RNA–Protein interactions for RNA: ENST00000427902.5

ZEB2-206, Transcript of zinc finger E-box binding homeobox 2, humanhuman

TSL 1 (best)

Gene ZEB2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-206ENST00000427902 NISCHQ9Y2I1 1504 aa16.11■□□□□ 0.17
ZEB2-206ENST00000427902 SHROOM4Q9ULL8 1493 aa14□□□□□ -0.17
ZEB2-206ENST00000427902 SUPT5HO00267 1087 aaKnown RBP13.72□□□□□ -0.21
ZEB2-206ENST00000427902 ZCCHC6Q5VYS8 1495 aaKnown RBP13.62□□□□□ -0.23
ZEB2-206ENST00000427902 CCDC180Q9P1Z9 1646 aa13.6□□□□□ -0.23
ZEB2-206ENST00000427902 DCAF8L2P0C7V8 631 aa13.59□□□□□ -0.23
ZEB2-206ENST00000427902 MYO15BQ96JP2 1530 aa13.28□□□□□ -0.28
ZEB2-206ENST00000427902 CHIC1Q5VXU3 224 aa13.25□□□□□ -0.29
ZEB2-206ENST00000427902 DCAF1Q9Y4B6 1507 aa13.09□□□□□ -0.31
ZEB2-206ENST00000427902 PCGF6Q9BYE7 350 aa12.99□□□□□ -0.33
ZEB2-206ENST00000427902 LOC105371045A0A1W2PR82 267 aa12.97□□□□□ -0.33
ZEB2-206ENST00000427902 SCRIBQ14160 1630 aa12.94□□□□□ -0.34
ZEB2-206ENST00000427902 HRCP23327 699 aa12.91□□□□□ -0.34
ZEB2-206ENST00000427902 ABCC9O60706 1549 aa12.88□□□□□ -0.35
ZEB2-206ENST00000427902 PPARGC1BQ86YN6 1023 aaKnown RBP12.8□□□□□ -0.36
ZEB2-206ENST00000427902 RSF1Q96T23 1441 aaPredicted RBP12.8□□□□□ -0.36
ZEB2-206ENST00000427902 RB1CC1Q8TDY2 1594 aa12.73□□□□□ -0.37
ZEB2-206ENST00000427902 FAM9AQ8IZU1 332 aaPredicted RBP12.72□□□□□ -0.37
ZEB2-206ENST00000427902 EHMT2Q96KQ7 1210 aa12.72□□□□□ -0.37
ZEB2-206ENST00000427902 TRIM41Q8WV44 630 aa12.7□□□□□ -0.38
ZEB2-206ENST00000427902 CECR2Q9BXF3 1484 aa12.65□□□□□ -0.38
ZEB2-206ENST00000427902 TRIM26Q12899 539 aaPredicted RBP12.61□□□□□ -0.39
ZEB2-206ENST00000427902 MROH2BQ7Z745 1585 aa12.59□□□□□ -0.39
ZEB2-206ENST00000427902 NACADO15069 1562 aa12.58□□□□□ -0.4
ZEB2-206ENST00000427902 WIZO95785 1651 aa12.56□□□□□ -0.4
ZEB2-206ENST00000427902 BAZ1AQ9NRL2 1556 aaPredicted RBP12.39□□□□□ -0.43
ZEB2-206ENST00000427902 ABCC8Q09428 1581 aa12.33□□□□□ -0.44
ZEB2-206ENST00000427902 UNC13AQ9UPW8 1703 aa12.31□□□□□ -0.44
ZEB2-206ENST00000427902 EIF4G1Q04637 1599 aaKnown RBP12.31□□□□□ -0.44
ZEB2-206ENST00000427902 TTBK1Q5TCY1 1321 aaPredicted RBP12.3□□□□□ -0.44
ZEB2-206ENST00000427902 SMARCA4P51532 1647 aa12.28□□□□□ -0.44
ZEB2-206ENST00000427902 ZEB1P37275 1124 aaPredicted RBP12.27□□□□□ -0.45
ZEB2-206ENST00000427902 PABPN1Q86U42 306 aaKnown RBP eCLIP12.27□□□□□ -0.45
ZEB2-206ENST00000427902 CCDC88BA6NC98 1476 aa12.26□□□□□ -0.45
ZEB2-206ENST00000427902 TOP2AP11388 1531 aaKnown RBP12.26□□□□□ -0.45
ZEB2-206ENST00000427902 SMARCA2P51531 1590 aa12.23□□□□□ -0.45
ZEB2-206ENST00000427902 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.22□□□□□ -0.45
ZEB2-206ENST00000427902 SOGA1O94964 1423 aa12.2□□□□□ -0.46
ZEB2-206ENST00000427902 RUSC2Q8N2Y8 1516 aa12.16□□□□□ -0.46
ZEB2-206ENST00000427902 CCER1Q8TC90 406 aaPredicted RBP12.14□□□□□ -0.47
ZEB2-206ENST00000427902 CEP162Q5TB80 1403 aa12.12□□□□□ -0.47
ZEB2-206ENST00000427902 UBTFP17480 764 aaKnown RBP12.12□□□□□ -0.47
ZEB2-206ENST00000427902 BICRAQ9NZM4 1560 aa12.1□□□□□ -0.47
ZEB2-206ENST00000427902 CSRNP3Q8WYN3 585 aa12.07□□□□□ -0.48
ZEB2-206ENST00000427902 TNIKQ9UKE5 1360 aa12.03□□□□□ -0.48
ZEB2-206ENST00000427902 WRNQ14191 1432 aaPredicted RBP eCLIP12.02□□□□□ -0.48
ZEB2-206ENST00000427902 RANGAP1P46060 587 aaPredicted RBP12.02□□□□□ -0.49
ZEB2-206ENST00000427902 AEBP2Q6ZN18 517 aaPredicted RBP12.01□□□□□ -0.49
ZEB2-206ENST00000427902 SYNJ1O43426 1573 aa12□□□□□ -0.49
ZEB2-206ENST00000427902 SCAF1Q9H7N4 1312 aaKnown RBP11.99□□□□□ -0.49
ZEB2-206ENST00000427902 GOLGA3Q08378 1498 aa11.98□□□□□ -0.49
ZEB2-206ENST00000427902 EEA1Q15075 1411 aa11.97□□□□□ -0.49
ZEB2-206ENST00000427902 PEG3Q9GZU2 1588 aa11.95□□□□□ -0.5
ZEB2-206ENST00000427902 ATAD2BQ9ULI0 1458 aa11.94□□□□□ -0.5
ZEB2-206ENST00000427902 BAZ1BQ9UIG0 1483 aaKnown RBP11.94□□□□□ -0.5
ZEB2-206ENST00000427902 HNRNPUL2Q1KMD3 747 aaKnown RBP11.91□□□□□ -0.5
ZEB2-206ENST00000427902 DIEXFQ68CQ4 756 aaKnown RBP11.91□□□□□ -0.5
ZEB2-206ENST00000427902 CEP164Q9UPV0 1460 aa11.89□□□□□ -0.51
ZEB2-206ENST00000427902 CLIP1P30622 1438 aa11.88□□□□□ -0.51
ZEB2-206ENST00000427902 RAPGEF2Q9Y4G8 1499 aa11.88□□□□□ -0.51
ZEB2-206ENST00000427902 KIF21BO75037 1637 aa11.86□□□□□ -0.51
ZEB2-206ENST00000427902 NEUROD1Q13562 356 aa11.85□□□□□ -0.51
ZEB2-206ENST00000427902 APLP2Q06481 763 aa11.81□□□□□ -0.52
ZEB2-206ENST00000427902 ACIN1Q9UKV3 1341 aaKnown RBP11.81□□□□□ -0.52
ZEB2-206ENST00000427902 VPS8Q8N3P4 1428 aa11.8□□□□□ -0.52
ZEB2-206ENST00000427902 TOP2BQ02880 1626 aa11.78□□□□□ -0.52
ZEB2-206ENST00000427902 ZNF316A6NFI3 1004 aaPredicted RBP11.76□□□□□ -0.53
ZEB2-206ENST00000427902 YTHDC1Q96MU7 727 aaKnown RBP11.76□□□□□ -0.53
ZEB2-206ENST00000427902 GTF3C3Q9Y5Q9 886 aa11.74□□□□□ -0.53
ZEB2-206ENST00000427902 BIVM-ERCC5R4GMW8 1640 aa11.73□□□□□ -0.53
ZEB2-206ENST00000427902 CENPBP07199 599 aaPredicted RBP11.7□□□□□ -0.54
ZEB2-206ENST00000427902 KANK4Q5T7N3 995 aaPredicted RBP11.7□□□□□ -0.54
ZEB2-206ENST00000427902 CUX1P39880 1505 aa11.7□□□□□ -0.54
ZEB2-206ENST00000427902 ARAP1Q96P48 1450 aa11.68□□□□□ -0.54
ZEB2-206ENST00000427902 MIER1Q8N108 512 aa11.67□□□□□ -0.54
ZEB2-206ENST00000427902 PRXQ9BXM0 1461 aa11.67□□□□□ -0.54
ZEB2-206ENST00000427902 NCAPD3P42695 1498 aa11.65□□□□□ -0.54
ZEB2-206ENST00000427902 HMGXB3Q12766 1538 aa11.64□□□□□ -0.55
ZEB2-206ENST00000427902 ERICH3Q5RHP9 1530 aa11.64□□□□□ -0.55
ZEB2-206ENST00000427902 ITGAEP38570 1179 aa11.63□□□□□ -0.55
ZEB2-206ENST00000427902 KIF27Q86VH2 1401 aa11.62□□□□□ -0.55
ZEB2-206ENST00000427902 CFTRP13569 1480 aa11.6□□□□□ -0.55
ZEB2-206ENST00000427902 PELP1Q8IZL8 1130 aaKnown RBP11.59□□□□□ -0.55
ZEB2-206ENST00000427902 DHX57Q6P158 1386 aaKnown RBP11.58□□□□□ -0.56
ZEB2-206ENST00000427902 ARHGAP35Q9NRY4 1499 aa11.57□□□□□ -0.56
ZEB2-206ENST00000427902 CUX2O14529 1486 aa11.55□□□□□ -0.56
ZEB2-206ENST00000427902 SLC24A1O60721 1099 aa11.54□□□□□ -0.56
ZEB2-206ENST00000427902 P3H3Q8IVL6 736 aa11.52□□□□□ -0.56
ZEB2-206ENST00000427902 IGF1RP08069 1367 aa11.51□□□□□ -0.57
ZEB2-206ENST00000427902 ATP1B4Q9UN42 357 aaPredicted RBP11.51□□□□□ -0.57
ZEB2-206ENST00000427902 RRBP1Q9P2E9 1410 aaKnown RBP11.51□□□□□ -0.57
ZEB2-206ENST00000427902 CCNB3Q8WWL7 1395 aa11.5□□□□□ -0.57
ZEB2-206ENST00000427902 PRDM2Q13029 1718 aa11.5□□□□□ -0.57
ZEB2-206ENST00000427902 FGD5Q6ZNL6 1462 aa11.5□□□□□ -0.57
ZEB2-206ENST00000427902 CADPSQ9ULU8 1353 aa11.48□□□□□ -0.57
ZEB2-206ENST00000427902 CARMIL1Q5VZK9 1371 aa11.47□□□□□ -0.57
ZEB2-206ENST00000427902 CLSPNQ9HAW4 1339 aa11.45□□□□□ -0.58
ZEB2-206ENST00000427902 FAM50AQ14320 339 aaKnown RBP11.44□□□□□ -0.58
ZEB2-206ENST00000427902 RAB3GAP2Q9H2M9 1393 aa11.44□□□□□ -0.58
ZEB2-206ENST00000427902 TIAM1Q13009 1591 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms