RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 AEBP2Q6ZN18 517 aaPredicted RBP27.36■■□□□ 1.97
HMGB1P32-201ENST00000425971 CHIC1Q5VXU3 224 aa26.97■■□□□ 1.91
HMGB1P32-201ENST00000425971 PHF23Q9BUL5 403 aaPredicted RBP23.81■■□□□ 1.4
HMGB1P32-201ENST00000425971 SENP3Q9H4L4 574 aaPredicted RBP23.28■■□□□ 1.32
HMGB1P32-201ENST00000425971 PLPPR3Q6T4P5 718 aa22.14■■□□□ 1.13
HMGB1P32-201ENST00000425971 FOXD1Q16676 465 aa21.62■■□□□ 1.05
HMGB1P32-201ENST00000425971 PPP6R1Q9UPN7 881 aa20.78■□□□□ 0.92
HMGB1P32-201ENST00000425971 ADRA2BP18089 450 aa20.77■□□□□ 0.92
HMGB1P32-201ENST00000425971 PIAS4Q8N2W9 510 aaPredicted RBP20.37■□□□□ 0.85
HMGB1P32-201ENST00000425971 MSH5O43196 834 aa20.05■□□□□ 0.8
HMGB1P32-201ENST00000425971 KCNA4P22459 653 aa19.87■□□□□ 0.77
HMGB1P32-201ENST00000425971 PPP4R3CPQ6ZMV5 832 aa19.59■□□□□ 0.73
HMGB1P32-201ENST00000425971 NCBP3Q53F19 620 aaKnown RBP19.23■□□□□ 0.67
HMGB1P32-201ENST00000425971 EHMT2Q96KQ7 1210 aa19.15■□□□□ 0.66
HMGB1P32-201ENST00000425971 SLC4A1APQ9BWU0 796 aaKnown RBP19.01■□□□□ 0.63
HMGB1P32-201ENST00000425971 NPM3O75607 178 aaKnown RBP19■□□□□ 0.63
HMGB1P32-201ENST00000425971 SCAF1Q9H7N4 1312 aaKnown RBP18.95■□□□□ 0.62
HMGB1P32-201ENST00000425971 CNKSR2Q8WXI2 1034 aa18.91■□□□□ 0.62
HMGB1P32-201ENST00000425971 MAPK8IP2Q13387 824 aaPredicted RBP18.75■□□□□ 0.59
HMGB1P32-201ENST00000425971 POTEDQ86YR6 584 aa18.7■□□□□ 0.58
HMGB1P32-201ENST00000425971 CSRNP3Q8WYN3 585 aa18.7■□□□□ 0.58
HMGB1P32-201ENST00000425971 DMRT2Q9Y5R5 561 aa18.53■□□□□ 0.56
HMGB1P32-201ENST00000425971 DNAJC5BQ9UF47 199 aa18.45■□□□□ 0.54
HMGB1P32-201ENST00000425971 RNF216Q9NWF9 866 aaPredicted RBP18.39■□□□□ 0.53
HMGB1P32-201ENST00000425971 ZBTB22O15209 634 aa18.33■□□□□ 0.52
HMGB1P32-201ENST00000425971 HOXD11P31277 338 aaPredicted RBP18.18■□□□□ 0.5
HMGB1P32-201ENST00000425971 FOXD4L1Q9NU39 408 aa18.11■□□□□ 0.49
HMGB1P32-201ENST00000425971 DCAF8L1A6NGE4 600 aa17.81■□□□□ 0.44
HMGB1P32-201ENST00000425971 SLC4A2P04920 1241 aa17.81■□□□□ 0.44
HMGB1P32-201ENST00000425971 MYCNP04198 464 aaPredicted RBP17.54■□□□□ 0.4
HMGB1P32-201ENST00000425971 ATXN8OSP0DMR3 200 aa17.42■□□□□ 0.38
HMGB1P32-201ENST00000425971 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.24■□□□□ 0.35
HMGB1P32-201ENST00000425971 RNF39Q9H2S5 420 aa17.15■□□□□ 0.34
HMGB1P32-201ENST00000425971 U3KPZ7 1027 aaPredicted RBP17.1■□□□□ 0.33
HMGB1P32-201ENST00000425971 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.05■□□□□ 0.32
HMGB1P32-201ENST00000425971 HNRNPUL2Q1KMD3 747 aaKnown RBP17.05■□□□□ 0.32
HMGB1P32-201ENST00000425971 SAMD1Q6SPF0 538 aaPredicted RBP17.04■□□□□ 0.32
HMGB1P32-201ENST00000425971 ATF5Q9Y2D1 282 aaPredicted RBP17.03■□□□□ 0.32
HMGB1P32-201ENST00000425971 C1QBPQ07021 282 aaKnown RBP16.92■□□□□ 0.3
HMGB1P32-201ENST00000425971 CACNB1Q02641 598 aaPredicted RBP16.91■□□□□ 0.3
HMGB1P32-201ENST00000425971 FKBP8Q14318 412 aa16.83■□□□□ 0.28
HMGB1P32-201ENST00000425971 APLP2Q06481 763 aa16.71■□□□□ 0.27
HMGB1P32-201ENST00000425971 ZNF219Q9P2Y4 722 aaPredicted RBP16.66■□□□□ 0.26
HMGB1P32-201ENST00000425971 SPINK5Q9NQ38 1064 aaPredicted RBP16.52■□□□□ 0.24
HMGB1P32-201ENST00000425971 CAPN15O75808 1086 aa16.49■□□□□ 0.23
HMGB1P32-201ENST00000425971 AMER1Q5JTC6 1135 aaPredicted RBP16.46■□□□□ 0.23
HMGB1P32-201ENST00000425971 RTN4Q9NQC3 1192 aaKnown RBP16.44■□□□□ 0.22
HMGB1P32-201ENST00000425971 TRHP20396 242 aaPredicted RBP16.35■□□□□ 0.21
HMGB1P32-201ENST00000425971 MKRN4PQ13434 485 aaPredicted RBP16.35■□□□□ 0.21
HMGB1P32-201ENST00000425971 DSG3P32926 999 aa16.23■□□□□ 0.19
HMGB1P32-201ENST00000425971 POLA2Q14181 598 aa16.23■□□□□ 0.19
HMGB1P32-201ENST00000425971 SPDYE4A6NLX3 237 aa16.22■□□□□ 0.19
HMGB1P32-201ENST00000425971 FBLN2P98095 1184 aa16.21■□□□□ 0.19
HMGB1P32-201ENST00000425971 ABCB7O75027 752 aa16.16■□□□□ 0.18
HMGB1P32-201ENST00000425971 PROM2Q8N271 834 aa16.15■□□□□ 0.18
HMGB1P32-201ENST00000425971 FBXO3Q9UK99 471 aa16.05■□□□□ 0.16
HMGB1P32-201ENST00000425971 ZBTB12Q9Y330 459 aaPredicted RBP16.04■□□□□ 0.16
HMGB1P32-201ENST00000425971 VASPP50552 380 aaPredicted RBP15.86■□□□□ 0.13
HMGB1P32-201ENST00000425971 SLC24A1O60721 1099 aa15.85■□□□□ 0.13
HMGB1P32-201ENST00000425971 OSCARQ8IYS5 282 aa15.7■□□□□ 0.1
HMGB1P32-201ENST00000425971 SPDYE2BA6NHP3 402 aa15.69■□□□□ 0.1
HMGB1P32-201ENST00000425971 SPDYE6P0CI01 402 aa15.69■□□□□ 0.1
HMGB1P32-201ENST00000425971 SPDYE2Q495Y8 402 aa15.69■□□□□ 0.1
HMGB1P32-201ENST00000425971 IFNLR1Q8IU57 520 aaPredicted RBP15.68■□□□□ 0.1
HMGB1P32-201ENST00000425971 ZNF692Q9BU19 519 aaPredicted RBP15.67■□□□□ 0.1
HMGB1P32-201ENST00000425971 SSUH2Q9Y2M2 353 aa15.67■□□□□ 0.1
HMGB1P32-201ENST00000425971 STAG3Q9UJ98 1225 aa15.51■□□□□ 0.07
HMGB1P32-201ENST00000425971 PABPN1Q86U42 306 aaKnown RBP eCLIP15.5■□□□□ 0.07
HMGB1P32-201ENST00000425971 RBM42Q9BTD8 480 aaKnown RBP15.49■□□□□ 0.07
HMGB1P32-201ENST00000425971 PKD2Q13563 968 aa15.41■□□□□ 0.06
HMGB1P32-201ENST00000425971 SPOCK2Q92563 424 aa15.37■□□□□ 0.05
HMGB1P32-201ENST00000425971 KLHL34Q8N239 644 aa15.35■□□□□ 0.05
HMGB1P32-201ENST00000425971 PLCD3Q8N3E9 789 aa15.32■□□□□ 0.04
HMGB1P32-201ENST00000425971 MIER1Q8N108 512 aa15.26■□□□□ 0.03
HMGB1P32-201ENST00000425971 AKT1S1Q96B36 256 aa15.23■□□□□ 0.03
HMGB1P32-201ENST00000425971 PLCB2Q00722 1185 aa15.21■□□□□ 0.03
HMGB1P32-201ENST00000425971 DCAF8L2P0C7V8 631 aa15.19■□□□□ 0.02
HMGB1P32-201ENST00000425971 ECM2O94769 699 aaPredicted RBP15.15■□□□□ 0.02
HMGB1P32-201ENST00000425971 ZBTB47Q9UFB7 747 aaPredicted RBP15.13■□□□□ 0.01
HMGB1P32-201ENST00000425971 PLEKHG5O94827 1062 aa15.12■□□□□ 0.01
HMGB1P32-201ENST00000425971 REM2Q8IYK8 340 aaPredicted RBP15.09■□□□□ 0.01
HMGB1P32-201ENST00000425971 SPDYE1Q8NFV5 336 aaPredicted RBP15.05■□□□□ -0
HMGB1P32-201ENST00000425971 RGL2O15211 777 aa15.02■□□□□ -0
HMGB1P32-201ENST00000425971 CIZ1Q9ULV3 898 aaPredicted RBP14.98□□□□□ -0.01
HMGB1P32-201ENST00000425971 NPM1P06748 294 aaKnown RBP eCLIP14.96□□□□□ -0.01
HMGB1P32-201ENST00000425971 CHRDL2Q6WN34 429 aa14.95□□□□□ -0.02
HMGB1P32-201ENST00000425971 PITPNM1O00562 1244 aa14.94□□□□□ -0.02
HMGB1P32-201ENST00000425971 BBXQ8WY36 941 aaPredicted RBP14.94□□□□□ -0.02
HMGB1P32-201ENST00000425971 HAP1P54257 671 aaPredicted RBP14.93□□□□□ -0.02
HMGB1P32-201ENST00000425971 TRIM41Q8WV44 630 aa14.93□□□□□ -0.02
HMGB1P32-201ENST00000425971 NUBP1P53384 320 aa14.91□□□□□ -0.02
HMGB1P32-201ENST00000425971 CREBZFQ9NS37 354 aa14.9□□□□□ -0.02
HMGB1P32-201ENST00000425971 CLEC11AQ9Y240 323 aa14.9□□□□□ -0.02
HMGB1P32-201ENST00000425971 PRR29P0C7W0 189 aa14.87□□□□□ -0.03
HMGB1P32-201ENST00000425971 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.87□□□□□ -0.03
HMGB1P32-201ENST00000425971 GSE1Q14687 1217 aa14.85□□□□□ -0.03
HMGB1P32-201ENST00000425971 MNX1P50219 401 aaPredicted RBP14.84□□□□□ -0.03
HMGB1P32-201ENST00000425971 PAXIP1Q6ZW49 1069 aaPredicted RBP14.78□□□□□ -0.04
HMGB1P32-201ENST00000425971 RNF25Q96BH1 459 aaPredicted RBP14.78□□□□□ -0.04
HMGB1P32-201ENST00000425971 POTEHQ6S545 545 aa14.76□□□□□ -0.05
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