RNA–Protein interactions for RNA: ENST00000429219.1

IFNNP1-201, Transcript of interferon nu 1, pseudogene, humanhuman

BASIC

Gene IFNNP1, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFNNP1-201ENST00000429219 AEBP2Q6ZN18 517 aaPredicted RBP27.84■■■□□ 2.05
IFNNP1-201ENST00000429219 CHIC1Q5VXU3 224 aa26.05■■□□□ 1.76
IFNNP1-201ENST00000429219 SENP3Q9H4L4 574 aaPredicted RBP23.94■■□□□ 1.42
IFNNP1-201ENST00000429219 PHF23Q9BUL5 403 aaPredicted RBP23.47■■□□□ 1.35
IFNNP1-201ENST00000429219 POTEDQ86YR6 584 aa22.47■■□□□ 1.19
IFNNP1-201ENST00000429219 FOXD1Q16676 465 aa22.4■■□□□ 1.18
IFNNP1-201ENST00000429219 MSH5O43196 834 aa21.37■■□□□ 1.01
IFNNP1-201ENST00000429219 PIAS4Q8N2W9 510 aaPredicted RBP20.74■□□□□ 0.91
IFNNP1-201ENST00000429219 PLPPR3Q6T4P5 718 aa20.43■□□□□ 0.86
IFNNP1-201ENST00000429219 PPP6R1Q9UPN7 881 aa20.19■□□□□ 0.82
IFNNP1-201ENST00000429219 ADRA2BP18089 450 aa20.09■□□□□ 0.81
IFNNP1-201ENST00000429219 CACNB1Q02641 598 aaPredicted RBP18.95■□□□□ 0.62
IFNNP1-201ENST00000429219 DMRT2Q9Y5R5 561 aa18.81■□□□□ 0.6
IFNNP1-201ENST00000429219 MAPK8IP2Q13387 824 aaPredicted RBP18.74■□□□□ 0.59
IFNNP1-201ENST00000429219 SCAF1Q9H7N4 1312 aaKnown RBP18.43■□□□□ 0.54
IFNNP1-201ENST00000429219 DCAF8L1A6NGE4 600 aa18.16■□□□□ 0.5
IFNNP1-201ENST00000429219 RNF39Q9H2S5 420 aa18.12■□□□□ 0.49
IFNNP1-201ENST00000429219 PPP4R3CPQ6ZMV5 832 aa17.92■□□□□ 0.46
IFNNP1-201ENST00000429219 C1QBPQ07021 282 aaKnown RBP17.81■□□□□ 0.44
IFNNP1-201ENST00000429219 HOXD11P31277 338 aaPredicted RBP17.73■□□□□ 0.43
IFNNP1-201ENST00000429219 CNKSR2Q8WXI2 1034 aa17.55■□□□□ 0.4
IFNNP1-201ENST00000429219 POTEHQ6S545 545 aa17.44■□□□□ 0.38
IFNNP1-201ENST00000429219 NCBP3Q53F19 620 aaKnown RBP17.37■□□□□ 0.37
IFNNP1-201ENST00000429219 RNF216Q9NWF9 866 aaPredicted RBP17.36■□□□□ 0.37
IFNNP1-201ENST00000429219 DNAJC5BQ9UF47 199 aa17.3■□□□□ 0.36
IFNNP1-201ENST00000429219 NPM3O75607 178 aaKnown RBP17.08■□□□□ 0.32
IFNNP1-201ENST00000429219 KCNA4P22459 653 aa17.02■□□□□ 0.32
IFNNP1-201ENST00000429219 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.95■□□□□ 0.3
IFNNP1-201ENST00000429219 DSG3P32926 999 aa16.64■□□□□ 0.25
IFNNP1-201ENST00000429219 CAPN15O75808 1086 aa16.56■□□□□ 0.24
IFNNP1-201ENST00000429219 SPINK5Q9NQ38 1064 aaPredicted RBP16.5■□□□□ 0.23
IFNNP1-201ENST00000429219 U3KPZ7 1027 aaPredicted RBP16.44■□□□□ 0.22
IFNNP1-201ENST00000429219 SLC4A2P04920 1241 aa16.24■□□□□ 0.19
IFNNP1-201ENST00000429219 SLC4A1APQ9BWU0 796 aaKnown RBP16.15■□□□□ 0.18
IFNNP1-201ENST00000429219 ABCB7O75027 752 aa16.08■□□□□ 0.16
IFNNP1-201ENST00000429219 TRHP20396 242 aaPredicted RBP16.06■□□□□ 0.16
IFNNP1-201ENST00000429219 ZNF219Q9P2Y4 722 aaPredicted RBP15.99■□□□□ 0.15
IFNNP1-201ENST00000429219 CHRDL2Q6WN34 429 aa15.96■□□□□ 0.15
IFNNP1-201ENST00000429219 RBM42Q9BTD8 480 aaKnown RBP15.94■□□□□ 0.14
IFNNP1-201ENST00000429219 APLP2Q06481 763 aa15.93■□□□□ 0.14
IFNNP1-201ENST00000429219 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.9■□□□□ 0.14
IFNNP1-201ENST00000429219 HNRNPUL2Q1KMD3 747 aaKnown RBP15.9■□□□□ 0.14
IFNNP1-201ENST00000429219 SP7Q8TDD2 431 aaPredicted RBP15.89■□□□□ 0.13
IFNNP1-201ENST00000429219 FOXD4L1Q9NU39 408 aa15.82■□□□□ 0.12
IFNNP1-201ENST00000429219 MYCNP04198 464 aaPredicted RBP15.81■□□□□ 0.12
IFNNP1-201ENST00000429219 SAMD1Q6SPF0 538 aaPredicted RBP15.8■□□□□ 0.12
IFNNP1-201ENST00000429219 ZBTB22O15209 634 aa15.66■□□□□ 0.1
IFNNP1-201ENST00000429219 ATXN8OSP0DMR3 200 aa15.4■□□□□ 0.06
IFNNP1-201ENST00000429219 HAX1O00165 279 aa15.38■□□□□ 0.05
IFNNP1-201ENST00000429219 POLA2Q14181 598 aa15.38■□□□□ 0.05
IFNNP1-201ENST00000429219 PIP4P2Q8N4L2 257 aa15.36■□□□□ 0.05
IFNNP1-201ENST00000429219 ATF5Q9Y2D1 282 aaPredicted RBP15.36■□□□□ 0.05
IFNNP1-201ENST00000429219 AKT1S1Q96B36 256 aa15.35■□□□□ 0.05
IFNNP1-201ENST00000429219 CSRNP3Q8WYN3 585 aa15.27■□□□□ 0.04
IFNNP1-201ENST00000429219 REM2Q8IYK8 340 aaPredicted RBP15.21■□□□□ 0.03
IFNNP1-201ENST00000429219 EHMT2Q96KQ7 1210 aa15.12■□□□□ 0.01
IFNNP1-201ENST00000429219 FXR2P51116 673 aaKnown RBP eCLIP15.1■□□□□ 0.01
IFNNP1-201ENST00000429219 PITPNM1O00562 1244 aa15.06■□□□□ 0
IFNNP1-201ENST00000429219 EVX2Q03828 476 aa15.06■□□□□ 0
IFNNP1-201ENST00000429219 ZBTB12Q9Y330 459 aaPredicted RBP15.05■□□□□ -0
IFNNP1-201ENST00000429219 OSCARQ8IYS5 282 aa14.95□□□□□ -0.02
IFNNP1-201ENST00000429219 LHX8Q68G74 356 aa14.9□□□□□ -0.02
IFNNP1-201ENST00000429219 PLSCR2Q9NRY7 297 aa14.8□□□□□ -0.04
IFNNP1-201ENST00000429219 FBLN2P98095 1184 aa14.78□□□□□ -0.04
IFNNP1-201ENST00000429219 MKRN4PQ13434 485 aaPredicted RBP14.71□□□□□ -0.05
IFNNP1-201ENST00000429219 GABBR2O75899 941 aa14.69□□□□□ -0.06
IFNNP1-201ENST00000429219 PRKAR2AP13861 404 aaKnown RBP14.67□□□□□ -0.06
IFNNP1-201ENST00000429219 C19orf67A6NJJ6 358 aa14.66□□□□□ -0.06
IFNNP1-201ENST00000429219 SPDYE2BA6NHP3 402 aa14.61□□□□□ -0.07
IFNNP1-201ENST00000429219 SPDYE6P0CI01 402 aa14.61□□□□□ -0.07
IFNNP1-201ENST00000429219 SPDYE2Q495Y8 402 aa14.61□□□□□ -0.07
IFNNP1-201ENST00000429219 CLEC11AQ9Y240 323 aa14.5□□□□□ -0.09
IFNNP1-201ENST00000429219 SPDYE1Q8NFV5 336 aaPredicted RBP14.46□□□□□ -0.09
IFNNP1-201ENST00000429219 SSUH2Q9Y2M2 353 aa14.46□□□□□ -0.09
IFNNP1-201ENST00000429219 ZNF692Q9BU19 519 aaPredicted RBP14.43□□□□□ -0.1
IFNNP1-201ENST00000429219 POTEIP0CG38 1075 aa14.35□□□□□ -0.11
IFNNP1-201ENST00000429219 CHADLQ6NUI6 762 aa14.3□□□□□ -0.12
IFNNP1-201ENST00000429219 PABPN1Q86U42 306 aaKnown RBP eCLIP14.21□□□□□ -0.13
IFNNP1-201ENST00000429219 SPDYE4A6NLX3 237 aa14.17□□□□□ -0.14
IFNNP1-201ENST00000429219 CD44P16070 742 aaKnown RBP14.16□□□□□ -0.14
IFNNP1-201ENST00000429219 CLCN6P51797 869 aa14.14□□□□□ -0.15
IFNNP1-201ENST00000429219 DCBLD2Q96PD2 775 aa14.14□□□□□ -0.15
IFNNP1-201ENST00000429219 PRR29P0C7W0 189 aa14.11□□□□□ -0.15
IFNNP1-201ENST00000429219 POTEMA6NI47 508 aa14.09□□□□□ -0.15
IFNNP1-201ENST00000429219 OTUD5Q96G74 571 aa14.02□□□□□ -0.17
IFNNP1-201ENST00000429219 POTEGQ6S5H5 508 aa14.01□□□□□ -0.17
IFNNP1-201ENST00000429219 PROM2Q8N271 834 aa13.99□□□□□ -0.17
IFNNP1-201ENST00000429219 STAG3Q9UJ98 1225 aa13.98□□□□□ -0.17
IFNNP1-201ENST00000429219 FARP1Q9Y4F1 1045 aaPredicted RBP13.98□□□□□ -0.17
IFNNP1-201ENST00000429219 PCDH10Q9P2E7 1040 aa13.9□□□□□ -0.18
IFNNP1-201ENST00000429219 ZNF579Q8NAF0 562 aaKnown RBP13.88□□□□□ -0.19
IFNNP1-201ENST00000429219 POTEB2H3BUK9 544 aa13.86□□□□□ -0.19
IFNNP1-201ENST00000429219 ZRANB1Q9UGI0 708 aa13.81□□□□□ -0.2
IFNNP1-201ENST00000429219 GALR2O43603 387 aaPredicted RBP13.78□□□□□ -0.2
IFNNP1-201ENST00000429219 FKBP8Q14318 412 aa13.76□□□□□ -0.21
IFNNP1-201ENST00000429219 CREBZFQ9NS37 354 aa13.74□□□□□ -0.21
IFNNP1-201ENST00000429219 MNX1P50219 401 aaPredicted RBP13.58□□□□□ -0.24
IFNNP1-201ENST00000429219 PELP1Q8IZL8 1130 aaKnown RBP13.58□□□□□ -0.24
IFNNP1-201ENST00000429219 LCE2DQ5TA82 110 aaPredicted RBP13.54□□□□□ -0.24
IFNNP1-201ENST00000429219 MAMSTRQ6ZN01 415 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms