RNA–Protein interactions for RNA: ENST00000425167.6

TRPV1-204, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPV1, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-204ENST00000425167 NISCHQ9Y2I1 1504 aa26.18■■□□□ 1.78
TRPV1-204ENST00000425167 SHROOM4Q9ULL8 1493 aa22.42■■□□□ 1.18
TRPV1-204ENST00000425167 CCDC180Q9P1Z9 1646 aa22.23■■□□□ 1.15
TRPV1-204ENST00000425167 ZCCHC6Q5VYS8 1495 aaKnown RBP22.18■■□□□ 1.14
TRPV1-204ENST00000425167 SUPT5HO00267 1087 aaKnown RBP22.02■■□□□ 1.12
TRPV1-204ENST00000425167 DCAF8L2P0C7V8 631 aa21.7■■□□□ 1.06
TRPV1-204ENST00000425167 DCAF1Q9Y4B6 1507 aa21.47■■□□□ 1.03
TRPV1-204ENST00000425167 CHIC1Q5VXU3 224 aa21.42■■□□□ 1.02
TRPV1-204ENST00000425167 MYO15BQ96JP2 1530 aa21.39■■□□□ 1.01
TRPV1-204ENST00000425167 ABCC9O60706 1549 aa21.01■□□□□ 0.95
TRPV1-204ENST00000425167 HRCP23327 699 aa20.93■□□□□ 0.94
TRPV1-204ENST00000425167 SCRIBQ14160 1630 aa20.88■□□□□ 0.93
TRPV1-204ENST00000425167 PCGF6Q9BYE7 350 aa20.88■□□□□ 0.93
TRPV1-204ENST00000425167 LOC105371045A0A1W2PR82 267 aa20.79■□□□□ 0.92
TRPV1-204ENST00000425167 RSF1Q96T23 1441 aaPredicted RBP20.75■□□□□ 0.91
TRPV1-204ENST00000425167 NACADO15069 1562 aa20.66■□□□□ 0.9
TRPV1-204ENST00000425167 RB1CC1Q8TDY2 1594 aa20.58■□□□□ 0.89
TRPV1-204ENST00000425167 TRIM41Q8WV44 630 aa20.49■□□□□ 0.87
TRPV1-204ENST00000425167 PPARGC1BQ86YN6 1023 aaKnown RBP20.48■□□□□ 0.87
TRPV1-204ENST00000425167 TRIM26Q12899 539 aaPredicted RBP20.45■□□□□ 0.86
TRPV1-204ENST00000425167 CECR2Q9BXF3 1484 aa20.42■□□□□ 0.86
TRPV1-204ENST00000425167 MROH2BQ7Z745 1585 aa20.36■□□□□ 0.85
TRPV1-204ENST00000425167 FAM9AQ8IZU1 332 aaPredicted RBP20.34■□□□□ 0.85
TRPV1-204ENST00000425167 WIZO95785 1651 aa20.27■□□□□ 0.84
TRPV1-204ENST00000425167 EHMT2Q96KQ7 1210 aa20.18■□□□□ 0.82
TRPV1-204ENST00000425167 UNC13AQ9UPW8 1703 aa20.18■□□□□ 0.82
TRPV1-204ENST00000425167 BAZ1AQ9NRL2 1556 aaPredicted RBP20.16■□□□□ 0.82
TRPV1-204ENST00000425167 ZEB1P37275 1124 aaPredicted RBP20.05■□□□□ 0.8
TRPV1-204ENST00000425167 EIF4G1Q04637 1599 aaKnown RBP20.03■□□□□ 0.8
TRPV1-204ENST00000425167 TOP2AP11388 1531 aaKnown RBP19.96■□□□□ 0.79
TRPV1-204ENST00000425167 SMARCA4P51532 1647 aa19.94■□□□□ 0.78
TRPV1-204ENST00000425167 BICRAQ9NZM4 1560 aa19.93■□□□□ 0.78
TRPV1-204ENST00000425167 ABCC8Q09428 1581 aa19.86■□□□□ 0.77
TRPV1-204ENST00000425167 CCDC88BA6NC98 1476 aa19.86■□□□□ 0.77
TRPV1-204ENST00000425167 SMARCA2P51531 1590 aa19.84■□□□□ 0.77
TRPV1-204ENST00000425167 PABPN1Q86U42 306 aaKnown RBP eCLIP19.73■□□□□ 0.753e-7■■■■□ 25.8
TRPV1-204ENST00000425167 SOGA1O94964 1423 aa19.67■□□□□ 0.74
TRPV1-204ENST00000425167 CEP162Q5TB80 1403 aa19.65■□□□□ 0.74
TRPV1-204ENST00000425167 WRNQ14191 1432 aaPredicted RBP eCLIP19.63■□□□□ 0.73
TRPV1-204ENST00000425167 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.63■□□□□ 0.73
TRPV1-204ENST00000425167 EEA1Q15075 1411 aa19.6■□□□□ 0.73
TRPV1-204ENST00000425167 CCER1Q8TC90 406 aaPredicted RBP19.59■□□□□ 0.73
TRPV1-204ENST00000425167 TNIKQ9UKE5 1360 aa19.59■□□□□ 0.73
TRPV1-204ENST00000425167 RUSC2Q8N2Y8 1516 aa19.57■□□□□ 0.72
TRPV1-204ENST00000425167 TTBK1Q5TCY1 1321 aaPredicted RBP19.56■□□□□ 0.72
TRPV1-204ENST00000425167 CSRNP3Q8WYN3 585 aa19.56■□□□□ 0.72
TRPV1-204ENST00000425167 PEG3Q9GZU2 1588 aa19.53■□□□□ 0.72
TRPV1-204ENST00000425167 UBTFP17480 764 aaKnown RBP19.52■□□□□ 0.72
TRPV1-204ENST00000425167 GOLGA3Q08378 1498 aa19.49■□□□□ 0.71
TRPV1-204ENST00000425167 SYNJ1O43426 1573 aa19.42■□□□□ 0.7
TRPV1-204ENST00000425167 ATAD2BQ9ULI0 1458 aa19.39■□□□□ 0.69
TRPV1-204ENST00000425167 BAZ1BQ9UIG0 1483 aaKnown RBP19.36■□□□□ 0.69
TRPV1-204ENST00000425167 CEP164Q9UPV0 1460 aa19.36■□□□□ 0.69
TRPV1-204ENST00000425167 KIF21BO75037 1637 aa19.34■□□□□ 0.69
TRPV1-204ENST00000425167 SCAF1Q9H7N4 1312 aaKnown RBP19.34■□□□□ 0.69
TRPV1-204ENST00000425167 CLIP1P30622 1438 aa19.26■□□□□ 0.67
TRPV1-204ENST00000425167 DIEXFQ68CQ4 756 aaKnown RBP19.25■□□□□ 0.67
TRPV1-204ENST00000425167 RAPGEF2Q9Y4G8 1499 aa19.2■□□□□ 0.66
TRPV1-204ENST00000425167 VPS8Q8N3P4 1428 aa19.19■□□□□ 0.66
TRPV1-204ENST00000425167 TOP2BQ02880 1626 aa19.17■□□□□ 0.66
TRPV1-204ENST00000425167 ACIN1Q9UKV3 1341 aaKnown RBP19.14■□□□□ 0.65
TRPV1-204ENST00000425167 HNRNPUL2Q1KMD3 747 aaKnown RBP19.14■□□□□ 0.65
TRPV1-204ENST00000425167 RANGAP1P46060 587 aaPredicted RBP19.12■□□□□ 0.65
TRPV1-204ENST00000425167 APLP2Q06481 763 aa19.12■□□□□ 0.65
TRPV1-204ENST00000425167 NEUROD1Q13562 356 aa19.1■□□□□ 0.65
TRPV1-204ENST00000425167 BIVM-ERCC5R4GMW8 1640 aa19.09■□□□□ 0.65
TRPV1-204ENST00000425167 ZNF316A6NFI3 1004 aaPredicted RBP19.08■□□□□ 0.64
TRPV1-204ENST00000425167 CC2D2AQ9P2K1 1620 aa19.06■□□□□ 0.64
TRPV1-204ENST00000425167 NCAPD3P42695 1498 aa19.05■□□□□ 0.64
TRPV1-204ENST00000425167 HMGXB3Q12766 1538 aa19.05■□□□□ 0.64
TRPV1-204ENST00000425167 CENPBP07199 599 aaPredicted RBP19.04■□□□□ 0.64
TRPV1-204ENST00000425167 PELP1Q8IZL8 1130 aaKnown RBP19.04■□□□□ 0.64
TRPV1-204ENST00000425167 ERICH3Q5RHP9 1530 aa19.01■□□□□ 0.63
TRPV1-204ENST00000425167 PRXQ9BXM0 1461 aa18.99■□□□□ 0.63
TRPV1-204ENST00000425167 CUX1P39880 1505 aa18.96■□□□□ 0.63
TRPV1-204ENST00000425167 ARAP1Q96P48 1450 aa18.94■□□□□ 0.62
TRPV1-204ENST00000425167 GTF3C3Q9Y5Q9 886 aa18.92■□□□□ 0.62
TRPV1-204ENST00000425167 KIF27Q86VH2 1401 aa18.9■□□□□ 0.62
TRPV1-204ENST00000425167 CFTRP13569 1480 aa18.87■□□□□ 0.61
TRPV1-204ENST00000425167 KANK4Q5T7N3 995 aaPredicted RBP18.83■□□□□ 0.6
TRPV1-204ENST00000425167 YTHDC1Q96MU7 727 aaKnown RBP18.82■□□□□ 0.6
TRPV1-204ENST00000425167 MIER1Q8N108 512 aa18.81■□□□□ 0.6
TRPV1-204ENST00000425167 DHX57Q6P158 1386 aaKnown RBP18.78■□□□□ 0.6
TRPV1-204ENST00000425167 CLSPNQ9HAW4 1339 aa18.77■□□□□ 0.59
TRPV1-204ENST00000425167 ARHGAP35Q9NRY4 1499 aa18.75■□□□□ 0.59
TRPV1-204ENST00000425167 PRDM2Q13029 1718 aa18.75■□□□□ 0.59
TRPV1-204ENST00000425167 RRBP1Q9P2E9 1410 aaKnown RBP18.74■□□□□ 0.59
TRPV1-204ENST00000425167 CUX2O14529 1486 aa18.7■□□□□ 0.58
TRPV1-204ENST00000425167 CCNB3Q8WWL7 1395 aa18.67■□□□□ 0.58
TRPV1-204ENST00000425167 IGF1RP08069 1367 aa18.66■□□□□ 0.58
TRPV1-204ENST00000425167 CADPSQ9ULU8 1353 aa18.64■□□□□ 0.57
TRPV1-204ENST00000425167 DNAJC5BQ9UF47 199 aa18.63■□□□□ 0.57
TRPV1-204ENST00000425167 ITGAEP38570 1179 aa18.61■□□□□ 0.57
TRPV1-204ENST00000425167 FGD5Q6ZNL6 1462 aa18.61■□□□□ 0.57
TRPV1-204ENST00000425167 CARMIL1Q5VZK9 1371 aa18.6■□□□□ 0.57
TRPV1-204ENST00000425167 TIAM1Q13009 1591 aa18.58■□□□□ 0.56
TRPV1-204ENST00000425167 MAP3K1Q13233 1512 aa18.54■□□□□ 0.56
TRPV1-204ENST00000425167 RAB3GAP2Q9H2M9 1393 aa18.51■□□□□ 0.55
TRPV1-204ENST00000425167 LRRC9Q6ZRR7 1453 aa18.5■□□□□ 0.55
TRPV1-204ENST00000425167 FHAD1B1AJZ9 1412 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms