RNA–Protein interactions for RNA: ENST00000418674.1

PTPRC-207, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-207ENST00000418674 AEBP2Q6ZN18 517 aaPredicted RBP16.74■□□□□ 0.27
PTPRC-207ENST00000418674 CHIC1Q5VXU3 224 aa16.19■□□□□ 0.18
PTPRC-207ENST00000418674 SENP3Q9H4L4 574 aaPredicted RBP14.29□□□□□ -0.12
PTPRC-207ENST00000418674 PHF23Q9BUL5 403 aaPredicted RBP14.17□□□□□ -0.14
PTPRC-207ENST00000418674 FOXD1Q16676 465 aa13.25□□□□□ -0.29
PTPRC-207ENST00000418674 PLPPR3Q6T4P5 718 aa13.08□□□□□ -0.32
PTPRC-207ENST00000418674 POTEDQ86YR6 584 aa12.86□□□□□ -0.35
PTPRC-207ENST00000418674 ADRA2BP18089 450 aa12.57□□□□□ -0.4
PTPRC-207ENST00000418674 PPP6R1Q9UPN7 881 aa12.57□□□□□ -0.4
PTPRC-207ENST00000418674 PIAS4Q8N2W9 510 aaPredicted RBP12.48□□□□□ -0.41
PTPRC-207ENST00000418674 MSH5O43196 834 aa12.44□□□□□ -0.42
PTPRC-207ENST00000418674 SCAF1Q9H7N4 1312 aaKnown RBP11.56□□□□□ -0.56
PTPRC-207ENST00000418674 PPP4R3CPQ6ZMV5 832 aa11.48□□□□□ -0.57
PTPRC-207ENST00000418674 MAPK8IP2Q13387 824 aaPredicted RBP11.45□□□□□ -0.58
PTPRC-207ENST00000418674 DMRT2Q9Y5R5 561 aa11.36□□□□□ -0.59
PTPRC-207ENST00000418674 CNKSR2Q8WXI2 1034 aa11.22□□□□□ -0.61
PTPRC-207ENST00000418674 NCBP3Q53F19 620 aaKnown RBP11.15□□□□□ -0.62
PTPRC-207ENST00000418674 HOXD11P31277 338 aaPredicted RBP11.04□□□□□ -0.64
PTPRC-207ENST00000418674 RNF216Q9NWF9 866 aaPredicted RBP11.04□□□□□ -0.64
PTPRC-207ENST00000418674 KCNA4P22459 653 aa10.96□□□□□ -0.65
PTPRC-207ENST00000418674 NPM3O75607 178 aaKnown RBP10.95□□□□□ -0.66
PTPRC-207ENST00000418674 CACNB1Q02641 598 aaPredicted RBP10.94□□□□□ -0.66
PTPRC-207ENST00000418674 DCAF8L1A6NGE4 600 aa10.91□□□□□ -0.66
PTPRC-207ENST00000418674 DNAJC5BQ9UF47 199 aa10.66□□□□□ -0.7
PTPRC-207ENST00000418674 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.55□□□□□ -0.72
PTPRC-207ENST00000418674 RNF39Q9H2S5 420 aa10.53□□□□□ -0.72
PTPRC-207ENST00000418674 SLC4A1APQ9BWU0 796 aaKnown RBP10.43□□□□□ -0.74
PTPRC-207ENST00000418674 C1QBPQ07021 282 aaKnown RBP10.41□□□□□ -0.74
PTPRC-207ENST00000418674 SLC4A2P04920 1241 aa10.37□□□□□ -0.75
PTPRC-207ENST00000418674 U3KPZ7 1027 aaPredicted RBP10.32□□□□□ -0.76
PTPRC-207ENST00000418674 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.18□□□□□ -0.78
PTPRC-207ENST00000418674 HNRNPUL2Q1KMD3 747 aaKnown RBP10.18□□□□□ -0.78
PTPRC-207ENST00000418674 FOXD4L1Q9NU39 408 aa10.18□□□□□ -0.78
PTPRC-207ENST00000418674 MYCNP04198 464 aaPredicted RBP10.15□□□□□ -0.78
PTPRC-207ENST00000418674 APLP2Q06481 763 aa10.14□□□□□ -0.79
PTPRC-207ENST00000418674 SAMD1Q6SPF0 538 aaPredicted RBP10.12□□□□□ -0.79
PTPRC-207ENST00000418674 CAPN15O75808 1086 aa10.1□□□□□ -0.79
PTPRC-207ENST00000418674 SPINK5Q9NQ38 1064 aaPredicted RBP10.09□□□□□ -0.79
PTPRC-207ENST00000418674 ZBTB22O15209 634 aa10.06□□□□□ -0.8
PTPRC-207ENST00000418674 POTEHQ6S545 545 aa10.02□□□□□ -0.81
PTPRC-207ENST00000418674 ZNF219Q9P2Y4 722 aaPredicted RBP10.01□□□□□ -0.81
PTPRC-207ENST00000418674 TRHP20396 242 aaPredicted RBP10□□□□□ -0.81
PTPRC-207ENST00000418674 DSG3P32926 999 aa9.95□□□□□ -0.82
PTPRC-207ENST00000418674 EHMT2Q96KQ7 1210 aa9.89□□□□□ -0.83
PTPRC-207ENST00000418674 ABCB7O75027 752 aa9.87□□□□□ -0.83
PTPRC-207ENST00000418674 ATXN8OSP0DMR3 200 aa9.85□□□□□ -0.83
PTPRC-207ENST00000418674 CSRNP3Q8WYN3 585 aa9.85□□□□□ -0.83
PTPRC-207ENST00000418674 ATF5Q9Y2D1 282 aaPredicted RBP9.84□□□□□ -0.83
PTPRC-207ENST00000418674 POLA2Q14181 598 aa9.77□□□□□ -0.85
PTPRC-207ENST00000418674 ZBTB12Q9Y330 459 aaPredicted RBP9.64□□□□□ -0.87
PTPRC-207ENST00000418674 RBM42Q9BTD8 480 aaKnown RBP9.54□□□□□ -0.88
PTPRC-207ENST00000418674 FBLN2P98095 1184 aa9.51□□□□□ -0.89
PTPRC-207ENST00000418674 OSCARQ8IYS5 282 aa9.45□□□□□ -0.9
PTPRC-207ENST00000418674 MKRN4PQ13434 485 aaPredicted RBP9.4□□□□□ -0.9
PTPRC-207ENST00000418674 AKT1S1Q96B36 256 aa9.35□□□□□ -0.91
PTPRC-207ENST00000418674 SPDYE2BA6NHP3 402 aa9.34□□□□□ -0.91
PTPRC-207ENST00000418674 SPDYE6P0CI01 402 aa9.34□□□□□ -0.91
PTPRC-207ENST00000418674 SPDYE2Q495Y8 402 aa9.34□□□□□ -0.91
PTPRC-207ENST00000418674 ZNF692Q9BU19 519 aaPredicted RBP9.27□□□□□ -0.93
PTPRC-207ENST00000418674 CHRDL2Q6WN34 429 aa9.25□□□□□ -0.93
PTPRC-207ENST00000418674 REM2Q8IYK8 340 aaPredicted RBP9.25□□□□□ -0.93
PTPRC-207ENST00000418674 SSUH2Q9Y2M2 353 aa9.22□□□□□ -0.93
PTPRC-207ENST00000418674 SP7Q8TDD2 431 aaPredicted RBP9.17□□□□□ -0.94
PTPRC-207ENST00000418674 SPDYE4A6NLX3 237 aa9.14□□□□□ -0.95
PTPRC-207ENST00000418674 PITPNM1O00562 1244 aa9.14□□□□□ -0.95
PTPRC-207ENST00000418674 PABPN1Q86U42 306 aaKnown RBP eCLIP9.14□□□□□ -0.95
PTPRC-207ENST00000418674 SPDYE1Q8NFV5 336 aaPredicted RBP9.12□□□□□ -0.95
PTPRC-207ENST00000418674 CLEC11AQ9Y240 323 aa9.09□□□□□ -0.95
PTPRC-207ENST00000418674 PIP4P2Q8N4L2 257 aa9.02□□□□□ -0.97
PTPRC-207ENST00000418674 FXR2P51116 673 aaKnown RBP eCLIP9.01□□□□□ -0.97
PTPRC-207ENST00000418674 PRR29P0C7W0 189 aa8.98□□□□□ -0.97
PTPRC-207ENST00000418674 STAG3Q9UJ98 1225 aa8.97□□□□□ -0.97
PTPRC-207ENST00000418674 FKBP8Q14318 412 aa8.95□□□□□ -0.98
PTPRC-207ENST00000418674 PROM2Q8N271 834 aa8.93□□□□□ -0.98
PTPRC-207ENST00000418674 HAX1O00165 279 aa8.92□□□□□ -0.98
PTPRC-207ENST00000418674 PRKAR2AP13861 404 aaKnown RBP8.92□□□□□ -0.98
PTPRC-207ENST00000418674 CHADLQ6NUI6 762 aa8.86□□□□□ -0.99
PTPRC-207ENST00000418674 CREBZFQ9NS37 354 aa8.79□□□□□ -1
PTPRC-207ENST00000418674 FARP1Q9Y4F1 1045 aaPredicted RBP8.77□□□□□ -1.01
PTPRC-207ENST00000418674 PLEKHG5O94827 1062 aa8.72□□□□□ -1.01
PTPRC-207ENST00000418674 FBXO3Q9UK99 471 aa8.72□□□□□ -1.01
PTPRC-207ENST00000418674 C19orf67A6NJJ6 358 aa8.71□□□□□ -1.02
PTPRC-207ENST00000418674 NPM1P06748 294 aaKnown RBP eCLIP8.69□□□□□ -1.02
PTPRC-207ENST00000418674 MIER1Q8N108 512 aa8.69□□□□□ -1.02
PTPRC-207ENST00000418674 PLCD3Q8N3E9 789 aa8.67□□□□□ -1.02
PTPRC-207ENST00000418674 CD44P16070 742 aaKnown RBP8.66□□□□□ -1.02
PTPRC-207ENST00000418674 EVX2Q03828 476 aa8.66□□□□□ -1.02
PTPRC-207ENST00000418674 MNX1P50219 401 aaPredicted RBP8.65□□□□□ -1.02
PTPRC-207ENST00000418674 PAK3O75914 559 aaPredicted RBP8.61□□□□□ -1.03
PTPRC-207ENST00000418674 ZBTB47Q9UFB7 747 aaPredicted RBP8.61□□□□□ -1.03
PTPRC-207ENST00000418674 LHX8Q68G74 356 aa8.6□□□□□ -1.03
PTPRC-207ENST00000418674 VASPP50552 380 aaPredicted RBP8.58□□□□□ -1.04
PTPRC-207ENST00000418674 ZRANB1Q9UGI0 708 aa8.58□□□□□ -1.04
PTPRC-207ENST00000418674 ZNF579Q8NAF0 562 aaKnown RBP8.53□□□□□ -1.04
PTPRC-207ENST00000418674 CLCN6P51797 869 aa8.52□□□□□ -1.05
PTPRC-207ENST00000418674 GABBR2O75899 941 aa8.51□□□□□ -1.05
PTPRC-207ENST00000418674 TSPYL2Q9H2G4 693 aaPredicted RBP8.51□□□□□ -1.05
PTPRC-207ENST00000418674 KLHL34Q8N239 644 aa8.5□□□□□ -1.05
PTPRC-207ENST00000418674 RASEFQ8IZ41 740 aa8.48□□□□□ -1.05
PTPRC-207ENST00000418674 NUBP1P53384 320 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms