RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 AEBP2Q6ZN18 517 aaPredicted RBP18.48■□□□□ 0.55
VPS8-205ENST00000424721 CHIC1Q5VXU3 224 aa18.03■□□□□ 0.48
VPS8-205ENST00000424721 PHF23Q9BUL5 403 aaPredicted RBP15.88■□□□□ 0.13
VPS8-205ENST00000424721 SENP3Q9H4L4 574 aaPredicted RBP15.65■□□□□ 0.1
VPS8-205ENST00000424721 PLPPR3Q6T4P5 718 aa14.65□□□□□ -0.06
VPS8-205ENST00000424721 FOXD1Q16676 465 aa14.54□□□□□ -0.08
VPS8-205ENST00000424721 ADRA2BP18089 450 aa14.02□□□□□ -0.17
VPS8-205ENST00000424721 PPP6R1Q9UPN7 881 aa14.02□□□□□ -0.17
VPS8-205ENST00000424721 PIAS4Q8N2W9 510 aaPredicted RBP13.73□□□□□ -0.21
VPS8-205ENST00000424721 MSH5O43196 834 aa13.39□□□□□ -0.27
VPS8-205ENST00000424721 NISCHQ9Y2I1 1504 aa12.98□□□□□ -0.33
VPS8-205ENST00000424721 PPP4R3CPQ6ZMV5 832 aa12.92□□□□□ -0.34
VPS8-205ENST00000424721 SCAF1Q9H7N4 1312 aaKnown RBP12.78□□□□□ -0.36
VPS8-205ENST00000424721 MAPK8IP2Q13387 824 aaPredicted RBP12.72□□□□□ -0.37
VPS8-205ENST00000424721 KCNA4P22459 653 aa12.65□□□□□ -0.38
VPS8-205ENST00000424721 NCBP3Q53F19 620 aaKnown RBP12.56□□□□□ -0.4
VPS8-205ENST00000424721 POTEDQ86YR6 584 aa12.54□□□□□ -0.4
VPS8-205ENST00000424721 CNKSR2Q8WXI2 1034 aa12.54□□□□□ -0.4
VPS8-205ENST00000424721 DMRT2Q9Y5R5 561 aa12.5□□□□□ -0.41
VPS8-205ENST00000424721 NPM3O75607 178 aaKnown RBP12.41□□□□□ -0.42
VPS8-205ENST00000424721 RNF216Q9NWF9 866 aaPredicted RBP12.29□□□□□ -0.44
VPS8-205ENST00000424721 HOXD11P31277 338 aaPredicted RBP12.23□□□□□ -0.45
VPS8-205ENST00000424721 SLC4A1APQ9BWU0 796 aaKnown RBP12.03□□□□□ -0.48
VPS8-205ENST00000424721 DCAF8L1A6NGE4 600 aa12.01□□□□□ -0.49
VPS8-205ENST00000424721 DNAJC5BQ9UF47 199 aa11.97□□□□□ -0.49
VPS8-205ENST00000424721 EHMT2Q96KQ7 1210 aa11.8□□□□□ -0.52
VPS8-205ENST00000424721 ABCC9O60706 1549 aa11.7□□□□□ -0.54
VPS8-205ENST00000424721 SLC4A2P04920 1241 aa11.7□□□□□ -0.54
VPS8-205ENST00000424721 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.69□□□□□ -0.54
VPS8-205ENST00000424721 ZBTB22O15209 634 aa11.63□□□□□ -0.55
VPS8-205ENST00000424721 FOXD4L1Q9NU39 408 aa11.61□□□□□ -0.55
VPS8-205ENST00000424721 CCDC180Q9P1Z9 1646 aa11.6□□□□□ -0.55
VPS8-205ENST00000424721 CSRNP3Q8WYN3 585 aa11.57□□□□□ -0.56
VPS8-205ENST00000424721 U3KPZ7 1027 aaPredicted RBP11.49□□□□□ -0.57
VPS8-205ENST00000424721 RNF39Q9H2S5 420 aa11.48□□□□□ -0.57
VPS8-205ENST00000424721 MYCNP04198 464 aaPredicted RBP11.44□□□□□ -0.58
VPS8-205ENST00000424721 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.33□□□□□ -0.6
VPS8-205ENST00000424721 C1QBPQ07021 282 aaKnown RBP11.33□□□□□ -0.6
VPS8-205ENST00000424721 HNRNPUL2Q1KMD3 747 aaKnown RBP11.33□□□□□ -0.6
VPS8-205ENST00000424721 SAMD1Q6SPF0 538 aaPredicted RBP11.29□□□□□ -0.6
VPS8-205ENST00000424721 CACNB1Q02641 598 aaPredicted RBP11.2□□□□□ -0.62
VPS8-205ENST00000424721 APLP2Q06481 763 aa11.2□□□□□ -0.62
VPS8-205ENST00000424721 DCAF8L2P0C7V8 631 aa11.19□□□□□ -0.62
VPS8-205ENST00000424721 SPINK5Q9NQ38 1064 aaPredicted RBP11.19□□□□□ -0.62
VPS8-205ENST00000424721 ATXN8OSP0DMR3 200 aa11.18□□□□□ -0.62
VPS8-205ENST00000424721 ATF5Q9Y2D1 282 aaPredicted RBP11.17□□□□□ -0.62
VPS8-205ENST00000424721 RB1CC1Q8TDY2 1594 aa11.16□□□□□ -0.62
VPS8-205ENST00000424721 CAPN15O75808 1086 aa11.14□□□□□ -0.63
VPS8-205ENST00000424721 TRHP20396 242 aaPredicted RBP11.1□□□□□ -0.63
VPS8-205ENST00000424721 NACADO15069 1562 aa11.07□□□□□ -0.64
VPS8-205ENST00000424721 ZNF219Q9P2Y4 722 aaPredicted RBP11.06□□□□□ -0.64
VPS8-205ENST00000424721 PABPN1Q86U42 306 aaKnown RBP eCLIP10.97□□□□□ -0.65
VPS8-205ENST00000424721 ABCB7O75027 752 aa10.94□□□□□ -0.66
VPS8-205ENST00000424721 DSG3P32926 999 aa10.94□□□□□ -0.66
VPS8-205ENST00000424721 MYO15BQ96JP2 1530 aa10.91□□□□□ -0.66
VPS8-205ENST00000424721 POLA2Q14181 598 aa10.91□□□□□ -0.66
VPS8-205ENST00000424721 DCAF1Q9Y4B6 1507 aa10.74□□□□□ -0.69
VPS8-205ENST00000424721 BICRAQ9NZM4 1560 aa10.71□□□□□ -0.69
VPS8-205ENST00000424721 SHROOM4Q9ULL8 1493 aa10.7□□□□□ -0.7
VPS8-205ENST00000424721 ZBTB12Q9Y330 459 aaPredicted RBP10.7□□□□□ -0.7
VPS8-205ENST00000424721 UNC13AQ9UPW8 1703 aa10.7□□□□□ -0.7
VPS8-205ENST00000424721 ZCCHC6Q5VYS8 1495 aaKnown RBP10.69□□□□□ -0.7
VPS8-205ENST00000424721 FBLN2P98095 1184 aa10.68□□□□□ -0.7
VPS8-205ENST00000424721 MKRN4PQ13434 485 aaPredicted RBP10.67□□□□□ -0.7
VPS8-205ENST00000424721 CECR2Q9BXF3 1484 aa10.59□□□□□ -0.71
VPS8-205ENST00000424721 SCRIBQ14160 1630 aa10.55□□□□□ -0.72
VPS8-205ENST00000424721 OSCARQ8IYS5 282 aa10.55□□□□□ -0.72
VPS8-205ENST00000424721 CC2D2AQ9P2K1 1620 aa10.53□□□□□ -0.72
VPS8-205ENST00000424721 EIF4G1Q04637 1599 aaKnown RBP10.51□□□□□ -0.73
VPS8-205ENST00000424721 FKBP8Q14318 412 aa10.47□□□□□ -0.73
VPS8-205ENST00000424721 SPDYE4A6NLX3 237 aa10.44□□□□□ -0.74
VPS8-205ENST00000424721 SPDYE2BA6NHP3 402 aa10.41□□□□□ -0.74
VPS8-205ENST00000424721 SPDYE6P0CI01 402 aa10.41□□□□□ -0.74
VPS8-205ENST00000424721 SPDYE2Q495Y8 402 aa10.41□□□□□ -0.74
VPS8-205ENST00000424721 RBM42Q9BTD8 480 aaKnown RBP10.4□□□□□ -0.74
VPS8-205ENST00000424721 ZNF692Q9BU19 519 aaPredicted RBP10.4□□□□□ -0.74
VPS8-205ENST00000424721 SSUH2Q9Y2M2 353 aa10.34□□□□□ -0.75
VPS8-205ENST00000424721 DNAJC5Q9H3Z4 198 aa10.3□□□□□ -0.76
VPS8-205ENST00000424721 AKT1S1Q96B36 256 aa10.28□□□□□ -0.76
VPS8-205ENST00000424721 NCAPD3P42695 1498 aa10.25□□□□□ -0.77
VPS8-205ENST00000424721 PROM2Q8N271 834 aa10.23□□□□□ -0.77
VPS8-205ENST00000424721 REM2Q8IYK8 340 aaPredicted RBP10.2□□□□□ -0.78
VPS8-205ENST00000424721 ERCC6Q03468 1493 aa10.19□□□□□ -0.78
VPS8-205ENST00000424721 SMARCA2P51531 1590 aa10.17□□□□□ -0.78
VPS8-205ENST00000424721 CUX2O14529 1486 aa10.17□□□□□ -0.78
VPS8-205ENST00000424721 ATAD2BQ9ULI0 1458 aa10.17□□□□□ -0.78
VPS8-205ENST00000424721 FBXO3Q9UK99 471 aa10.13□□□□□ -0.79
VPS8-205ENST00000424721 SPDYE1Q8NFV5 336 aaPredicted RBP10.11□□□□□ -0.79
VPS8-205ENST00000424721 CLEC11AQ9Y240 323 aa10.11□□□□□ -0.79
VPS8-205ENST00000424721 BAZ1AQ9NRL2 1556 aaPredicted RBP10.09□□□□□ -0.79
VPS8-205ENST00000424721 HMGXB3Q12766 1538 aa10.09□□□□□ -0.79
VPS8-205ENST00000424721 PITPNM1O00562 1244 aa10.09□□□□□ -0.79
VPS8-205ENST00000424721 BAZ1BQ9UIG0 1483 aaKnown RBP10.09□□□□□ -0.79
VPS8-205ENST00000424721 SMARCA4P51532 1647 aa10.07□□□□□ -0.8
VPS8-205ENST00000424721 STAG3Q9UJ98 1225 aa10.06□□□□□ -0.8
VPS8-205ENST00000424721 PDS5BQ9NTI5 1447 aa10.04□□□□□ -0.8
VPS8-205ENST00000424721 PRR29P0C7W0 189 aa10□□□□□ -0.81
VPS8-205ENST00000424721 PEG3Q9GZU2 1588 aa10□□□□□ -0.81
VPS8-205ENST00000424721 NESP48681 1621 aa10□□□□□ -0.81
VPS8-205ENST00000424721 CHRDL2Q6WN34 429 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms