□□□□ 0.16
MTHFD2L-205ENST00000429335 SLC4A1APQ9BWU0 796 aaKnown RBP15.93■□□□□ 0.14
MTHFD2L-205ENST00000429335 DNAJC5BQ9UF47 199 aa15.85■□□□□ 0.13
MTHFD2L-205ENST00000429335 POTEDQ86YR6 584 aa15.71■□□□□ 0.11
MTHFD2L-205ENST00000429335 DCAF8L1A6NGE4 600 aa15.64■□□□□ 0.09
MTHFD2L-205ENST00000429335 EHMT2Q96KQ7 1210 aa15.58■□□□□ 0.08
MTHFD2L-205ENST00000429335 SLC4A2P04920 1241 aa15.37■□□□□ 0.05
MTHFD2L-205ENST00000429335 FOXD4L1Q9NU39 408 aa15.36■□□□□ 0.05
MTHFD2L-205ENST00000429335 ZBTB22O15209 634 aa15.35■□□□□ 0.05
MTHFD2L-205ENST00000429335 CSRNP3Q8WYN3 585 aa15.34■□□□□ 0.05
MTHFD2L-205ENST00000429335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.3■□□□□ 0.04
MTHFD2L-205ENST00000429335 MYCNP04198 464 aaPredicted RBP15.1■□□□□ 0.01
MTHFD2L-205ENST00000429335 U3KPZ7 1027 aaPredicted RBP15.06■□□□□ 0
MTHFD2L-205ENST00000429335 RNF39Q9H2S5 420 aa14.97□□□□□ -0.01
MTHFD2L-205ENST00000429335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.94□□□□□ -0.02
MTHFD2L-205ENST00000429335 HNRNPUL2Q1KMD3 747 aaKnown RBP14.94□□□□□ -0.02
MTHFD2L-205ENST00000429335 SAMD1Q6SPF0 538 aaPredicted RBP14.88□□□□□ -0.03
MTHFD2L-205ENST00000429335 ATXN8OSP0DMR3 200 aa14.83□□□□□ -0.04
MTHFD2L-205ENST00000429335 C1QBPQ07021 282 aaKnown RBP14.81□□□□□ -0.04
MTHFD2L-205ENST00000429335 APLP2Q06481 763 aa14.78□□□□□ -0.04
MTHFD2L-205ENST00000429335 ATF5Q9Y2D1 282 aaPredicted RBP14.65□□□□□ -0.06
MTHFD2L-205ENST00000429335 SPINK5Q9NQ38 1064 aaPredicted RBP14.59□□□□□ -0.07
MTHFD2L-205ENST00000429335 CAPN15O75808 1086 aa14.55□□□□□ -0.08
MTHFD2L-205ENST00000429335 ZNF219Q9P2Y4 722 aaPredicted RBP14.53□□□□□ -0.08
MTHFD2L-205ENST00000429335 CACNB1Q02641 598 aaPredicted RBP14.51□□□□□ -0.09
MTHFD2L-205ENST00000429335 TRHP20396 242 aaPredicted RBP14.5□□□□□ -0.09
MTHFD2L-205ENST00000429335 DSG3P32926 999 aa14.28□□□□□ -0.12
MTHFD2L-205ENST00000429335 POLA2Q14181 598 aa14.28□□□□□ -0.12
MTHFD2L-205ENST00000429335 ABCB7O75027 752 aa14.27□□□□□ -0.13
MTHFD2L-205ENST00000429335 ZBTB12Q9Y330 459 aaPredicted RBP14.1□□□□□ -0.15
MTHFD2L-205ENST00000429335 FBLN2P98095 1184 aa14.07□□□□□ -0.16
MTHFD2L-205ENST00000429335 MKRN4PQ13434 485 aaPredicted RBP14.02□□□□□ -0.17
MTHFD2L-205ENST00000429335 FKBP8Q14318 412 aa13.89□□□□□ -0.19
MTHFD2L-205ENST00000429335 OSCARQ8IYS5 282 aa13.81□□□□□ -0.2
MTHFD2L-205ENST00000429335 SPDYE4A6NLX3 237 aa13.78□□□□□ -0.2
MTHFD2L-205ENST00000429335 SPDYE2BA6NHP3 402 aa13.71□□□□□ -0.21
MTHFD2L-205ENST00000429335 SPDYE6P0CI01 402 aa13.71□□□□□ -0.21
MTHFD2L-205ENST00000429335 SPDYE2Q495Y8 402 aa13.71□□□□□ -0.21
MTHFD2L-205ENST00000429335 ZNF692Q9BU19 519 aaPredicted RBP13.66□□□□□ -0.22
MTHFD2L-205ENST00000429335 RBM42Q9BTD8 480 aaKnown RBP13.63□□□□□ -0.23
MTHFD2L-205ENST00000429335 SSUH2Q9Y2M2 353 aa13.6□□□□□ -0.23
MTHFD2L-205ENST00000429335 PROM2Q8N271 834 aa13.56□□□□□ -0.24
MTHFD2L-205ENST00000429335 PABPN1Q86U42 306 aaKnown RBP eCLIP13.48□□□□□ -0.25
MTHFD2L-205ENST00000429335 AKT1S1Q96B36 256 aa13.48□□□□□ -0.25
MTHFD2L-205ENST00000429335 FBXO3Q9UK99 471 aa13.4□□□□□ -0.26
MTHFD2L-205ENST00000429335 REM2Q8IYK8 340 aaPredicted RBP13.33□□□□□ -0.28
MTHFD2L-205ENST00000429335 STAG3Q9UJ98 1225 aa13.3□□□□□ -0.28
MTHFD2L-205ENST00000429335 SPDYE1Q8NFV5 336 aaPredicted RBP13.28□□□□□ -0.28
MTHFD2L-205ENST00000429335 CLEC11AQ9Y240 323 aa13.2□□□□□ -0.3
MTHFD2L-205ENST00000429335 VASPP50552 380 aaPredicted RBP13.19□□□□□ -0.3
MTHFD2L-205ENST00000429335 PITPNM1O00562 1244 aa13.18□□□□□ -0.3
MTHFD2L-205ENST00000429335 PRR29P0C7W0 189 aa13.1□□□□□ -0.31
MTHFD2L-205ENST00000429335 PLCD3Q8N3E9 789 aa13.06□□□□□ -0.32
MTHFD2L-205ENST00000429335 MIER1Q8N108 512 aa13.05□□□□□ -0.32
MTHFD2L-205ENST00000429335 PLEKHG5O94827 1062 aa13.02□□□□□ -0.33
MTHFD2L-205ENST00000429335 CHRDL2Q6WN34 429 aa13□□□□□ -0.33
MTHFD2L-205ENST00000429335 IFNLR1Q8IU57 520 aaPredicted RBP12.99□□□□□ -0.33
MTHFD2L-205ENST00000429335 CREBZFQ9NS37 354 aa12.95□□□□□ -0.34
MTHFD2L-205ENST00000429335 KLHL34Q8N239 644 aa12.94□□□□□ -0.34
MTHFD2L-205ENST00000429335 ZBTB47Q9UFB7 747 aaPredicted RBP12.94□□□□□ -0.34
MTHFD2L-205ENST00000429335 FXR2P51116 673 aaKnown RBP eCLIP12.91□□□□□ -0.34
MTHFD2L-205ENST00000429335 AMER1Q5JTC6 1135 aaPredicted RBP12.86□□□□□ -0.35
MTHFD2L-205ENST00000429335 CHADLQ6NUI6 762 aa12.86□□□□□ -0.35
MTHFD2L-205ENST00000429335 PIP4P2Q8N4L2 257 aa12.86□□□□□ -0.35
MTHFD2L-205ENST00000429335 PRKAR2AP13861 404 aaKnown RBP12.85□□□□□ -0.35
MTHFD2L-205ENST00000429335 SPOCK2Q92563 424 aa12.85□□□□□ -0.35
MTHFD2L-205ENST00000429335 MNX1P50219 401 aaPredicted RBP12.82□□□□□ -0.36
MTHFD2L-205ENST00000429335 NPM1P06748 294 aaKnown RBP eCLIP12.77□□□□□ -0.37
MTHFD2L-205ENST00000429335 RTN4Q9NQC3 1192 aaKnown RBP12.77□□□□□ -0.37
MTHFD2L-205ENST00000429335 FARP1Q9Y4F1 1045 aaPredicted RBP12.76□□□□□ -0.37
MTHFD2L-205ENST00000429335 NUBP1P53384 320 aa12.7□□□□□ -0.38
MTHFD2L-205ENST00000429335 FAM212AQ96EL1 285 aa12.63□□□□□ -0.39
MTHFD2L-205ENST00000429335 CIZ1Q9ULV3 898 aaPredicted RBP12.63□□□□□ -0.39
MTHFD2L-205ENST00000429335 GSE1Q14687 1217 aa12.62□□□□□ -0.39
MTHFD2L-205ENST00000429335 RASEFQ8IZ41 740 aa12.62□□□□□ -0.39
MTHFD2L-205ENST00000429335 PKD2Q13563 968 aa12.6□□□□□ -0.39
MTHFD2L-205ENST00000429335 DCAF8Q5TAQ9 597 aa12.59□□□□□ -0.39
MTHFD2L-205ENST00000429335 TRIM41Q8WV44 630 aa12.54□□□□□ -0.4
MTHFD2L-205ENST00000429335 PAK3O75914 559 aaPredicted RBP12.53□□□□□ -0.4
MTHFD2L-205ENST00000429335 TSPYL2Q9H2G4 693 aaPredicted RBP12.53□□□□□ -0.4
MTHFD2L-205ENST00000429335 ECM2O94769 699 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms