RNA–Protein interactions for RNA: ENST00000428554.6

CCDC30-203, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 3,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-203ENST00000428554 AEBP2Q6ZN18 517 aaPredicted RBP11.4□□□□□ -0.58
CCDC30-203ENST00000428554 CHIC1Q5VXU3 224 aa11.11□□□□□ -0.63
CCDC30-203ENST00000428554 PHF23Q9BUL5 403 aaPredicted RBP9.79□□□□□ -0.84
CCDC30-203ENST00000428554 SENP3Q9H4L4 574 aaPredicted RBP9.73□□□□□ -0.85
CCDC30-203ENST00000428554 PLPPR3Q6T4P5 718 aa9.03□□□□□ -0.96
CCDC30-203ENST00000428554 FOXD1Q16676 465 aa9□□□□□ -0.97
CCDC30-203ENST00000428554 POTEDQ86YR6 584 aa8.76□□□□□ -1.01
CCDC30-203ENST00000428554 PPP6R1Q9UPN7 881 aa8.6□□□□□ -1.03
CCDC30-203ENST00000428554 ADRA2BP18089 450 aa8.6□□□□□ -1.03
CCDC30-203ENST00000428554 PIAS4Q8N2W9 510 aaPredicted RBP8.49□□□□□ -1.05
CCDC30-203ENST00000428554 MSH5O43196 834 aa8.36□□□□□ -1.07
CCDC30-203ENST00000428554 KCNA4P22459 653 aa8.17□□□□□ -1.1
CCDC30-203ENST00000428554 PPP4R3CPQ6ZMV5 832 aa8.03□□□□□ -1.12
CCDC30-203ENST00000428554 SCAF1Q9H7N4 1312 aaKnown RBP7.93□□□□□ -1.14
CCDC30-203ENST00000428554 EHMT2Q96KQ7 1210 aa7.9□□□□□ -1.14
CCDC30-203ENST00000428554 NCBP3Q53F19 620 aaKnown RBP7.82□□□□□ -1.16
CCDC30-203ENST00000428554 MAPK8IP2Q13387 824 aaPredicted RBP7.81□□□□□ -1.16
CCDC30-203ENST00000428554 NPM3O75607 178 aaKnown RBP7.79□□□□□ -1.16
CCDC30-203ENST00000428554 SLC4A1APQ9BWU0 796 aaKnown RBP7.78□□□□□ -1.16
CCDC30-203ENST00000428554 SLC24A1O60721 1099 aa7.75□□□□□ -1.17
CCDC30-203ENST00000428554 DMRT2Q9Y5R5 561 aa7.75□□□□□ -1.17
CCDC30-203ENST00000428554 CNKSR2Q8WXI2 1034 aa7.73□□□□□ -1.17
CCDC30-203ENST00000428554 CSRNP3Q8WYN3 585 aa7.69□□□□□ -1.18
CCDC30-203ENST00000428554 RNF216Q9NWF9 866 aaPredicted RBP7.59□□□□□ -1.19
CCDC30-203ENST00000428554 HOXD11P31277 338 aaPredicted RBP7.57□□□□□ -1.2
CCDC30-203ENST00000428554 ZBTB22O15209 634 aa7.56□□□□□ -1.2
CCDC30-203ENST00000428554 DNAJC5BQ9UF47 199 aa7.45□□□□□ -1.22
CCDC30-203ENST00000428554 DCAF8L1A6NGE4 600 aa7.41□□□□□ -1.22
CCDC30-203ENST00000428554 FOXD4L1Q9NU39 408 aa7.39□□□□□ -1.23
CCDC30-203ENST00000428554 SLC4A2P04920 1241 aa7.32□□□□□ -1.24
CCDC30-203ENST00000428554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.21□□□□□ -1.25
CCDC30-203ENST00000428554 CACNB1Q02641 598 aaPredicted RBP7.19□□□□□ -1.26
CCDC30-203ENST00000428554 MYCNP04198 464 aaPredicted RBP7.14□□□□□ -1.27
CCDC30-203ENST00000428554 RNF39Q9H2S5 420 aa7.14□□□□□ -1.27
CCDC30-203ENST00000428554 U3KPZ7 1027 aaPredicted RBP7.07□□□□□ -1.28
CCDC30-203ENST00000428554 C1QBPQ07021 282 aaKnown RBP7.07□□□□□ -1.28
CCDC30-203ENST00000428554 ATXN8OSP0DMR3 200 aa7.07□□□□□ -1.28
CCDC30-203ENST00000428554 AMER1Q5JTC6 1135 aaPredicted RBP7.06□□□□□ -1.28
CCDC30-203ENST00000428554 ATF5Q9Y2D1 282 aaPredicted RBP7.04□□□□□ -1.28
CCDC30-203ENST00000428554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.02□□□□□ -1.29
CCDC30-203ENST00000428554 HNRNPUL2Q1KMD3 747 aaKnown RBP7.02□□□□□ -1.29
CCDC30-203ENST00000428554 RTN4Q9NQC3 1192 aaKnown RBP7.01□□□□□ -1.29
CCDC30-203ENST00000428554 SAMD1Q6SPF0 538 aaPredicted RBP6.98□□□□□ -1.29
CCDC30-203ENST00000428554 DAXXQ9UER7 740 aaPredicted RBP6.97□□□□□ -1.29
CCDC30-203ENST00000428554 APLP2Q06481 763 aa6.96□□□□□ -1.29
CCDC30-203ENST00000428554 FKBP8Q14318 412 aa6.91□□□□□ -1.3
CCDC30-203ENST00000428554 SPINK5Q9NQ38 1064 aaPredicted RBP6.88□□□□□ -1.31
CCDC30-203ENST00000428554 CAPN15O75808 1086 aa6.87□□□□□ -1.31
CCDC30-203ENST00000428554 ZNF219Q9P2Y4 722 aaPredicted RBP6.85□□□□□ -1.31
CCDC30-203ENST00000428554 TRHP20396 242 aaPredicted RBP6.82□□□□□ -1.32
CCDC30-203ENST00000428554 DSG3P32926 999 aa6.77□□□□□ -1.33
CCDC30-203ENST00000428554 POTEHQ6S545 545 aa6.77□□□□□ -1.33
CCDC30-203ENST00000428554 ABCB7O75027 752 aa6.72□□□□□ -1.33
CCDC30-203ENST00000428554 MKRN4PQ13434 485 aaPredicted RBP6.72□□□□□ -1.33
CCDC30-203ENST00000428554 POLA2Q14181 598 aa6.71□□□□□ -1.34
CCDC30-203ENST00000428554 ARXQ96QS3 562 aa6.7□□□□□ -1.34
CCDC30-203ENST00000428554 SPDYE4A6NLX3 237 aa6.64□□□□□ -1.35
CCDC30-203ENST00000428554 ZBTB12Q9Y330 459 aaPredicted RBP6.63□□□□□ -1.35
CCDC30-203ENST00000428554 FBLN2P98095 1184 aa6.6□□□□□ -1.35
CCDC30-203ENST00000428554 PROM2Q8N271 834 aa6.57□□□□□ -1.36
CCDC30-203ENST00000428554 PRKCSHP14314 528 aaPredicted RBP6.56□□□□□ -1.36
CCDC30-203ENST00000428554 TAOK2Q9UL54 1235 aa6.53□□□□□ -1.36
CCDC30-203ENST00000428554 BCANQ96GW7 911 aa6.53□□□□□ -1.36
CCDC30-203ENST00000428554 DNAJC5Q9H3Z4 198 aa6.53□□□□□ -1.36
CCDC30-203ENST00000428554 FBXO3Q9UK99 471 aa6.51□□□□□ -1.37
CCDC30-203ENST00000428554 RBM42Q9BTD8 480 aaKnown RBP6.48□□□□□ -1.37
CCDC30-203ENST00000428554 TTBK1Q5TCY1 1321 aaPredicted RBP6.48□□□□□ -1.37
CCDC30-203ENST00000428554 VASPP50552 380 aaPredicted RBP6.48□□□□□ -1.37
CCDC30-203ENST00000428554 TIMELESSQ9UNS1 1208 aa6.48□□□□□ -1.37
CCDC30-203ENST00000428554 OSCARQ8IYS5 282 aa6.48□□□□□ -1.37
CCDC30-203ENST00000428554 IFNLR1Q8IU57 520 aaPredicted RBP6.45□□□□□ -1.38
CCDC30-203ENST00000428554 ERICH6Q7L0X2 663 aa6.44□□□□□ -1.38
CCDC30-203ENST00000428554 PLCB2Q00722 1185 aa6.44□□□□□ -1.38
CCDC30-203ENST00000428554 SPDYE2BA6NHP3 402 aa6.43□□□□□ -1.38
CCDC30-203ENST00000428554 SPDYE6P0CI01 402 aa6.43□□□□□ -1.38
CCDC30-203ENST00000428554 SPDYE2Q495Y8 402 aa6.43□□□□□ -1.38
CCDC30-203ENST00000428554 HOMEZQ8IX15 550 aa6.43□□□□□ -1.38
CCDC30-203ENST00000428554 ZNF692Q9BU19 519 aaPredicted RBP6.42□□□□□ -1.38
CCDC30-203ENST00000428554 SSUH2Q9Y2M2 353 aa6.39□□□□□ -1.39
CCDC30-203ENST00000428554 AKT1S1Q96B36 256 aa6.38□□□□□ -1.39
CCDC30-203ENST00000428554 PABPN1Q86U42 306 aaKnown RBP eCLIP6.36□□□□□ -1.39
CCDC30-203ENST00000428554 PELP1Q8IZL8 1130 aaKnown RBP6.36□□□□□ -1.39
CCDC30-203ENST00000428554 TULP1O00294 542 aaPredicted RBP6.36□□□□□ -1.39
CCDC30-203ENST00000428554 TPRNQ4KMQ1 711 aa6.34□□□□□ -1.39
CCDC30-203ENST00000428554 MYT1Q01538 1121 aa6.34□□□□□ -1.4
CCDC30-203ENST00000428554 PKD2Q13563 968 aa6.33□□□□□ -1.4
CCDC30-203ENST00000428554 RANGAP1P46060 587 aaPredicted RBP6.32□□□□□ -1.4
CCDC30-203ENST00000428554 VSIG10Q8N0Z9 540 aa6.31□□□□□ -1.4
CCDC30-203ENST00000428554 REM2Q8IYK8 340 aaPredicted RBP6.31□□□□□ -1.4
CCDC30-203ENST00000428554 KLHL34Q8N239 644 aa6.3□□□□□ -1.4
CCDC30-203ENST00000428554 GTF3C3Q9Y5Q9 886 aa6.3□□□□□ -1.4
CCDC30-203ENST00000428554 STAG3Q9UJ98 1225 aa6.29□□□□□ -1.4
CCDC30-203ENST00000428554 PLCD3Q8N3E9 789 aa6.27□□□□□ -1.41
CCDC30-203ENST00000428554 SPOCK2Q92563 424 aa6.27□□□□□ -1.41
CCDC30-203ENST00000428554 DCAF8L2P0C7V8 631 aa6.27□□□□□ -1.41
CCDC30-203ENST00000428554 MIER1Q8N108 512 aa6.27□□□□□ -1.41
CCDC30-203ENST00000428554 SPDYE1Q8NFV5 336 aaPredicted RBP6.25□□□□□ -1.41
CCDC30-203ENST00000428554 HAP1P54257 671 aaPredicted RBP6.25□□□□□ -1.41
CCDC30-203ENST00000428554 PITPNM1O00562 1244 aa6.23□□□□□ -1.41
CCDC30-203ENST00000428554 ECM2O94769 699 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms