RNA–Protein interactions for RNA: ENST00000425322.1

AC006041.1-201, humanhuman

TSL 3 BASIC

Gene AC006041.1, Length 328 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006041.1-201ENST00000425322 AEBP2Q6ZN18 517 aaPredicted RBP35.39■■■■□ 3.26
AC006041.1-201ENST00000425322 CHIC1Q5VXU3 224 aa33.25■■■□□ 2.91
AC006041.1-201ENST00000425322 SENP3Q9H4L4 574 aaPredicted RBP30.24■■■□□ 2.43
AC006041.1-201ENST00000425322 PHF23Q9BUL5 403 aaPredicted RBP29.76■■■□□ 2.35
AC006041.1-201ENST00000425322 FOXD1Q16676 465 aa28.22■■■□□ 2.11
AC006041.1-201ENST00000425322 MSH5O43196 834 aa26.57■■□□□ 1.84
AC006041.1-201ENST00000425322 POTEDQ86YR6 584 aa26.57■■□□□ 1.84
AC006041.1-201ENST00000425322 PLPPR3Q6T4P5 718 aa26.37■■□□□ 1.81
AC006041.1-201ENST00000425322 PIAS4Q8N2W9 510 aaPredicted RBP26.24■■□□□ 1.79
AC006041.1-201ENST00000425322 PPP6R1Q9UPN7 881 aa26.08■■□□□ 1.77
AC006041.1-201ENST00000425322 ADRA2BP18089 450 aa25.95■■□□□ 1.74
AC006041.1-201ENST00000425322 MAPK8IP2Q13387 824 aaPredicted RBP23.94■■□□□ 1.42
AC006041.1-201ENST00000425322 DMRT2Q9Y5R5 561 aa23.94■■□□□ 1.42
AC006041.1-201ENST00000425322 SCAF1Q9H7N4 1312 aaKnown RBP23.76■■□□□ 1.39
AC006041.1-201ENST00000425322 PPP4R3CPQ6ZMV5 832 aa23.05■■□□□ 1.28
AC006041.1-201ENST00000425322 CACNB1Q02641 598 aaPredicted RBP22.96■■□□□ 1.27
AC006041.1-201ENST00000425322 HOXD11P31277 338 aaPredicted RBP22.93■■□□□ 1.26
AC006041.1-201ENST00000425322 DCAF8L1A6NGE4 600 aa22.83■■□□□ 1.25
AC006041.1-201ENST00000425322 CNKSR2Q8WXI2 1034 aa22.73■■□□□ 1.23
AC006041.1-201ENST00000425322 RNF39Q9H2S5 420 aa22.66■■□□□ 1.22
AC006041.1-201ENST00000425322 RNF216Q9NWF9 866 aaPredicted RBP22.64■■□□□ 1.21
AC006041.1-201ENST00000425322 C1QBPQ07021 282 aaKnown RBP22.29■■□□□ 1.16
AC006041.1-201ENST00000425322 DNAJC5BQ9UF47 199 aa22.28■■□□□ 1.16
AC006041.1-201ENST00000425322 NCBP3Q53F19 620 aaKnown RBP22.04■■□□□ 1.12
AC006041.1-201ENST00000425322 NPM3O75607 178 aaKnown RBP21.75■■□□□ 1.07
AC006041.1-201ENST00000425322 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.75■■□□□ 1.07
AC006041.1-201ENST00000425322 U3KPZ7 1027 aaPredicted RBP21.31■■□□□ 1
AC006041.1-201ENST00000425322 SPINK5Q9NQ38 1064 aaPredicted RBP21.08■□□□□ 0.97
AC006041.1-201ENST00000425322 DSG3P32926 999 aa21.07■□□□□ 0.96
AC006041.1-201ENST00000425322 CAPN15O75808 1086 aa21.03■□□□□ 0.96
AC006041.1-201ENST00000425322 KCNA4P22459 653 aa20.97■□□□□ 0.95
AC006041.1-201ENST00000425322 SLC4A2P04920 1241 aa20.88■□□□□ 0.93
AC006041.1-201ENST00000425322 POTEHQ6S545 545 aa20.73■□□□□ 0.91
AC006041.1-201ENST00000425322 APLP2Q06481 763 aa20.66■□□□□ 0.9
AC006041.1-201ENST00000425322 ZNF219Q9P2Y4 722 aaPredicted RBP20.61■□□□□ 0.89
AC006041.1-201ENST00000425322 TRHP20396 242 aaPredicted RBP20.58■□□□□ 0.89
AC006041.1-201ENST00000425322 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.57■□□□□ 0.88
AC006041.1-201ENST00000425322 HNRNPUL2Q1KMD3 747 aaKnown RBP20.57■□□□□ 0.88
AC006041.1-201ENST00000425322 ABCB7O75027 752 aa20.5■□□□□ 0.87
AC006041.1-201ENST00000425322 SAMD1Q6SPF0 538 aaPredicted RBP20.43■□□□□ 0.86
AC006041.1-201ENST00000425322 MYCNP04198 464 aaPredicted RBP20.13■□□□□ 0.81
AC006041.1-201ENST00000425322 RBM42Q9BTD8 480 aaKnown RBP20.1■□□□□ 0.81
AC006041.1-201ENST00000425322 POLA2Q14181 598 aa19.98■□□□□ 0.79
AC006041.1-201ENST00000425322 CHRDL2Q6WN34 429 aa19.8■□□□□ 0.76
AC006041.1-201ENST00000425322 FOXD4L1Q9NU39 408 aa19.71■□□□□ 0.75
AC006041.1-201ENST00000425322 SLC4A1APQ9BWU0 796 aaKnown RBP19.7■□□□□ 0.74
AC006041.1-201ENST00000425322 ATF5Q9Y2D1 282 aaPredicted RBP19.68■□□□□ 0.74
AC006041.1-201ENST00000425322 ZBTB12Q9Y330 459 aaPredicted RBP19.6■□□□□ 0.73
AC006041.1-201ENST00000425322 AKT1S1Q96B36 256 aa19.57■□□□□ 0.72
AC006041.1-201ENST00000425322 OSCARQ8IYS5 282 aa19.38■□□□□ 0.69
AC006041.1-201ENST00000425322 REM2Q8IYK8 340 aaPredicted RBP19.37■□□□□ 0.69
AC006041.1-201ENST00000425322 ZBTB22O15209 634 aa19.31■□□□□ 0.68
AC006041.1-201ENST00000425322 SP7Q8TDD2 431 aaPredicted RBP19.27■□□□□ 0.68
AC006041.1-201ENST00000425322 PIP4P2Q8N4L2 257 aa19.26■□□□□ 0.67
AC006041.1-201ENST00000425322 PITPNM1O00562 1244 aa19.18■□□□□ 0.66
AC006041.1-201ENST00000425322 ATXN8OSP0DMR3 200 aa19.18■□□□□ 0.66
AC006041.1-201ENST00000425322 FXR2P51116 673 aaKnown RBP eCLIP19.12■□□□□ 0.65
AC006041.1-201ENST00000425322 SPDYE2BA6NHP3 402 aa18.96■□□□□ 0.63
AC006041.1-201ENST00000425322 SPDYE6P0CI01 402 aa18.96■□□□□ 0.63
AC006041.1-201ENST00000425322 SPDYE2Q495Y8 402 aa18.96■□□□□ 0.63
AC006041.1-201ENST00000425322 HAX1O00165 279 aa18.94■□□□□ 0.62
AC006041.1-201ENST00000425322 FBLN2P98095 1184 aa18.91■□□□□ 0.62
AC006041.1-201ENST00000425322 MKRN4PQ13434 485 aaPredicted RBP18.78■□□□□ 0.6
AC006041.1-201ENST00000425322 EVX2Q03828 476 aa18.73■□□□□ 0.59
AC006041.1-201ENST00000425322 SSUH2Q9Y2M2 353 aa18.7■□□□□ 0.58
AC006041.1-201ENST00000425322 SPDYE1Q8NFV5 336 aaPredicted RBP18.69■□□□□ 0.58
AC006041.1-201ENST00000425322 PRKAR2AP13861 404 aaKnown RBP18.64■□□□□ 0.57
AC006041.1-201ENST00000425322 ZNF692Q9BU19 519 aaPredicted RBP18.61■□□□□ 0.57
AC006041.1-201ENST00000425322 CLEC11AQ9Y240 323 aa18.61■□□□□ 0.57
AC006041.1-201ENST00000425322 C19orf67A6NJJ6 358 aa18.51■□□□□ 0.55
AC006041.1-201ENST00000425322 CHADLQ6NUI6 762 aa18.33■□□□□ 0.52
AC006041.1-201ENST00000425322 PABPN1Q86U42 306 aaKnown RBP eCLIP18.33■□□□□ 0.52
AC006041.1-201ENST00000425322 GABBR2O75899 941 aa18.3■□□□□ 0.52
AC006041.1-201ENST00000425322 PRR29P0C7W0 189 aa18.29■□□□□ 0.52
AC006041.1-201ENST00000425322 FARP1Q9Y4F1 1045 aaPredicted RBP18.06■□□□□ 0.48
AC006041.1-201ENST00000425322 CSRNP3Q8WYN3 585 aa18.05■□□□□ 0.48
AC006041.1-201ENST00000425322 LHX8Q68G74 356 aa18.04■□□□□ 0.48
AC006041.1-201ENST00000425322 CD44P16070 742 aaKnown RBP18.03■□□□□ 0.48
AC006041.1-201ENST00000425322 CLCN6P51797 869 aa17.94■□□□□ 0.46
AC006041.1-201ENST00000425322 POTEIP0CG38 1075 aa17.93■□□□□ 0.46
AC006041.1-201ENST00000425322 EHMT2Q96KQ7 1210 aa17.87■□□□□ 0.45
AC006041.1-201ENST00000425322 CREBZFQ9NS37 354 aa17.8■□□□□ 0.44
AC006041.1-201ENST00000425322 ZNF579Q8NAF0 562 aaKnown RBP17.79■□□□□ 0.44
AC006041.1-201ENST00000425322 STAG3Q9UJ98 1225 aa17.78■□□□□ 0.44
AC006041.1-201ENST00000425322 ZRANB1Q9UGI0 708 aa17.7■□□□□ 0.42
AC006041.1-201ENST00000425322 DCBLD2Q96PD2 775 aa17.67■□□□□ 0.42
AC006041.1-201ENST00000425322 SPDYE4A6NLX3 237 aa17.65■□□□□ 0.42
AC006041.1-201ENST00000425322 GALR2O43603 387 aaPredicted RBP17.55■□□□□ 0.4
AC006041.1-201ENST00000425322 MNX1P50219 401 aaPredicted RBP17.49■□□□□ 0.39
AC006041.1-201ENST00000425322 PAK3O75914 559 aaPredicted RBP17.47■□□□□ 0.39
AC006041.1-201ENST00000425322 NPM1P06748 294 aaKnown RBP eCLIP17.43■□□□□ 0.38
AC006041.1-201ENST00000425322 PHF12Q96QT6 1004 aa17.43■□□□□ 0.38
AC006041.1-201ENST00000425322 OTUD5Q96G74 571 aa17.34■□□□□ 0.37
AC006041.1-201ENST00000425322 POTEB2H3BUK9 544 aa17.32■□□□□ 0.36
AC006041.1-201ENST00000425322 PROM2Q8N271 834 aa17.28■□□□□ 0.36
AC006041.1-201ENST00000425322 PELP1Q8IZL8 1130 aaKnown RBP17.26■□□□□ 0.35
AC006041.1-201ENST00000425322 ASTLQ6HA08 431 aaPredicted RBP17.22■□□□□ 0.35
AC006041.1-201ENST00000425322 MS4A3Q96HJ5 214 aa17.21■□□□□ 0.35
AC006041.1-201ENST00000425322 ATMINO43313 823 aaPredicted RBP17.15■□□□□ 0.34
AC006041.1-201ENST00000425322 METRNQ9UJH8 293 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms