RNA–Protein interactions for RNA: ENST00000421014.2

CCDC18-204, Transcript of coiled-coil domain containing 18, humanhuman

TSL 5

Gene CCDC18, Length 606 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-204ENST00000421014 AEBP2Q6ZN18 517 aaPredicted RBP30.65■■■□□ 2.5
CCDC18-204ENST00000421014 CHIC1Q5VXU3 224 aa28.85■■■□□ 2.21
CCDC18-204ENST00000421014 SENP3Q9H4L4 574 aaPredicted RBP26.15■■□□□ 1.78
CCDC18-204ENST00000421014 PHF23Q9BUL5 403 aaPredicted RBP25.83■■□□□ 1.73
CCDC18-204ENST00000421014 FOXD1Q16676 465 aa24.45■■□□□ 1.5
CCDC18-204ENST00000421014 PLPPR3Q6T4P5 718 aa22.94■■□□□ 1.26
CCDC18-204ENST00000421014 MSH5O43196 834 aa22.93■■□□□ 1.26
CCDC18-204ENST00000421014 POTEDQ86YR6 584 aa22.84■■□□□ 1.25
CCDC18-204ENST00000421014 PIAS4Q8N2W9 510 aaPredicted RBP22.81■■□□□ 1.24
CCDC18-204ENST00000421014 PPP6R1Q9UPN7 881 aa22.69■■□□□ 1.22
CCDC18-204ENST00000421014 ADRA2BP18089 450 aa22.63■■□□□ 1.21
CCDC18-204ENST00000421014 MAPK8IP2Q13387 824 aaPredicted RBP20.87■□□□□ 0.93
CCDC18-204ENST00000421014 DMRT2Q9Y5R5 561 aa20.69■□□□□ 0.9
CCDC18-204ENST00000421014 SCAF1Q9H7N4 1312 aaKnown RBP20.65■□□□□ 0.9
CCDC18-204ENST00000421014 PPP4R3CPQ6ZMV5 832 aa20.12■□□□□ 0.81
CCDC18-204ENST00000421014 DCAF8L1A6NGE4 600 aa20■□□□□ 0.79
CCDC18-204ENST00000421014 CACNB1Q02641 598 aaPredicted RBP19.91■□□□□ 0.78
CCDC18-204ENST00000421014 HOXD11P31277 338 aaPredicted RBP19.83■□□□□ 0.77
CCDC18-204ENST00000421014 CNKSR2Q8WXI2 1034 aa19.76■□□□□ 0.75
CCDC18-204ENST00000421014 RNF216Q9NWF9 866 aaPredicted RBP19.62■□□□□ 0.73
CCDC18-204ENST00000421014 RNF39Q9H2S5 420 aa19.54■□□□□ 0.72
CCDC18-204ENST00000421014 NCBP3Q53F19 620 aaKnown RBP19.25■□□□□ 0.67
CCDC18-204ENST00000421014 C1QBPQ07021 282 aaKnown RBP19.24■□□□□ 0.67
CCDC18-204ENST00000421014 DNAJC5BQ9UF47 199 aa19.1■□□□□ 0.65
CCDC18-204ENST00000421014 NPM3O75607 178 aaKnown RBP18.98■□□□□ 0.63
CCDC18-204ENST00000421014 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.98■□□□□ 0.63
CCDC18-204ENST00000421014 U3KPZ7 1027 aaPredicted RBP18.51■□□□□ 0.55
CCDC18-204ENST00000421014 KCNA4P22459 653 aa18.43■□□□□ 0.54
CCDC18-204ENST00000421014 CAPN15O75808 1086 aa18.36■□□□□ 0.53
CCDC18-204ENST00000421014 SPINK5Q9NQ38 1064 aaPredicted RBP18.36■□□□□ 0.53
CCDC18-204ENST00000421014 DSG3P32926 999 aa18.24■□□□□ 0.51
CCDC18-204ENST00000421014 SLC4A2P04920 1241 aa18.18■□□□□ 0.5
CCDC18-204ENST00000421014 TRHP20396 242 aaPredicted RBP18.02■□□□□ 0.48
CCDC18-204ENST00000421014 APLP2Q06481 763 aa17.94■□□□□ 0.46
CCDC18-204ENST00000421014 ABCB7O75027 752 aa17.93■□□□□ 0.46
CCDC18-204ENST00000421014 ZNF219Q9P2Y4 722 aaPredicted RBP17.89■□□□□ 0.45
CCDC18-204ENST00000421014 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.86■□□□□ 0.45
CCDC18-204ENST00000421014 HNRNPUL2Q1KMD3 747 aaKnown RBP17.86■□□□□ 0.45
CCDC18-204ENST00000421014 POTEHQ6S545 545 aa17.85■□□□□ 0.45
CCDC18-204ENST00000421014 SAMD1Q6SPF0 538 aaPredicted RBP17.76■□□□□ 0.43
CCDC18-204ENST00000421014 MYCNP04198 464 aaPredicted RBP17.54■□□□□ 0.4
CCDC18-204ENST00000421014 POLA2Q14181 598 aa17.45■□□□□ 0.38
CCDC18-204ENST00000421014 RBM42Q9BTD8 480 aaKnown RBP17.39■□□□□ 0.37
CCDC18-204ENST00000421014 SLC4A1APQ9BWU0 796 aaKnown RBP17.35■□□□□ 0.37
CCDC18-204ENST00000421014 FOXD4L1Q9NU39 408 aa17.24■□□□□ 0.35
CCDC18-204ENST00000421014 ATF5Q9Y2D1 282 aaPredicted RBP17.21■□□□□ 0.35
CCDC18-204ENST00000421014 CHRDL2Q6WN34 429 aa17.14■□□□□ 0.33
CCDC18-204ENST00000421014 ZBTB12Q9Y330 459 aaPredicted RBP17■□□□□ 0.31
CCDC18-204ENST00000421014 AKT1S1Q96B36 256 aa16.95■□□□□ 0.3
CCDC18-204ENST00000421014 ZBTB22O15209 634 aa16.92■□□□□ 0.3
CCDC18-204ENST00000421014 OSCARQ8IYS5 282 aa16.89■□□□□ 0.29
CCDC18-204ENST00000421014 REM2Q8IYK8 340 aaPredicted RBP16.82■□□□□ 0.28
CCDC18-204ENST00000421014 PIP4P2Q8N4L2 257 aa16.69■□□□□ 0.26
CCDC18-204ENST00000421014 ATXN8OSP0DMR3 200 aa16.67■□□□□ 0.26
CCDC18-204ENST00000421014 PITPNM1O00562 1244 aa16.65■□□□□ 0.26
CCDC18-204ENST00000421014 SP7Q8TDD2 431 aaPredicted RBP16.61■□□□□ 0.25
CCDC18-204ENST00000421014 FBLN2P98095 1184 aa16.53■□□□□ 0.24
CCDC18-204ENST00000421014 FXR2P51116 673 aaKnown RBP eCLIP16.51■□□□□ 0.23
CCDC18-204ENST00000421014 HAX1O00165 279 aa16.5■□□□□ 0.23
CCDC18-204ENST00000421014 SPDYE2BA6NHP3 402 aa16.47■□□□□ 0.23
CCDC18-204ENST00000421014 SPDYE6P0CI01 402 aa16.47■□□□□ 0.23
CCDC18-204ENST00000421014 SPDYE2Q495Y8 402 aa16.47■□□□□ 0.23
CCDC18-204ENST00000421014 MKRN4PQ13434 485 aaPredicted RBP16.37■□□□□ 0.21
CCDC18-204ENST00000421014 CLEC11AQ9Y240 323 aa16.34■□□□□ 0.21
CCDC18-204ENST00000421014 ZNF692Q9BU19 519 aaPredicted RBP16.3■□□□□ 0.2
CCDC18-204ENST00000421014 EVX2Q03828 476 aa16.26■□□□□ 0.19
CCDC18-204ENST00000421014 SPDYE1Q8NFV5 336 aaPredicted RBP16.26■□□□□ 0.19
CCDC18-204ENST00000421014 PRKAR2AP13861 404 aaKnown RBP16.24■□□□□ 0.19
CCDC18-204ENST00000421014 SSUH2Q9Y2M2 353 aa16.2■□□□□ 0.18
CCDC18-204ENST00000421014 CHADLQ6NUI6 762 aa16.05■□□□□ 0.16
CCDC18-204ENST00000421014 PABPN1Q86U42 306 aaKnown RBP eCLIP16.04■□□□□ 0.16
CCDC18-204ENST00000421014 C19orf67A6NJJ6 358 aa16■□□□□ 0.15
CCDC18-204ENST00000421014 PRR29P0C7W0 189 aa15.99■□□□□ 0.15
CCDC18-204ENST00000421014 CSRNP3Q8WYN3 585 aa15.93■□□□□ 0.14
CCDC18-204ENST00000421014 GABBR2O75899 941 aa15.87■□□□□ 0.13
CCDC18-204ENST00000421014 FARP1Q9Y4F1 1045 aaPredicted RBP15.72■□□□□ 0.11
CCDC18-204ENST00000421014 CD44P16070 742 aaKnown RBP15.7■□□□□ 0.1
CCDC18-204ENST00000421014 EHMT2Q96KQ7 1210 aa15.66■□□□□ 0.1
CCDC18-204ENST00000421014 LHX8Q68G74 356 aa15.6■□□□□ 0.09
CCDC18-204ENST00000421014 POTEIP0CG38 1075 aa15.52■□□□□ 0.08
CCDC18-204ENST00000421014 STAG3Q9UJ98 1225 aa15.51■□□□□ 0.07
CCDC18-204ENST00000421014 SPDYE4A6NLX3 237 aa15.5■□□□□ 0.07
CCDC18-204ENST00000421014 CREBZFQ9NS37 354 aa15.5■□□□□ 0.07
CCDC18-204ENST00000421014 ZRANB1Q9UGI0 708 aa15.46■□□□□ 0.07
CCDC18-204ENST00000421014 CLCN6P51797 869 aa15.43■□□□□ 0.06
CCDC18-204ENST00000421014 DCBLD2Q96PD2 775 aa15.41■□□□□ 0.06
CCDC18-204ENST00000421014 ZNF579Q8NAF0 562 aaKnown RBP15.39■□□□□ 0.05
CCDC18-204ENST00000421014 GALR2O43603 387 aaPredicted RBP15.28■□□□□ 0.04
CCDC18-204ENST00000421014 PAK3O75914 559 aaPredicted RBP15.26■□□□□ 0.03
CCDC18-204ENST00000421014 PHF12Q96QT6 1004 aa15.22■□□□□ 0.03
CCDC18-204ENST00000421014 NPM1P06748 294 aaKnown RBP eCLIP15.21■□□□□ 0.03
CCDC18-204ENST00000421014 MNX1P50219 401 aaPredicted RBP15.18■□□□□ 0.02
CCDC18-204ENST00000421014 POTEB2H3BUK9 544 aa15.02■□□□□ -0
CCDC18-204ENST00000421014 PELP1Q8IZL8 1130 aaKnown RBP15.01□□□□□ -0.01
CCDC18-204ENST00000421014 TSPYL2Q9H2G4 693 aaPredicted RBP15□□□□□ -0.01
CCDC18-204ENST00000421014 PROM2Q8N271 834 aa14.99□□□□□ -0.01
CCDC18-204ENST00000421014 OTUD5Q96G74 571 aa14.99□□□□□ -0.01
CCDC18-204ENST00000421014 MS4A3Q96HJ5 214 aa14.99□□□□□ -0.01
CCDC18-204ENST00000421014 ASTLQ6HA08 431 aaPredicted RBP14.89□□□□□ -0.03
CCDC18-204ENST00000421014 ATMINO43313 823 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms