RNA–Protein interactions for RNA: ENST00000426347.5

AC004890.2-201, humanhuman

TSL 5 BASIC

Gene AC004890.2, Length 2,419 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004890.2-201ENST00000426347 NISCHQ9Y2I1 1504 aa35.97■■■■□ 3.35
AC004890.2-201ENST00000426347 SHROOM4Q9ULL8 1493 aa31.04■■■□□ 2.56
AC004890.2-201ENST00000426347 SUPT5HO00267 1087 aaKnown RBP30.5■■■□□ 2.47
AC004890.2-201ENST00000426347 ZCCHC6Q5VYS8 1495 aaKnown RBP30.4■■■□□ 2.46
AC004890.2-201ENST00000426347 CCDC180Q9P1Z9 1646 aa30.35■■■□□ 2.45
AC004890.2-201ENST00000426347 DCAF8L2P0C7V8 631 aa30.18■■■□□ 2.42
AC004890.2-201ENST00000426347 CHIC1Q5VXU3 224 aa29.58■■■□□ 2.33
AC004890.2-201ENST00000426347 MYO15BQ96JP2 1530 aa29.46■■■□□ 2.31
AC004890.2-201ENST00000426347 DCAF1Q9Y4B6 1507 aa29.36■■■□□ 2.29
AC004890.2-201ENST00000426347 PCGF6Q9BYE7 350 aa28.87■■■□□ 2.21
AC004890.2-201ENST00000426347 LOC105371045A0A1W2PR82 267 aa28.84■■■□□ 2.21
AC004890.2-201ENST00000426347 HRCP23327 699 aa28.8■■■□□ 2.2
AC004890.2-201ENST00000426347 SCRIBQ14160 1630 aa28.7■■■□□ 2.19
AC004890.2-201ENST00000426347 ABCC9O60706 1549 aa28.68■■■□□ 2.18
AC004890.2-201ENST00000426347 RSF1Q96T23 1441 aaPredicted RBP28.57■■■□□ 2.16
AC004890.2-201ENST00000426347 PPARGC1BQ86YN6 1023 aaKnown RBP28.35■■■□□ 2.13
AC004890.2-201ENST00000426347 TRIM41Q8WV44 630 aa28.32■■■□□ 2.12
AC004890.2-201ENST00000426347 RB1CC1Q8TDY2 1594 aa28.26■■■□□ 2.11
AC004890.2-201ENST00000426347 FAM9AQ8IZU1 332 aaPredicted RBP28.22■■■□□ 2.11
AC004890.2-201ENST00000426347 CECR2Q9BXF3 1484 aa28.17■■■□□ 2.1
AC004890.2-201ENST00000426347 TRIM26Q12899 539 aaPredicted RBP28.17■■■□□ 2.1
AC004890.2-201ENST00000426347 NACADO15069 1562 aa28.13■■■□□ 2.09
AC004890.2-201ENST00000426347 EHMT2Q96KQ7 1210 aa28.09■■■□□ 2.09
AC004890.2-201ENST00000426347 MROH2BQ7Z745 1585 aa28.03■■■□□ 2.08
AC004890.2-201ENST00000426347 WIZO95785 1651 aa27.88■■■□□ 2.05
AC004890.2-201ENST00000426347 BAZ1AQ9NRL2 1556 aaPredicted RBP27.59■■■□□ 2.01
AC004890.2-201ENST00000426347 ZEB1P37275 1124 aaPredicted RBP27.5■■□□□ 1.99
AC004890.2-201ENST00000426347 EIF4G1Q04637 1599 aaKnown RBP27.4■■□□□ 1.98
AC004890.2-201ENST00000426347 PELP1Q8IZL8 1130 aaKnown RBP27.38■■□□□ 1.97
AC004890.2-201ENST00000426347 CCDC88BA6NC98 1476 aa27.36■■□□□ 1.97
AC004890.2-201ENST00000426347 ABCC8Q09428 1581 aa27.35■■□□□ 1.97
AC004890.2-201ENST00000426347 SMARCA4P51532 1647 aa27.34■■□□□ 1.97
AC004890.2-201ENST00000426347 TOP2AP11388 1531 aaKnown RBP27.34■■□□□ 1.97
AC004890.2-201ENST00000426347 PABPN1Q86U42 306 aaKnown RBP eCLIP27.28■■□□□ 1.96
AC004890.2-201ENST00000426347 UNC13AQ9UPW8 1703 aa27.26■■□□□ 1.95
AC004890.2-201ENST00000426347 SMARCA2P51531 1590 aa27.23■■□□□ 1.95
AC004890.2-201ENST00000426347 TTBK1Q5TCY1 1321 aaPredicted RBP27.18■■□□□ 1.94
AC004890.2-201ENST00000426347 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.16■■□□□ 1.94
AC004890.2-201ENST00000426347 SOGA1O94964 1423 aa27.15■■□□□ 1.94
AC004890.2-201ENST00000426347 CCER1Q8TC90 406 aaPredicted RBP27.05■■□□□ 1.92
AC004890.2-201ENST00000426347 RUSC2Q8N2Y8 1516 aa27.02■■□□□ 1.92
AC004890.2-201ENST00000426347 CEP162Q5TB80 1403 aa27.01■■□□□ 1.91
AC004890.2-201ENST00000426347 CSRNP3Q8WYN3 585 aa27.01■■□□□ 1.91
AC004890.2-201ENST00000426347 UBTFP17480 764 aaKnown RBP27■■□□□ 1.91
AC004890.2-201ENST00000426347 BICRAQ9NZM4 1560 aa26.97■■□□□ 1.91
AC004890.2-201ENST00000426347 TNIKQ9UKE5 1360 aa26.92■■□□□ 1.9
AC004890.2-201ENST00000426347 WRNQ14191 1432 aaPredicted RBP eCLIP26.9■■□□□ 1.9
AC004890.2-201ENST00000426347 EEA1Q15075 1411 aa26.83■■□□□ 1.89
AC004890.2-201ENST00000426347 PEG3Q9GZU2 1588 aa26.73■■□□□ 1.87
AC004890.2-201ENST00000426347 GOLGA3Q08378 1498 aa26.73■■□□□ 1.87
AC004890.2-201ENST00000426347 SCAF1Q9H7N4 1312 aaKnown RBP26.71■■□□□ 1.87
AC004890.2-201ENST00000426347 ATAD2BQ9ULI0 1458 aa26.68■■□□□ 1.86
AC004890.2-201ENST00000426347 SYNJ1O43426 1573 aa26.67■■□□□ 1.86
AC004890.2-201ENST00000426347 BAZ1BQ9UIG0 1483 aaKnown RBP26.62■■□□□ 1.85
AC004890.2-201ENST00000426347 RANGAP1P46060 587 aaPredicted RBP26.59■■□□□ 1.85
AC004890.2-201ENST00000426347 CEP164Q9UPV0 1460 aa26.56■■□□□ 1.84
AC004890.2-201ENST00000426347 DIEXFQ68CQ4 756 aaKnown RBP26.54■■□□□ 1.84
AC004890.2-201ENST00000426347 CLIP1P30622 1438 aa26.49■■□□□ 1.83
AC004890.2-201ENST00000426347 HNRNPUL2Q1KMD3 747 aaKnown RBP26.49■■□□□ 1.83
AC004890.2-201ENST00000426347 RAPGEF2Q9Y4G8 1499 aa26.45■■□□□ 1.82
AC004890.2-201ENST00000426347 KIF21BO75037 1637 aa26.44■■□□□ 1.82
AC004890.2-201ENST00000426347 APLP2Q06481 763 aa26.37■■□□□ 1.81
AC004890.2-201ENST00000426347 NEUROD1Q13562 356 aa26.35■■□□□ 1.81
AC004890.2-201ENST00000426347 MYT1Q01538 1121 aa26.35■■□□□ 1.81
AC004890.2-201ENST00000426347 VPS8Q8N3P4 1428 aa26.34■■□□□ 1.81
AC004890.2-201ENST00000426347 ACIN1Q9UKV3 1341 aaKnown RBP26.32■■□□□ 1.8
AC004890.2-201ENST00000426347 ZNF316A6NFI3 1004 aaPredicted RBP26.27■■□□□ 1.8
AC004890.2-201ENST00000426347 TOP2BQ02880 1626 aa26.27■■□□□ 1.8
AC004890.2-201ENST00000426347 CENPBP07199 599 aaPredicted RBP26.14■■□□□ 1.77
AC004890.2-201ENST00000426347 BIVM-ERCC5R4GMW8 1640 aa26.11■■□□□ 1.77
AC004890.2-201ENST00000426347 NCAPD3P42695 1498 aa26.1■■□□□ 1.77
AC004890.2-201ENST00000426347 GTF3C3Q9Y5Q9 886 aa26.09■■□□□ 1.77
AC004890.2-201ENST00000426347 PRXQ9BXM0 1461 aa26.09■■□□□ 1.77
AC004890.2-201ENST00000426347 CUX1P39880 1505 aa26.06■■□□□ 1.76
AC004890.2-201ENST00000426347 KANK4Q5T7N3 995 aaPredicted RBP26.06■■□□□ 1.76
AC004890.2-201ENST00000426347 YTHDC1Q96MU7 727 aaKnown RBP26.03■■□□□ 1.76
AC004890.2-201ENST00000426347 HMGXB3Q12766 1538 aa26.02■■□□□ 1.76
AC004890.2-201ENST00000426347 ARAP1Q96P48 1450 aa26.01■■□□□ 1.75
AC004890.2-201ENST00000426347 ERICH3Q5RHP9 1530 aa26.01■■□□□ 1.75
AC004890.2-201ENST00000426347 KIF27Q86VH2 1401 aa25.99■■□□□ 1.75
AC004890.2-201ENST00000426347 MIER1Q8N108 512 aa25.98■■□□□ 1.75
AC004890.2-201ENST00000426347 CFTRP13569 1480 aa25.95■■□□□ 1.74
AC004890.2-201ENST00000426347 DHX57Q6P158 1386 aaKnown RBP25.83■■□□□ 1.73
AC004890.2-201ENST00000426347 ITGAEP38570 1179 aa25.81■■□□□ 1.72
AC004890.2-201ENST00000426347 ARHGAP35Q9NRY4 1499 aa25.8■■□□□ 1.72
AC004890.2-201ENST00000426347 CUX2O14529 1486 aa25.76■■□□□ 1.71
AC004890.2-201ENST00000426347 IGF1RP08069 1367 aa25.75■■□□□ 1.71
AC004890.2-201ENST00000426347 CLSPNQ9HAW4 1339 aa25.72■■□□□ 1.71
AC004890.2-201ENST00000426347 RRBP1Q9P2E9 1410 aaKnown RBP25.72■■□□□ 1.71
AC004890.2-201ENST00000426347 CCNB3Q8WWL7 1395 aa25.69■■□□□ 1.7
AC004890.2-201ENST00000426347 CADPSQ9ULU8 1353 aa25.69■■□□□ 1.7
AC004890.2-201ENST00000426347 CARMIL1Q5VZK9 1371 aa25.64■■□□□ 1.7
AC004890.2-201ENST00000426347 FGD5Q6ZNL6 1462 aa25.61■■□□□ 1.69
AC004890.2-201ENST00000426347 P3H3Q8IVL6 736 aa25.6■■□□□ 1.69
AC004890.2-201ENST00000426347 ATP1B4Q9UN42 357 aaPredicted RBP25.55■■□□□ 1.68
AC004890.2-201ENST00000426347 PRDM2Q13029 1718 aa25.54■■□□□ 1.68
AC004890.2-201ENST00000426347 RAB3GAP2Q9H2M9 1393 aa25.5■■□□□ 1.67
AC004890.2-201ENST00000426347 FAM50AQ14320 339 aaKnown RBP25.47■■□□□ 1.67
AC004890.2-201ENST00000426347 TIAM1Q13009 1591 aa25.47■■□□□ 1.67
AC004890.2-201ENST00000426347 PHLDB1Q86UU1 1377 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms