RNA–Protein interactions for RNA: ENST00000419371.2

PCDH9-AS2-201, PCDH9 antisense RNA 2, humanhuman

TSL 3 BASIC

Gene PCDH9-AS2, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-AS2-201ENST00000419371 AEBP2Q6ZN18 517 aaPredicted RBP26.11■■□□□ 1.77
PCDH9-AS2-201ENST00000419371 CHIC1Q5VXU3 224 aa24.85■■□□□ 1.57
PCDH9-AS2-201ENST00000419371 SENP3Q9H4L4 574 aaPredicted RBP22.27■■□□□ 1.16
PCDH9-AS2-201ENST00000419371 PHF23Q9BUL5 403 aaPredicted RBP22■■□□□ 1.11
PCDH9-AS2-201ENST00000419371 FOXD1Q16676 465 aa20.75■□□□□ 0.91
PCDH9-AS2-201ENST00000419371 PLPPR3Q6T4P5 718 aa19.9■□□□□ 0.78
PCDH9-AS2-201ENST00000419371 PIAS4Q8N2W9 510 aaPredicted RBP19.46■□□□□ 0.71
PCDH9-AS2-201ENST00000419371 PPP6R1Q9UPN7 881 aa19.46■□□□□ 0.71
PCDH9-AS2-201ENST00000419371 ADRA2BP18089 450 aa19.43■□□□□ 0.7
PCDH9-AS2-201ENST00000419371 MSH5O43196 834 aa19.39■□□□□ 0.69
PCDH9-AS2-201ENST00000419371 POTEDQ86YR6 584 aa18.89■□□□□ 0.61
PCDH9-AS2-201ENST00000419371 MAPK8IP2Q13387 824 aaPredicted RBP17.83■□□□□ 0.44
PCDH9-AS2-201ENST00000419371 SCAF1Q9H7N4 1312 aaKnown RBP17.75■□□□□ 0.43
PCDH9-AS2-201ENST00000419371 DMRT2Q9Y5R5 561 aa17.66■□□□□ 0.42
PCDH9-AS2-201ENST00000419371 PPP4R3CPQ6ZMV5 832 aa17.47■□□□□ 0.39
PCDH9-AS2-201ENST00000419371 CNKSR2Q8WXI2 1034 aa17.11■□□□□ 0.33
PCDH9-AS2-201ENST00000419371 DCAF8L1A6NGE4 600 aa17.06■□□□□ 0.32
PCDH9-AS2-201ENST00000419371 HOXD11P31277 338 aaPredicted RBP17.01■□□□□ 0.31
PCDH9-AS2-201ENST00000419371 RNF216Q9NWF9 866 aaPredicted RBP16.92■□□□□ 0.3
PCDH9-AS2-201ENST00000419371 NCBP3Q53F19 620 aaKnown RBP16.82■□□□□ 0.28
PCDH9-AS2-201ENST00000419371 CACNB1Q02641 598 aaPredicted RBP16.65■□□□□ 0.26
PCDH9-AS2-201ENST00000419371 NPM3O75607 178 aaKnown RBP16.58■□□□□ 0.24
PCDH9-AS2-201ENST00000419371 RNF39Q9H2S5 420 aa16.53■□□□□ 0.24
PCDH9-AS2-201ENST00000419371 KCNA4P22459 653 aa16.34■□□□□ 0.21
PCDH9-AS2-201ENST00000419371 DNAJC5BQ9UF47 199 aa16.34■□□□□ 0.21
PCDH9-AS2-201ENST00000419371 C1QBPQ07021 282 aaKnown RBP16.3■□□□□ 0.2
PCDH9-AS2-201ENST00000419371 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.3■□□□□ 0.2
PCDH9-AS2-201ENST00000419371 U3KPZ7 1027 aaPredicted RBP15.92■□□□□ 0.14
PCDH9-AS2-201ENST00000419371 SLC4A2P04920 1241 aa15.79■□□□□ 0.12
PCDH9-AS2-201ENST00000419371 CAPN15O75808 1086 aa15.7■□□□□ 0.1
PCDH9-AS2-201ENST00000419371 SPINK5Q9NQ38 1064 aaPredicted RBP15.7■□□□□ 0.1
PCDH9-AS2-201ENST00000419371 DSG3P32926 999 aa15.52■□□□□ 0.08
PCDH9-AS2-201ENST00000419371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.48■□□□□ 0.07
PCDH9-AS2-201ENST00000419371 TRHP20396 242 aaPredicted RBP15.48■□□□□ 0.07
PCDH9-AS2-201ENST00000419371 APLP2Q06481 763 aa15.48■□□□□ 0.07
PCDH9-AS2-201ENST00000419371 HNRNPUL2Q1KMD3 747 aaKnown RBP15.48■□□□□ 0.07
PCDH9-AS2-201ENST00000419371 SLC4A1APQ9BWU0 796 aaKnown RBP15.45■□□□□ 0.06
PCDH9-AS2-201ENST00000419371 SAMD1Q6SPF0 538 aaPredicted RBP15.41■□□□□ 0.06
PCDH9-AS2-201ENST00000419371 ZNF219Q9P2Y4 722 aaPredicted RBP15.38■□□□□ 0.05
PCDH9-AS2-201ENST00000419371 ABCB7O75027 752 aa15.36■□□□□ 0.05
PCDH9-AS2-201ENST00000419371 MYCNP04198 464 aaPredicted RBP15.32■□□□□ 0.04
PCDH9-AS2-201ENST00000419371 FOXD4L1Q9NU39 408 aa15.21■□□□□ 0.03
PCDH9-AS2-201ENST00000419371 POLA2Q14181 598 aa15.04■□□□□ -0
PCDH9-AS2-201ENST00000419371 ZBTB22O15209 634 aa15.01□□□□□ -0.01
PCDH9-AS2-201ENST00000419371 ATF5Q9Y2D1 282 aaPredicted RBP14.98□□□□□ -0.01
PCDH9-AS2-201ENST00000419371 RBM42Q9BTD8 480 aaKnown RBP14.82□□□□□ -0.04
PCDH9-AS2-201ENST00000419371 POTEHQ6S545 545 aa14.78□□□□□ -0.04
PCDH9-AS2-201ENST00000419371 ZBTB12Q9Y330 459 aaPredicted RBP14.71□□□□□ -0.05
PCDH9-AS2-201ENST00000419371 ATXN8OSP0DMR3 200 aa14.68□□□□□ -0.06
PCDH9-AS2-201ENST00000419371 OSCARQ8IYS5 282 aa14.58□□□□□ -0.08
PCDH9-AS2-201ENST00000419371 CHRDL2Q6WN34 429 aa14.49□□□□□ -0.09
PCDH9-AS2-201ENST00000419371 AKT1S1Q96B36 256 aa14.48□□□□□ -0.09
PCDH9-AS2-201ENST00000419371 FBLN2P98095 1184 aa14.42□□□□□ -0.1
PCDH9-AS2-201ENST00000419371 REM2Q8IYK8 340 aaPredicted RBP14.37□□□□□ -0.11
PCDH9-AS2-201ENST00000419371 CSRNP3Q8WYN3 585 aa14.37□□□□□ -0.11
PCDH9-AS2-201ENST00000419371 EHMT2Q96KQ7 1210 aa14.32□□□□□ -0.12
PCDH9-AS2-201ENST00000419371 MKRN4PQ13434 485 aaPredicted RBP14.28□□□□□ -0.12
PCDH9-AS2-201ENST00000419371 SPDYE2BA6NHP3 402 aa14.25□□□□□ -0.13
PCDH9-AS2-201ENST00000419371 SPDYE6P0CI01 402 aa14.25□□□□□ -0.13
PCDH9-AS2-201ENST00000419371 SPDYE2Q495Y8 402 aa14.25□□□□□ -0.13
PCDH9-AS2-201ENST00000419371 PITPNM1O00562 1244 aa14.23□□□□□ -0.13
PCDH9-AS2-201ENST00000419371 PIP4P2Q8N4L2 257 aa14.15□□□□□ -0.14
PCDH9-AS2-201ENST00000419371 ZNF692Q9BU19 519 aaPredicted RBP14.14□□□□□ -0.15
PCDH9-AS2-201ENST00000419371 CLEC11AQ9Y240 323 aa14.05□□□□□ -0.16
PCDH9-AS2-201ENST00000419371 SSUH2Q9Y2M2 353 aa14.05□□□□□ -0.16
PCDH9-AS2-201ENST00000419371 FXR2P51116 673 aaKnown RBP eCLIP14.04□□□□□ -0.16
PCDH9-AS2-201ENST00000419371 SPDYE1Q8NFV5 336 aaPredicted RBP14.01□□□□□ -0.17
PCDH9-AS2-201ENST00000419371 PABPN1Q86U42 306 aaKnown RBP eCLIP13.94□□□□□ -0.18
PCDH9-AS2-201ENST00000419371 HAX1O00165 279 aa13.92□□□□□ -0.18
PCDH9-AS2-201ENST00000419371 PRKAR2AP13861 404 aaKnown RBP13.88□□□□□ -0.19
PCDH9-AS2-201ENST00000419371 SP7Q8TDD2 431 aaPredicted RBP13.88□□□□□ -0.19
PCDH9-AS2-201ENST00000419371 PRR29P0C7W0 189 aa13.79□□□□□ -0.2
PCDH9-AS2-201ENST00000419371 CHADLQ6NUI6 762 aa13.75□□□□□ -0.21
PCDH9-AS2-201ENST00000419371 EVX2Q03828 476 aa13.71□□□□□ -0.21
PCDH9-AS2-201ENST00000419371 SPDYE4A6NLX3 237 aa13.68□□□□□ -0.22
PCDH9-AS2-201ENST00000419371 C19orf67A6NJJ6 358 aa13.59□□□□□ -0.23
PCDH9-AS2-201ENST00000419371 STAG3Q9UJ98 1225 aa13.52□□□□□ -0.25
PCDH9-AS2-201ENST00000419371 FARP1Q9Y4F1 1045 aaPredicted RBP13.51□□□□□ -0.25
PCDH9-AS2-201ENST00000419371 CD44P16070 742 aaKnown RBP13.44□□□□□ -0.26
PCDH9-AS2-201ENST00000419371 CREBZFQ9NS37 354 aa13.42□□□□□ -0.26
PCDH9-AS2-201ENST00000419371 GABBR2O75899 941 aa13.4□□□□□ -0.26
PCDH9-AS2-201ENST00000419371 ZRANB1Q9UGI0 708 aa13.28□□□□□ -0.28
PCDH9-AS2-201ENST00000419371 PROM2Q8N271 834 aa13.26□□□□□ -0.29
PCDH9-AS2-201ENST00000419371 NPM1P06748 294 aaKnown RBP eCLIP13.2□□□□□ -0.3
PCDH9-AS2-201ENST00000419371 ZNF579Q8NAF0 562 aaKnown RBP13.19□□□□□ -0.3
PCDH9-AS2-201ENST00000419371 PAK3O75914 559 aaPredicted RBP13.18□□□□□ -0.3
PCDH9-AS2-201ENST00000419371 MNX1P50219 401 aaPredicted RBP13.17□□□□□ -0.3
PCDH9-AS2-201ENST00000419371 CLCN6P51797 869 aa13.14□□□□□ -0.31
PCDH9-AS2-201ENST00000419371 POTEIP0CG38 1075 aa13.1□□□□□ -0.31
PCDH9-AS2-201ENST00000419371 DCBLD2Q96PD2 775 aa13.1□□□□□ -0.31
PCDH9-AS2-201ENST00000419371 PHF12Q96QT6 1004 aa13.1□□□□□ -0.31
PCDH9-AS2-201ENST00000419371 FKBP8Q14318 412 aa13.09□□□□□ -0.31
PCDH9-AS2-201ENST00000419371 GALR2O43603 387 aaPredicted RBP13.07□□□□□ -0.32
PCDH9-AS2-201ENST00000419371 MIER1Q8N108 512 aa13.06□□□□□ -0.32
PCDH9-AS2-201ENST00000419371 PLEKHG5O94827 1062 aa13.05□□□□□ -0.32
PCDH9-AS2-201ENST00000419371 LHX8Q68G74 356 aa13.03□□□□□ -0.32
PCDH9-AS2-201ENST00000419371 TSPYL2Q9H2G4 693 aaPredicted RBP13.02□□□□□ -0.33
PCDH9-AS2-201ENST00000419371 PLCD3Q8N3E9 789 aa12.98□□□□□ -0.33
PCDH9-AS2-201ENST00000419371 MS4A3Q96HJ5 214 aa12.91□□□□□ -0.34
PCDH9-AS2-201ENST00000419371 CCDC61Q9Y6R9 512 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms