RNA–Protein interactions for RNA: ENST00000421501.1

PGBD4P6-201, Transcript of piggyBac transposable element derived 4 pseudogene 6, humanhuman

BASIC

Gene PGBD4P6, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4P6-201ENST00000421501 AEBP2Q6ZN18 517 aaPredicted RBP19.58■□□□□ 0.72
PGBD4P6-201ENST00000421501 CHIC1Q5VXU3 224 aa18.35■□□□□ 0.53
PGBD4P6-201ENST00000421501 SENP3Q9H4L4 574 aaPredicted RBP16.63■□□□□ 0.25
PGBD4P6-201ENST00000421501 PHF23Q9BUL5 403 aaPredicted RBP16.44■□□□□ 0.22
PGBD4P6-201ENST00000421501 FOXD1Q16676 465 aa15.59■□□□□ 0.09
PGBD4P6-201ENST00000421501 POTEDQ86YR6 584 aa14.62□□□□□ -0.07
PGBD4P6-201ENST00000421501 MSH5O43196 834 aa14.58□□□□□ -0.08
PGBD4P6-201ENST00000421501 PLPPR3Q6T4P5 718 aa14.54□□□□□ -0.08
PGBD4P6-201ENST00000421501 PIAS4Q8N2W9 510 aaPredicted RBP14.5□□□□□ -0.09
PGBD4P6-201ENST00000421501 PPP6R1Q9UPN7 881 aa14.48□□□□□ -0.09
PGBD4P6-201ENST00000421501 ADRA2BP18089 450 aa14.41□□□□□ -0.1
PGBD4P6-201ENST00000421501 MAPK8IP2Q13387 824 aaPredicted RBP13.31□□□□□ -0.28
PGBD4P6-201ENST00000421501 DMRT2Q9Y5R5 561 aa13.18□□□□□ -0.3
PGBD4P6-201ENST00000421501 SCAF1Q9H7N4 1312 aaKnown RBP13.06□□□□□ -0.32
PGBD4P6-201ENST00000421501 PPP4R3CPQ6ZMV5 832 aa12.76□□□□□ -0.37
PGBD4P6-201ENST00000421501 DCAF8L1A6NGE4 600 aa12.67□□□□□ -0.38
PGBD4P6-201ENST00000421501 CACNB1Q02641 598 aaPredicted RBP12.66□□□□□ -0.38
PGBD4P6-201ENST00000421501 HOXD11P31277 338 aaPredicted RBP12.62□□□□□ -0.39
PGBD4P6-201ENST00000421501 CNKSR2Q8WXI2 1034 aa12.53□□□□□ -0.4
PGBD4P6-201ENST00000421501 RNF39Q9H2S5 420 aa12.47□□□□□ -0.41
PGBD4P6-201ENST00000421501 RNF216Q9NWF9 866 aaPredicted RBP12.46□□□□□ -0.41
PGBD4P6-201ENST00000421501 C1QBPQ07021 282 aaKnown RBP12.24□□□□□ -0.45
PGBD4P6-201ENST00000421501 DNAJC5BQ9UF47 199 aa12.16□□□□□ -0.46
PGBD4P6-201ENST00000421501 NCBP3Q53F19 620 aaKnown RBP12.14□□□□□ -0.47
PGBD4P6-201ENST00000421501 NPM3O75607 178 aaKnown RBP12.05□□□□□ -0.48
PGBD4P6-201ENST00000421501 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.02□□□□□ -0.49
PGBD4P6-201ENST00000421501 U3KPZ7 1027 aaPredicted RBP11.78□□□□□ -0.52
PGBD4P6-201ENST00000421501 SPINK5Q9NQ38 1064 aaPredicted RBP11.7□□□□□ -0.54
PGBD4P6-201ENST00000421501 KCNA4P22459 653 aa11.68□□□□□ -0.54
PGBD4P6-201ENST00000421501 CAPN15O75808 1086 aa11.63□□□□□ -0.55
PGBD4P6-201ENST00000421501 DSG3P32926 999 aa11.63□□□□□ -0.55
PGBD4P6-201ENST00000421501 SLC4A2P04920 1241 aa11.58□□□□□ -0.56
PGBD4P6-201ENST00000421501 TRHP20396 242 aaPredicted RBP11.41□□□□□ -0.58
PGBD4P6-201ENST00000421501 POTEHQ6S545 545 aa11.4□□□□□ -0.58
PGBD4P6-201ENST00000421501 ABCB7O75027 752 aa11.39□□□□□ -0.59
PGBD4P6-201ENST00000421501 ZNF219Q9P2Y4 722 aaPredicted RBP11.32□□□□□ -0.6
PGBD4P6-201ENST00000421501 APLP2Q06481 763 aa11.3□□□□□ -0.6
PGBD4P6-201ENST00000421501 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.27□□□□□ -0.61
PGBD4P6-201ENST00000421501 HNRNPUL2Q1KMD3 747 aaKnown RBP11.27□□□□□ -0.61
PGBD4P6-201ENST00000421501 SAMD1Q6SPF0 538 aaPredicted RBP11.23□□□□□ -0.61
PGBD4P6-201ENST00000421501 MYCNP04198 464 aaPredicted RBP11.1□□□□□ -0.63
PGBD4P6-201ENST00000421501 POLA2Q14181 598 aa11.07□□□□□ -0.64
PGBD4P6-201ENST00000421501 RBM42Q9BTD8 480 aaKnown RBP11.01□□□□□ -0.65
PGBD4P6-201ENST00000421501 ATF5Q9Y2D1 282 aaPredicted RBP10.96□□□□□ -0.65
PGBD4P6-201ENST00000421501 SLC4A1APQ9BWU0 796 aaKnown RBP10.94□□□□□ -0.66
PGBD4P6-201ENST00000421501 CHRDL2Q6WN34 429 aa10.91□□□□□ -0.66
PGBD4P6-201ENST00000421501 FOXD4L1Q9NU39 408 aa10.9□□□□□ -0.66
PGBD4P6-201ENST00000421501 ZBTB22O15209 634 aa10.77□□□□□ -0.69
PGBD4P6-201ENST00000421501 AKT1S1Q96B36 256 aa10.76□□□□□ -0.69
PGBD4P6-201ENST00000421501 OSCARQ8IYS5 282 aa10.73□□□□□ -0.69
PGBD4P6-201ENST00000421501 ZBTB12Q9Y330 459 aaPredicted RBP10.73□□□□□ -0.69
PGBD4P6-201ENST00000421501 REM2Q8IYK8 340 aaPredicted RBP10.69□□□□□ -0.7
PGBD4P6-201ENST00000421501 PIP4P2Q8N4L2 257 aa10.63□□□□□ -0.71
PGBD4P6-201ENST00000421501 PITPNM1O00562 1244 aa10.59□□□□□ -0.71
PGBD4P6-201ENST00000421501 SP7Q8TDD2 431 aaPredicted RBP10.59□□□□□ -0.71
PGBD4P6-201ENST00000421501 ATXN8OSP0DMR3 200 aa10.54□□□□□ -0.72
PGBD4P6-201ENST00000421501 FXR2P51116 673 aaKnown RBP eCLIP10.52□□□□□ -0.73
PGBD4P6-201ENST00000421501 HAX1O00165 279 aa10.47□□□□□ -0.73
PGBD4P6-201ENST00000421501 SPDYE2BA6NHP3 402 aa10.43□□□□□ -0.74
PGBD4P6-201ENST00000421501 SPDYE6P0CI01 402 aa10.43□□□□□ -0.74
PGBD4P6-201ENST00000421501 MKRN4PQ13434 485 aaPredicted RBP10.43□□□□□ -0.74
PGBD4P6-201ENST00000421501 SPDYE2Q495Y8 402 aa10.43□□□□□ -0.74
PGBD4P6-201ENST00000421501 FBLN2P98095 1184 aa10.42□□□□□ -0.74
PGBD4P6-201ENST00000421501 EVX2Q03828 476 aa10.41□□□□□ -0.74
PGBD4P6-201ENST00000421501 CLEC11AQ9Y240 323 aa10.33□□□□□ -0.76
PGBD4P6-201ENST00000421501 PRKAR2AP13861 404 aaKnown RBP10.31□□□□□ -0.76
PGBD4P6-201ENST00000421501 SPDYE1Q8NFV5 336 aaPredicted RBP10.3□□□□□ -0.76
PGBD4P6-201ENST00000421501 ZNF692Q9BU19 519 aaPredicted RBP10.3□□□□□ -0.76
PGBD4P6-201ENST00000421501 SSUH2Q9Y2M2 353 aa10.3□□□□□ -0.76
PGBD4P6-201ENST00000421501 C19orf67A6NJJ6 358 aa10.19□□□□□ -0.78
PGBD4P6-201ENST00000421501 CHADLQ6NUI6 762 aa10.19□□□□□ -0.78
PGBD4P6-201ENST00000421501 PABPN1Q86U42 306 aaKnown RBP eCLIP10.16□□□□□ -0.78
PGBD4P6-201ENST00000421501 GABBR2O75899 941 aa10.1□□□□□ -0.79
PGBD4P6-201ENST00000421501 PRR29P0C7W0 189 aa10.1□□□□□ -0.79
PGBD4P6-201ENST00000421501 CSRNP3Q8WYN3 585 aa10.07□□□□□ -0.8
PGBD4P6-201ENST00000421501 FARP1Q9Y4F1 1045 aaPredicted RBP9.98□□□□□ -0.81
PGBD4P6-201ENST00000421501 CD44P16070 742 aaKnown RBP9.96□□□□□ -0.82
PGBD4P6-201ENST00000421501 LHX8Q68G74 356 aa9.94□□□□□ -0.82
PGBD4P6-201ENST00000421501 POTEIP0CG38 1075 aa9.93□□□□□ -0.82
PGBD4P6-201ENST00000421501 CREBZFQ9NS37 354 aa9.85□□□□□ -0.83
PGBD4P6-201ENST00000421501 EHMT2Q96KQ7 1210 aa9.84□□□□□ -0.83
PGBD4P6-201ENST00000421501 ZNF579Q8NAF0 562 aaKnown RBP9.79□□□□□ -0.84
PGBD4P6-201ENST00000421501 ZRANB1Q9UGI0 708 aa9.79□□□□□ -0.84
PGBD4P6-201ENST00000421501 SPDYE4A6NLX3 237 aa9.78□□□□□ -0.84
PGBD4P6-201ENST00000421501 CLCN6P51797 869 aa9.77□□□□□ -0.85
PGBD4P6-201ENST00000421501 STAG3Q9UJ98 1225 aa9.77□□□□□ -0.85
PGBD4P6-201ENST00000421501 DCBLD2Q96PD2 775 aa9.75□□□□□ -0.85
PGBD4P6-201ENST00000421501 GALR2O43603 387 aaPredicted RBP9.72□□□□□ -0.85
PGBD4P6-201ENST00000421501 PHF12Q96QT6 1004 aa9.68□□□□□ -0.86
PGBD4P6-201ENST00000421501 MNX1P50219 401 aaPredicted RBP9.67□□□□□ -0.86
PGBD4P6-201ENST00000421501 POTEB2H3BUK9 544 aa9.61□□□□□ -0.87
PGBD4P6-201ENST00000421501 PAK3O75914 559 aaPredicted RBP9.61□□□□□ -0.87
PGBD4P6-201ENST00000421501 NPM1P06748 294 aaKnown RBP eCLIP9.59□□□□□ -0.87
PGBD4P6-201ENST00000421501 PELP1Q8IZL8 1130 aaKnown RBP9.58□□□□□ -0.88
PGBD4P6-201ENST00000421501 OTUD5Q96G74 571 aa9.58□□□□□ -0.88
PGBD4P6-201ENST00000421501 PROM2Q8N271 834 aa9.53□□□□□ -0.88
PGBD4P6-201ENST00000421501 MS4A3Q96HJ5 214 aa9.53□□□□□ -0.88
PGBD4P6-201ENST00000421501 TSPYL2Q9H2G4 693 aaPredicted RBP9.49□□□□□ -0.89
PGBD4P6-201ENST00000421501 ASTLQ6HA08 431 aaPredicted RBP9.48□□□□□ -0.89
PGBD4P6-201ENST00000421501 ATMINO43313 823 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms