RNA–Protein interactions for RNA: ENST00000420978.6

TSLP-203, Transcript of thymic stromal lymphopoietin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSLP, Length 2,621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSLP-203ENST00000420978 NISCHQ9Y2I1 1504 aa38.12■■■■□ 3.69
TSLP-203ENST00000420978 SHROOM4Q9ULL8 1493 aa32.73■■■□□ 2.83
TSLP-203ENST00000420978 DCAF8L2P0C7V8 631 aa32.31■■■□□ 2.76
TSLP-203ENST00000420978 CCDC180Q9P1Z9 1646 aa32.29■■■□□ 2.76
TSLP-203ENST00000420978 ZCCHC6Q5VYS8 1495 aaKnown RBP32.13■■■□□ 2.73
TSLP-203ENST00000420978 SUPT5HO00267 1087 aaKnown RBP31.89■■■□□ 2.7
TSLP-203ENST00000420978 DCAF1Q9Y4B6 1507 aa31.02■■■□□ 2.56
TSLP-203ENST00000420978 ABCC9O60706 1549 aa30.83■■■□□ 2.53
TSLP-203ENST00000420978 SCRIBQ14160 1630 aa30.63■■■□□ 2.49
TSLP-203ENST00000420978 CHIC1Q5VXU3 224 aa30.61■■■□□ 2.49
TSLP-203ENST00000420978 MYO15BQ96JP2 1530 aa30.41■■■□□ 2.46
TSLP-203ENST00000420978 RSF1Q96T23 1441 aaPredicted RBP30.14■■■□□ 2.42
TSLP-203ENST00000420978 NACADO15069 1562 aa30.08■■■□□ 2.41
TSLP-203ENST00000420978 CECR2Q9BXF3 1484 aa30■■■□□ 2.39
TSLP-203ENST00000420978 LOC105371045A0A1W2PR82 267 aa29.92■■■□□ 2.38
TSLP-203ENST00000420978 RB1CC1Q8TDY2 1594 aa29.76■■■□□ 2.35
TSLP-203ENST00000420978 MROH2BQ7Z745 1585 aa29.75■■■□□ 2.35
TSLP-203ENST00000420978 PABPN1Q86U42 306 aaKnown RBP eCLIP29.59■■■□□ 2.33
TSLP-203ENST00000420978 FAM9AQ8IZU1 332 aaPredicted RBP29.57■■■□□ 2.32
TSLP-203ENST00000420978 TRIM41Q8WV44 630 aa29.56■■■□□ 2.32
TSLP-203ENST00000420978 WIZO95785 1651 aa29.54■■■□□ 2.32
TSLP-203ENST00000420978 EHMT2Q96KQ7 1210 aa29.54■■■□□ 2.32
TSLP-203ENST00000420978 PCGF6Q9BYE7 350 aa29.41■■■□□ 2.3
TSLP-203ENST00000420978 UNC13AQ9UPW8 1703 aa29.28■■■□□ 2.28
TSLP-203ENST00000420978 BAZ1AQ9NRL2 1556 aaPredicted RBP29.24■■■□□ 2.27
TSLP-203ENST00000420978 HRCP23327 699 aa29.12■■■□□ 2.25
TSLP-203ENST00000420978 SMARCA4P51532 1647 aa29.07■■■□□ 2.24
TSLP-203ENST00000420978 BICRAQ9NZM4 1560 aa29.05■■■□□ 2.24
TSLP-203ENST00000420978 CCDC88BA6NC98 1476 aa28.97■■■□□ 2.23
TSLP-203ENST00000420978 TOP2AP11388 1531 aaKnown RBP28.91■■■□□ 2.22
TSLP-203ENST00000420978 ABCC8Q09428 1581 aa28.86■■■□□ 2.21
TSLP-203ENST00000420978 SMARCA2P51531 1590 aa28.81■■■□□ 2.2
TSLP-203ENST00000420978 EIF4G1Q04637 1599 aaKnown RBP28.77■■■□□ 2.2
TSLP-203ENST00000420978 PPARGC1BQ86YN6 1023 aaKnown RBP28.75■■■□□ 2.19
TSLP-203ENST00000420978 TRIM26Q12899 539 aaPredicted RBP28.69■■■□□ 2.18
TSLP-203ENST00000420978 SOGA1O94964 1423 aa28.55■■■□□ 2.16
TSLP-203ENST00000420978 ATAD2BQ9ULI0 1458 aa28.53■■■□□ 2.16
TSLP-203ENST00000420978 RUSC2Q8N2Y8 1516 aa28.47■■■□□ 2.15
TSLP-203ENST00000420978 BAZ1BQ9UIG0 1483 aaKnown RBP28.42■■■□□ 2.14
TSLP-203ENST00000420978 TTBK1Q5TCY1 1321 aaPredicted RBP28.42■■■□□ 2.14
TSLP-203ENST00000420978 PEG3Q9GZU2 1588 aa28.4■■■□□ 2.14
TSLP-203ENST00000420978 WRNQ14191 1432 aaPredicted RBP eCLIP28.3■■■□□ 2.12
TSLP-203ENST00000420978 CSRNP3Q8WYN3 585 aa28.28■■■□□ 2.12
TSLP-203ENST00000420978 UBTFP17480 764 aaKnown RBP28.27■■■□□ 2.12
TSLP-203ENST00000420978 SYNJ1O43426 1573 aa28.16■■■□□ 2.1
TSLP-203ENST00000420978 RANGAP1P46060 587 aaPredicted RBP28.12■■■□□ 2.09
TSLP-203ENST00000420978 CEP162Q5TB80 1403 aa28.1■■■□□ 2.09
TSLP-203ENST00000420978 ZEB1P37275 1124 aaPredicted RBP28.05■■■□□ 2.08
TSLP-203ENST00000420978 TNIKQ9UKE5 1360 aa27.98■■■□□ 2.07
TSLP-203ENST00000420978 NCAPD3P42695 1498 aa27.96■■■□□ 2.07
TSLP-203ENST00000420978 EEA1Q15075 1411 aa27.93■■■□□ 2.06
TSLP-203ENST00000420978 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.91■■■□□ 2.06
TSLP-203ENST00000420978 GOLGA3Q08378 1498 aa27.87■■■□□ 2.05
TSLP-203ENST00000420978 RAPGEF2Q9Y4G8 1499 aa27.8■■■□□ 2.04
TSLP-203ENST00000420978 HMGXB3Q12766 1538 aa27.8■■■□□ 2.04
TSLP-203ENST00000420978 CEP164Q9UPV0 1460 aa27.74■■■□□ 2.03
TSLP-203ENST00000420978 PELP1Q8IZL8 1130 aaKnown RBP27.72■■■□□ 2.03
TSLP-203ENST00000420978 TOP2BQ02880 1626 aa27.71■■■□□ 2.03
TSLP-203ENST00000420978 CUX1P39880 1505 aa27.68■■■□□ 2.02
TSLP-203ENST00000420978 CCER1Q8TC90 406 aaPredicted RBP27.67■■■□□ 2.02
TSLP-203ENST00000420978 CFTRP13569 1480 aa27.66■■■□□ 2.02
TSLP-203ENST00000420978 CLIP1P30622 1438 aa27.66■■■□□ 2.02
TSLP-203ENST00000420978 KIF21BO75037 1637 aa27.58■■■□□ 2.01
TSLP-203ENST00000420978 CC2D2AQ9P2K1 1620 aa27.56■■■□□ 2
TSLP-203ENST00000420978 BIVM-ERCC5R4GMW8 1640 aa27.53■■■□□ 2
TSLP-203ENST00000420978 DNAJC5BQ9UF47 199 aa27.51■■□□□ 1.99
TSLP-203ENST00000420978 CADPSQ9ULU8 1353 aa27.5■■□□□ 1.99
TSLP-203ENST00000420978 HNRNPUL2Q1KMD3 747 aaKnown RBP27.49■■□□□ 1.99
TSLP-203ENST00000420978 MYT1Q01538 1121 aa27.44■■□□□ 1.98
TSLP-203ENST00000420978 PRXQ9BXM0 1461 aa27.42■■□□□ 1.98
TSLP-203ENST00000420978 KIF27Q86VH2 1401 aa27.42■■□□□ 1.98
TSLP-203ENST00000420978 APLP2Q06481 763 aa27.41■■□□□ 1.98
TSLP-203ENST00000420978 VPS8Q8N3P4 1428 aa27.41■■□□□ 1.98
TSLP-203ENST00000420978 NESP48681 1621 aa27.36■■□□□ 1.97
TSLP-203ENST00000420978 CUX2O14529 1486 aa27.35■■□□□ 1.97
TSLP-203ENST00000420978 KANK4Q5T7N3 995 aaPredicted RBP27.29■■□□□ 1.96
TSLP-203ENST00000420978 FGD5Q6ZNL6 1462 aa27.27■■□□□ 1.96
TSLP-203ENST00000420978 IGF1RP08069 1367 aa27.27■■□□□ 1.96
TSLP-203ENST00000420978 FANCD2Q9BXW9 1451 aa27.24■■□□□ 1.95
TSLP-203ENST00000420978 ARAP1Q96P48 1450 aa27.24■■□□□ 1.95
TSLP-203ENST00000420978 ERICH3Q5RHP9 1530 aa27.21■■□□□ 1.95
TSLP-203ENST00000420978 RAD54L2Q9Y4B4 1467 aa27.19■■□□□ 1.94
TSLP-203ENST00000420978 P3H3Q8IVL6 736 aa27.17■■□□□ 1.94
TSLP-203ENST00000420978 CARMIL1Q5VZK9 1371 aa27.13■■□□□ 1.93
TSLP-203ENST00000420978 ARHGAP35Q9NRY4 1499 aa27.09■■□□□ 1.93
TSLP-203ENST00000420978 PRDM2Q13029 1718 aa27.08■■□□□ 1.93
TSLP-203ENST00000420978 ITGAEP38570 1179 aa27.02■■□□□ 1.92
TSLP-203ENST00000420978 ATP1B4Q9UN42 357 aaPredicted RBP27.02■■□□□ 1.92
TSLP-203ENST00000420978 POLA1P09884 1462 aaPredicted RBP27■■□□□ 1.91
TSLP-203ENST00000420978 TOPBP1Q92547 1522 aa26.99■■□□□ 1.91
TSLP-203ENST00000420978 TDRD9Q8NDG6 1382 aaKnown RBP26.94■■□□□ 1.9
TSLP-203ENST00000420978 URB2Q14146 1524 aaKnown RBP26.89■■□□□ 1.89
TSLP-203ENST00000420978 DNMBPQ6XZF7 1577 aa26.89■■□□□ 1.89
TSLP-203ENST00000420978 DIEXFQ68CQ4 756 aaKnown RBP26.84■■□□□ 1.89
TSLP-203ENST00000420978 ABCA10Q8WWZ4 1543 aa26.82■■□□□ 1.88
TSLP-203ENST00000420978 FHOD3Q2V2M9 1422 aa26.79■■□□□ 1.88
TSLP-203ENST00000420978 LAMC3Q9Y6N6 1575 aa26.73■■□□□ 1.87
TSLP-203ENST00000420978 PDS5BQ9NTI5 1447 aa26.71■■□□□ 1.87
TSLP-203ENST00000420978 ZNF316A6NFI3 1004 aaPredicted RBP26.7■■□□□ 1.86
TSLP-203ENST00000420978 CCNB3Q8WWL7 1395 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms