RNA–Protein interactions for RNA: ENST00000423239.6

RC3H2-205, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 5 BASIC

Gene RC3H2, Length 3,623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-205ENST00000423239 NISCHQ9Y2I1 1504 aa28.57■■■□□ 2.16
RC3H2-205ENST00000423239 DCAF8L2P0C7V8 631 aa24.74■■□□□ 1.55
RC3H2-205ENST00000423239 SHROOM4Q9ULL8 1493 aa24.71■■□□□ 1.55
RC3H2-205ENST00000423239 CCDC180Q9P1Z9 1646 aa24.2■■□□□ 1.46
RC3H2-205ENST00000423239 SUPT5HO00267 1087 aaKnown RBP24.19■■□□□ 1.46
RC3H2-205ENST00000423239 ZCCHC6Q5VYS8 1495 aaKnown RBP24.01■■□□□ 1.43
RC3H2-205ENST00000423239 ABCC9O60706 1549 aa23.31■■□□□ 1.32
RC3H2-205ENST00000423239 DCAF1Q9Y4B6 1507 aa23.22■■□□□ 1.31
RC3H2-205ENST00000423239 CHIC1Q5VXU3 224 aa23.01■■□□□ 1.27
RC3H2-205ENST00000423239 SCRIBQ14160 1630 aa23■■□□□ 1.27
RC3H2-205ENST00000423239 NACADO15069 1562 aa22.66■■□□□ 1.22
RC3H2-205ENST00000423239 MYO15BQ96JP2 1530 aa22.64■■□□□ 1.21
RC3H2-205ENST00000423239 RSF1Q96T23 1441 aaPredicted RBP22.57■■□□□ 1.2
RC3H2-205ENST00000423239 LOC105371045A0A1W2PR82 267 aa22.49■■□□□ 1.19
RC3H2-205ENST00000423239 TRIM41Q8WV44 630 aa22.47■■□□□ 1.19
RC3H2-205ENST00000423239 FAM9AQ8IZU1 332 aaPredicted RBP22.46■■□□□ 1.19
RC3H2-205ENST00000423239 EHMT2Q96KQ7 1210 aa22.45■■□□□ 1.19
RC3H2-205ENST00000423239 RB1CC1Q8TDY2 1594 aa22.45■■□□□ 1.18
RC3H2-205ENST00000423239 CECR2Q9BXF3 1484 aa22.44■■□□□ 1.18
RC3H2-205ENST00000423239 PABPN1Q86U42 306 aaKnown RBP eCLIP22.43■■□□□ 1.18
RC3H2-205ENST00000423239 MROH2BQ7Z745 1585 aa22.25■■□□□ 1.15
RC3H2-205ENST00000423239 PCGF6Q9BYE7 350 aa22.22■■□□□ 1.15
RC3H2-205ENST00000423239 WIZO95785 1651 aa22.07■■□□□ 1.12
RC3H2-205ENST00000423239 BAZ1AQ9NRL2 1556 aaPredicted RBP22■■□□□ 1.11
RC3H2-205ENST00000423239 SMARCA4P51532 1647 aa21.78■■□□□ 1.08
RC3H2-205ENST00000423239 UNC13AQ9UPW8 1703 aa21.76■■□□□ 1.07
RC3H2-205ENST00000423239 PPARGC1BQ86YN6 1023 aaKnown RBP21.73■■□□□ 1.07
RC3H2-205ENST00000423239 CCDC88BA6NC98 1476 aa21.72■■□□□ 1.07
RC3H2-205ENST00000423239 HRCP23327 699 aa21.71■■□□□ 1.07
RC3H2-205ENST00000423239 TRIM26Q12899 539 aaPredicted RBP21.7■■□□□ 1.07
RC3H2-205ENST00000423239 TOP2AP11388 1531 aaKnown RBP21.68■■□□□ 1.06
RC3H2-205ENST00000423239 BICRAQ9NZM4 1560 aa21.65■■□□□ 1.06
RC3H2-205ENST00000423239 TTBK1Q5TCY1 1321 aaPredicted RBP21.6■■□□□ 1.05
RC3H2-205ENST00000423239 UBTFP17480 764 aaKnown RBP21.59■■□□□ 1.05
RC3H2-205ENST00000423239 ABCC8Q09428 1581 aa21.58■■□□□ 1.05
RC3H2-205ENST00000423239 SMARCA2P51531 1590 aa21.53■■□□□ 1.04
RC3H2-205ENST00000423239 BAZ1BQ9UIG0 1483 aaKnown RBP21.48■■□□□ 1.03
RC3H2-205ENST00000423239 RANGAP1P46060 587 aaPredicted RBP21.45■■□□□ 1.02
RC3H2-205ENST00000423239 ATAD2BQ9ULI0 1458 aa21.43■■□□□ 1.02
RC3H2-205ENST00000423239 CSRNP3Q8WYN3 585 aa21.43■■□□□ 1.02
RC3H2-205ENST00000423239 SOGA1O94964 1423 aa21.39■■□□□ 1.01
RC3H2-205ENST00000423239 WRNQ14191 1432 aaPredicted RBP eCLIP21.35■■□□□ 1.01
RC3H2-205ENST00000423239 EIF4G1Q04637 1599 aaKnown RBP21.26■□□□□ 0.99
RC3H2-205ENST00000423239 RUSC2Q8N2Y8 1516 aa21.25■□□□□ 0.99
RC3H2-205ENST00000423239 PEG3Q9GZU2 1588 aa21.18■□□□□ 0.98
RC3H2-205ENST00000423239 CEP162Q5TB80 1403 aa21.14■□□□□ 0.97
RC3H2-205ENST00000423239 EEA1Q15075 1411 aa21.13■□□□□ 0.97
RC3H2-205ENST00000423239 APLP2Q06481 763 aa21.12■□□□□ 0.97
RC3H2-205ENST00000423239 ZEB1P37275 1124 aaPredicted RBP21.1■□□□□ 0.97
RC3H2-205ENST00000423239 CCER1Q8TC90 406 aaPredicted RBP21.08■□□□□ 0.97
RC3H2-205ENST00000423239 TNIKQ9UKE5 1360 aa21.08■□□□□ 0.96
RC3H2-205ENST00000423239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.07■□□□□ 0.96
RC3H2-205ENST00000423239 GOLGA3Q08378 1498 aa21.04■□□□□ 0.96
RC3H2-205ENST00000423239 SYNJ1O43426 1573 aa21.02■□□□□ 0.96
RC3H2-205ENST00000423239 NCAPD3P42695 1498 aa21.02■□□□□ 0.96
RC3H2-205ENST00000423239 CEP164Q9UPV0 1460 aa20.94■□□□□ 0.94
RC3H2-205ENST00000423239 CLIP1P30622 1438 aa20.9■□□□□ 0.94
RC3H2-205ENST00000423239 HNRNPUL2Q1KMD3 747 aaKnown RBP20.89■□□□□ 0.93
RC3H2-205ENST00000423239 HMGXB3Q12766 1538 aa20.87■□□□□ 0.93
RC3H2-205ENST00000423239 RAPGEF2Q9Y4G8 1499 aa20.84■□□□□ 0.93
RC3H2-205ENST00000423239 CADPSQ9ULU8 1353 aa20.78■□□□□ 0.92
RC3H2-205ENST00000423239 KIF27Q86VH2 1401 aa20.76■□□□□ 0.91
RC3H2-205ENST00000423239 CFTRP13569 1480 aa20.76■□□□□ 0.91
RC3H2-205ENST00000423239 ATP1B4Q9UN42 357 aaPredicted RBP20.75■□□□□ 0.91
RC3H2-205ENST00000423239 TOP2BQ02880 1626 aa20.74■□□□□ 0.91
RC3H2-205ENST00000423239 CC2D2AQ9P2K1 1620 aa20.71■□□□□ 0.91
RC3H2-205ENST00000423239 CUX1P39880 1505 aa20.71■□□□□ 0.91
RC3H2-205ENST00000423239 CUX2O14529 1486 aa20.66■□□□□ 0.9
RC3H2-205ENST00000423239 KIF21BO75037 1637 aa20.66■□□□□ 0.9
RC3H2-205ENST00000423239 P3H3Q8IVL6 736 aa20.64■□□□□ 0.89
RC3H2-205ENST00000423239 VPS8Q8N3P4 1428 aa20.63■□□□□ 0.89
RC3H2-205ENST00000423239 ITGAEP38570 1179 aa20.6■□□□□ 0.89
RC3H2-205ENST00000423239 BIVM-ERCC5R4GMW8 1640 aa20.56■□□□□ 0.88
RC3H2-205ENST00000423239 FANCD2Q9BXW9 1451 aa20.55■□□□□ 0.88
RC3H2-205ENST00000423239 DNAJC5BQ9UF47 199 aa20.55■□□□□ 0.88
RC3H2-205ENST00000423239 NESP48681 1621 aa20.53■□□□□ 0.88
RC3H2-205ENST00000423239 PRXQ9BXM0 1461 aa20.53■□□□□ 0.88
RC3H2-205ENST00000423239 CARMIL1Q5VZK9 1371 aa20.52■□□□□ 0.88
RC3H2-205ENST00000423239 FGD5Q6ZNL6 1462 aa20.52■□□□□ 0.88
RC3H2-205ENST00000423239 IGF1RP08069 1367 aa20.5■□□□□ 0.87
RC3H2-205ENST00000423239 KANK4Q5T7N3 995 aaPredicted RBP20.5■□□□□ 0.87
RC3H2-205ENST00000423239 RAD54L2Q9Y4B4 1467 aa20.43■□□□□ 0.86
RC3H2-205ENST00000423239 ERICH3Q5RHP9 1530 aa20.43■□□□□ 0.86
RC3H2-205ENST00000423239 ARAP1Q96P48 1450 aa20.37■□□□□ 0.85
RC3H2-205ENST00000423239 TDRD9Q8NDG6 1382 aaKnown RBP20.36■□□□□ 0.85
RC3H2-205ENST00000423239 FAM50AQ14320 339 aaKnown RBP20.33■□□□□ 0.85
RC3H2-205ENST00000423239 DIEXFQ68CQ4 756 aaKnown RBP20.33■□□□□ 0.84
RC3H2-205ENST00000423239 PDS5BQ9NTI5 1447 aa20.3■□□□□ 0.84
RC3H2-205ENST00000423239 TOPBP1Q92547 1522 aa20.29■□□□□ 0.84
RC3H2-205ENST00000423239 ARHGAP35Q9NRY4 1499 aa20.29■□□□□ 0.84
RC3H2-205ENST00000423239 POLA1P09884 1462 aaPredicted RBP20.28■□□□□ 0.84
RC3H2-205ENST00000423239 DNMBPQ6XZF7 1577 aa20.22■□□□□ 0.83
RC3H2-205ENST00000423239 PRDM2Q13029 1718 aa20.22■□□□□ 0.83
RC3H2-205ENST00000423239 ZNF316A6NFI3 1004 aaPredicted RBP20.21■□□□□ 0.83
RC3H2-205ENST00000423239 FHOD3Q2V2M9 1422 aa20.18■□□□□ 0.82
RC3H2-205ENST00000423239 ARID3CA6NKF2 412 aa20.18■□□□□ 0.82
RC3H2-205ENST00000423239 CCNB3Q8WWL7 1395 aa20.16■□□□□ 0.82
RC3H2-205ENST00000423239 URB2Q14146 1524 aaKnown RBP20.15■□□□□ 0.82
RC3H2-205ENST00000423239 ABCA10Q8WWZ4 1543 aa20.14■□□□□ 0.81
RC3H2-205ENST00000423239 LAMC3Q9Y6N6 1575 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms