RNA–Protein interactions for RNA: ENST00000419980.1

AC006960.1-201, humanhuman

BASIC

Gene AC006960.1, Length 153 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006960.1-201ENST00000419980 AEBP2Q6ZN18 517 aaPredicted RBP24.64■■□□□ 1.54
AC006960.1-201ENST00000419980 CHIC1Q5VXU3 224 aa23.08■■□□□ 1.29
AC006960.1-201ENST00000419980 SENP3Q9H4L4 574 aaPredicted RBP21.04■□□□□ 0.96
AC006960.1-201ENST00000419980 PHF23Q9BUL5 403 aaPredicted RBP20.72■□□□□ 0.91
AC006960.1-201ENST00000419980 FOXD1Q16676 465 aa19.66■□□□□ 0.74
AC006960.1-201ENST00000419980 POTEDQ86YR6 584 aa18.6■□□□□ 0.57
AC006960.1-201ENST00000419980 MSH5O43196 834 aa18.5■□□□□ 0.55
AC006960.1-201ENST00000419980 PIAS4Q8N2W9 510 aaPredicted RBP18.29■□□□□ 0.52
AC006960.1-201ENST00000419980 PLPPR3Q6T4P5 718 aa18.28■□□□□ 0.52
AC006960.1-201ENST00000419980 PPP6R1Q9UPN7 881 aa18.15■□□□□ 0.5
AC006960.1-201ENST00000419980 ADRA2BP18089 450 aa18.07■□□□□ 0.48
AC006960.1-201ENST00000419980 MAPK8IP2Q13387 824 aaPredicted RBP16.7■□□□□ 0.26
AC006960.1-201ENST00000419980 DMRT2Q9Y5R5 561 aa16.64■□□□□ 0.25
AC006960.1-201ENST00000419980 SCAF1Q9H7N4 1312 aaKnown RBP16.49■□□□□ 0.23
AC006960.1-201ENST00000419980 CACNB1Q02641 598 aaPredicted RBP16.06■□□□□ 0.16
AC006960.1-201ENST00000419980 PPP4R3CPQ6ZMV5 832 aa16.05■□□□□ 0.16
AC006960.1-201ENST00000419980 DCAF8L1A6NGE4 600 aa15.95■□□□□ 0.14
AC006960.1-201ENST00000419980 HOXD11P31277 338 aaPredicted RBP15.91■□□□□ 0.14
AC006960.1-201ENST00000419980 RNF39Q9H2S5 420 aa15.78■□□□□ 0.12
AC006960.1-201ENST00000419980 KCNA4P22459 653 aa15.77■□□□□ 0.12
AC006960.1-201ENST00000419980 CNKSR2Q8WXI2 1034 aa15.76■□□□□ 0.11
AC006960.1-201ENST00000419980 RNF216Q9NWF9 866 aaPredicted RBP15.7■□□□□ 0.1
AC006960.1-201ENST00000419980 NCBP3Q53F19 620 aaKnown RBP15.65■□□□□ 0.1
AC006960.1-201ENST00000419980 C1QBPQ07021 282 aaKnown RBP15.51■□□□□ 0.07
AC006960.1-201ENST00000419980 NPM3O75607 178 aaKnown RBP15.43■□□□□ 0.06
AC006960.1-201ENST00000419980 DNAJC5BQ9UF47 199 aa15.41■□□□□ 0.06
AC006960.1-201ENST00000419980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.14■□□□□ 0.01
AC006960.1-201ENST00000419980 SLC4A1APQ9BWU0 796 aaKnown RBP15.02■□□□□ -0
AC006960.1-201ENST00000419980 U3KPZ7 1027 aaPredicted RBP14.81□□□□□ -0.04
AC006960.1-201ENST00000419980 SPINK5Q9NQ38 1064 aaPredicted RBP14.69□□□□□ -0.06
AC006960.1-201ENST00000419980 DSG3P32926 999 aa14.66□□□□□ -0.06
AC006960.1-201ENST00000419980 CAPN15O75808 1086 aa14.65□□□□□ -0.06
AC006960.1-201ENST00000419980 EHMT2Q96KQ7 1210 aa14.65□□□□□ -0.06
AC006960.1-201ENST00000419980 SLC4A2P04920 1241 aa14.56□□□□□ -0.08
AC006960.1-201ENST00000419980 ZBTB22O15209 634 aa14.53□□□□□ -0.08
AC006960.1-201ENST00000419980 CSRNP3Q8WYN3 585 aa14.52□□□□□ -0.09
AC006960.1-201ENST00000419980 POTEHQ6S545 545 aa14.51□□□□□ -0.09
AC006960.1-201ENST00000419980 FOXD4L1Q9NU39 408 aa14.5□□□□□ -0.09
AC006960.1-201ENST00000419980 TRHP20396 242 aaPredicted RBP14.35□□□□□ -0.11
AC006960.1-201ENST00000419980 APLP2Q06481 763 aa14.32□□□□□ -0.12
AC006960.1-201ENST00000419980 ABCB7O75027 752 aa14.31□□□□□ -0.12
AC006960.1-201ENST00000419980 ZNF219Q9P2Y4 722 aaPredicted RBP14.31□□□□□ -0.12
AC006960.1-201ENST00000419980 MYCNP04198 464 aaPredicted RBP14.26□□□□□ -0.13
AC006960.1-201ENST00000419980 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.25□□□□□ -0.13
AC006960.1-201ENST00000419980 HNRNPUL2Q1KMD3 747 aaKnown RBP14.25□□□□□ -0.13
AC006960.1-201ENST00000419980 SAMD1Q6SPF0 538 aaPredicted RBP14.16□□□□□ -0.14
AC006960.1-201ENST00000419980 ATXN8OSP0DMR3 200 aa14.03□□□□□ -0.16
AC006960.1-201ENST00000419980 RBM42Q9BTD8 480 aaKnown RBP13.98□□□□□ -0.17
AC006960.1-201ENST00000419980 POLA2Q14181 598 aa13.89□□□□□ -0.19
AC006960.1-201ENST00000419980 ATF5Q9Y2D1 282 aaPredicted RBP13.86□□□□□ -0.19
AC006960.1-201ENST00000419980 CHRDL2Q6WN34 429 aa13.81□□□□□ -0.2
AC006960.1-201ENST00000419980 AKT1S1Q96B36 256 aa13.6□□□□□ -0.23
AC006960.1-201ENST00000419980 ZBTB12Q9Y330 459 aaPredicted RBP13.58□□□□□ -0.24
AC006960.1-201ENST00000419980 OSCARQ8IYS5 282 aa13.49□□□□□ -0.25
AC006960.1-201ENST00000419980 REM2Q8IYK8 340 aaPredicted RBP13.48□□□□□ -0.25
AC006960.1-201ENST00000419980 SP7Q8TDD2 431 aaPredicted RBP13.45□□□□□ -0.26
AC006960.1-201ENST00000419980 PIP4P2Q8N4L2 257 aa13.43□□□□□ -0.26
AC006960.1-201ENST00000419980 PITPNM1O00562 1244 aa13.35□□□□□ -0.27
AC006960.1-201ENST00000419980 FXR2P51116 673 aaKnown RBP eCLIP13.29□□□□□ -0.28
AC006960.1-201ENST00000419980 MKRN4PQ13434 485 aaPredicted RBP13.28□□□□□ -0.28
AC006960.1-201ENST00000419980 FBLN2P98095 1184 aa13.26□□□□□ -0.29
AC006960.1-201ENST00000419980 HAX1O00165 279 aa13.24□□□□□ -0.29
AC006960.1-201ENST00000419980 SPDYE2BA6NHP3 402 aa13.15□□□□□ -0.3
AC006960.1-201ENST00000419980 SPDYE6P0CI01 402 aa13.15□□□□□ -0.3
AC006960.1-201ENST00000419980 SPDYE2Q495Y8 402 aa13.15□□□□□ -0.3
AC006960.1-201ENST00000419980 EVX2Q03828 476 aa13.09□□□□□ -0.31
AC006960.1-201ENST00000419980 FKBP8Q14318 412 aa13.07□□□□□ -0.32
AC006960.1-201ENST00000419980 SPDYE4A6NLX3 237 aa13□□□□□ -0.33
AC006960.1-201ENST00000419980 PRKAR2AP13861 404 aaKnown RBP12.99□□□□□ -0.33
AC006960.1-201ENST00000419980 SPDYE1Q8NFV5 336 aaPredicted RBP12.99□□□□□ -0.33
AC006960.1-201ENST00000419980 CLEC11AQ9Y240 323 aa12.98□□□□□ -0.33
AC006960.1-201ENST00000419980 SSUH2Q9Y2M2 353 aa12.96□□□□□ -0.33
AC006960.1-201ENST00000419980 ZNF692Q9BU19 519 aaPredicted RBP12.93□□□□□ -0.34
AC006960.1-201ENST00000419980 C19orf67A6NJJ6 358 aa12.88□□□□□ -0.35
AC006960.1-201ENST00000419980 PROM2Q8N271 834 aa12.88□□□□□ -0.35
AC006960.1-201ENST00000419980 CHADLQ6NUI6 762 aa12.79□□□□□ -0.36
AC006960.1-201ENST00000419980 GABBR2O75899 941 aa12.76□□□□□ -0.37
AC006960.1-201ENST00000419980 PABPN1Q86U42 306 aaKnown RBP eCLIP12.74□□□□□ -0.37
AC006960.1-201ENST00000419980 PRR29P0C7W0 189 aa12.72□□□□□ -0.37
AC006960.1-201ENST00000419980 FBXO3Q9UK99 471 aa12.63□□□□□ -0.39
AC006960.1-201ENST00000419980 LHX8Q68G74 356 aa12.61□□□□□ -0.39
AC006960.1-201ENST00000419980 CD44P16070 742 aaKnown RBP12.56□□□□□ -0.4
AC006960.1-201ENST00000419980 FARP1Q9Y4F1 1045 aaPredicted RBP12.56□□□□□ -0.4
AC006960.1-201ENST00000419980 STAG3Q9UJ98 1225 aa12.55□□□□□ -0.4
AC006960.1-201ENST00000419980 POTEIP0CG38 1075 aa12.51□□□□□ -0.41
AC006960.1-201ENST00000419980 VASPP50552 380 aaPredicted RBP12.44□□□□□ -0.42
AC006960.1-201ENST00000419980 CLCN6P51797 869 aa12.43□□□□□ -0.42
AC006960.1-201ENST00000419980 ZNF579Q8NAF0 562 aaKnown RBP12.36□□□□□ -0.43
AC006960.1-201ENST00000419980 CREBZFQ9NS37 354 aa12.36□□□□□ -0.43
AC006960.1-201ENST00000419980 DCBLD2Q96PD2 775 aa12.33□□□□□ -0.44
AC006960.1-201ENST00000419980 ZRANB1Q9UGI0 708 aa12.33□□□□□ -0.44
AC006960.1-201ENST00000419980 MIER1Q8N108 512 aa12.3□□□□□ -0.44
AC006960.1-201ENST00000419980 IFNLR1Q8IU57 520 aaPredicted RBP12.29□□□□□ -0.44
AC006960.1-201ENST00000419980 PLCD3Q8N3E9 789 aa12.27□□□□□ -0.45
AC006960.1-201ENST00000419980 GALR2O43603 387 aaPredicted RBP12.23□□□□□ -0.45
AC006960.1-201ENST00000419980 PLEKHG5O94827 1062 aa12.23□□□□□ -0.45
AC006960.1-201ENST00000419980 ZBTB47Q9UFB7 747 aaPredicted RBP12.19□□□□□ -0.46
AC006960.1-201ENST00000419980 MNX1P50219 401 aaPredicted RBP12.17□□□□□ -0.46
AC006960.1-201ENST00000419980 PHF12Q96QT6 1004 aa12.16□□□□□ -0.46
AC006960.1-201ENST00000419980 KLHL34Q8N239 644 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms