RNA–Protein interactions for RNA: ENST00000418194.6

SP3-203, Transcript of Sp3 transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-203ENST00000418194 NISCHQ9Y2I1 1504 aa31.31■■■□□ 2.6
SP3-203ENST00000418194 DCAF8L2P0C7V8 631 aa30.31■■■□□ 2.44
SP3-203ENST00000418194 SUPT5HO00267 1087 aaKnown RBP30.21■■■□□ 2.43
SP3-203ENST00000418194 SHROOM4Q9ULL8 1493 aa30.09■■■□□ 2.41
SP3-203ENST00000418194 EHMT2Q96KQ7 1210 aa29.05■■■□□ 2.24
SP3-203ENST00000418194 PCGF6Q9BYE7 350 aa28.96■■■□□ 2.23
SP3-203ENST00000418194 FAM9AQ8IZU1 332 aaPredicted RBP28.38■■■□□ 2.13
SP3-203ENST00000418194 PPARGC1BQ86YN6 1023 aaKnown RBP28.24■■■□□ 2.11
SP3-203ENST00000418194 TTBK1Q5TCY1 1321 aaPredicted RBP28.08■■■□□ 2.09
SP3-203ENST00000418194 HRCP23327 699 aa28.06■■■□□ 2.08
SP3-203ENST00000418194 LOC105371045A0A1W2PR82 267 aa28.02■■■□□ 2.08
SP3-203ENST00000418194 CHIC1Q5VXU3 224 aa27.92■■■□□ 2.06
SP3-203ENST00000418194 TRIM41Q8WV44 630 aa27.56■■■□□ 2
SP3-203ENST00000418194 TRIM26Q12899 539 aaPredicted RBP27.35■■□□□ 1.97
SP3-203ENST00000418194 CCER1Q8TC90 406 aaPredicted RBP27.33■■□□□ 1.96
SP3-203ENST00000418194 RANGAP1P46060 587 aaPredicted RBP27.22■■□□□ 1.95
SP3-203ENST00000418194 YTHDC1Q96MU7 727 aaKnown RBP27.14■■□□□ 1.94
SP3-203ENST00000418194 ZEB1P37275 1124 aaPredicted RBP27.1■■□□□ 1.93
SP3-203ENST00000418194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.97■■□□□ 1.91
SP3-203ENST00000418194 MYO15BQ96JP2 1530 aa26.92■■□□□ 1.9
SP3-203ENST00000418194 CENPBP07199 599 aaPredicted RBP26.84■■□□□ 1.89
SP3-203ENST00000418194 UBTFP17480 764 aaKnown RBP26.79■■□□□ 1.88
SP3-203ENST00000418194 APLP2Q06481 763 aa26.72■■□□□ 1.87
SP3-203ENST00000418194 PELP1Q8IZL8 1130 aaKnown RBP26.7■■□□□ 1.86
SP3-203ENST00000418194 HNRNPUL2Q1KMD3 747 aaKnown RBP26.51■■□□□ 1.83
SP3-203ENST00000418194 DIEXFQ68CQ4 756 aaKnown RBP26.45■■□□□ 1.83
SP3-203ENST00000418194 GTF3C3Q9Y5Q9 886 aa26.4■■□□□ 1.82
SP3-203ENST00000418194 SCAF1Q9H7N4 1312 aaKnown RBP26.29■■□□□ 1.8
SP3-203ENST00000418194 ITGAEP38570 1179 aa26.22■■□□□ 1.79
SP3-203ENST00000418194 ZCCHC6Q5VYS8 1495 aaKnown RBP26.2■■□□□ 1.78
SP3-203ENST00000418194 ATP1B4Q9UN42 357 aaPredicted RBP26.17■■□□□ 1.78
SP3-203ENST00000418194 DCAF1Q9Y4B6 1507 aa26.11■■□□□ 1.77
SP3-203ENST00000418194 NEUROD1Q13562 356 aa26.11■■□□□ 1.77
SP3-203ENST00000418194 ACIN1Q9UKV3 1341 aaKnown RBP26.09■■□□□ 1.77
SP3-203ENST00000418194 ABCC9O60706 1549 aa25.81■■□□□ 1.72
SP3-203ENST00000418194 BCANQ96GW7 911 aa25.78■■□□□ 1.72
SP3-203ENST00000418194 ZNF316A6NFI3 1004 aaPredicted RBP25.76■■□□□ 1.71
SP3-203ENST00000418194 PABPN1Q86U42 306 aaKnown RBP eCLIP25.74■■□□□ 1.71
SP3-203ENST00000418194 CNGB1Q14028 1251 aaPredicted RBP25.65■■□□□ 1.7
SP3-203ENST00000418194 SCRIBQ14160 1630 aa25.61■■□□□ 1.69
SP3-203ENST00000418194 NEFLP07196 543 aa25.6■■□□□ 1.69
SP3-203ENST00000418194 ERICH6Q7L0X2 663 aa25.56■■□□□ 1.68
SP3-203ENST00000418194 MYT1Q01538 1121 aa25.55■■□□□ 1.68
SP3-203ENST00000418194 MIER1Q8N108 512 aa25.54■■□□□ 1.68
SP3-203ENST00000418194 CSRNP3Q8WYN3 585 aa25.51■■□□□ 1.67
SP3-203ENST00000418194 RSF1Q96T23 1441 aaPredicted RBP25.46■■□□□ 1.67
SP3-203ENST00000418194 CCDC180Q9P1Z9 1646 aa25.35■■□□□ 1.65
SP3-203ENST00000418194 FAM50AQ14320 339 aaKnown RBP25.31■■□□□ 1.64
SP3-203ENST00000418194 POLR3GLQ9BT43 218 aa25.29■■□□□ 1.64
SP3-203ENST00000418194 P3H3Q8IVL6 736 aa25.17■■□□□ 1.62
SP3-203ENST00000418194 HIRIP3Q9BW71 556 aaPredicted RBP25.16■■□□□ 1.62
SP3-203ENST00000418194 CECR2Q9BXF3 1484 aa25.08■■□□□ 1.6
SP3-203ENST00000418194 DDX10Q13206 875 aaKnown RBP25.05■■□□□ 1.6
SP3-203ENST00000418194 CEP162Q5TB80 1403 aa25.05■■□□□ 1.6
SP3-203ENST00000418194 RB1CC1Q8TDY2 1594 aa25.04■■□□□ 1.6
SP3-203ENST00000418194 FKBP8Q14318 412 aa25.04■■□□□ 1.6
SP3-203ENST00000418194 TRIM52Q96A61 297 aa25.01■■□□□ 1.59
SP3-203ENST00000418194 SOGA1O94964 1423 aa24.88■■□□□ 1.57
SP3-203ENST00000418194 ARID3CA6NKF2 412 aa24.87■■□□□ 1.57
SP3-203ENST00000418194 ANP32CO43423 234 aa24.85■■□□□ 1.57
SP3-203ENST00000418194 IRX6P78412 446 aaPredicted RBP24.84■■□□□ 1.57
SP3-203ENST00000418194 CLIP1P30622 1438 aa24.79■■□□□ 1.56
SP3-203ENST00000418194 SENP3-EIF4A1A0A087X0R7 540 aa24.73■■□□□ 1.55
SP3-203ENST00000418194 ZNF326Q5BKZ1 582 aaKnown RBP24.72■■□□□ 1.55
SP3-203ENST00000418194 ABCC8Q09428 1581 aa24.7■■□□□ 1.55
SP3-203ENST00000418194 CCDC88BA6NC98 1476 aa24.68■■□□□ 1.54
SP3-203ENST00000418194 MROH2BQ7Z745 1585 aa24.68■■□□□ 1.54
SP3-203ENST00000418194 SUPT16HQ9Y5B9 1047 aaKnown RBP24.68■■□□□ 1.54
SP3-203ENST00000418194 HNRNPUQ00839 825 aaKnown RBP eCLIP24.65■■□□□ 1.54
SP3-203ENST00000418194 TNIKQ9UKE5 1360 aa24.63■■□□□ 1.53
SP3-203ENST00000418194 SIN3AQ96ST3 1273 aa24.6■■□□□ 1.53
SP3-203ENST00000418194 CDK11AQ9UQ88 783 aaPredicted RBP24.59■■□□□ 1.53
SP3-203ENST00000418194 KCNH8Q96L42 1107 aa24.56■■□□□ 1.52
SP3-203ENST00000418194 FAM9BQ8IZU0 186 aa24.53■■□□□ 1.52
SP3-203ENST00000418194 GOLGA3Q08378 1498 aa24.52■■□□□ 1.52
SP3-203ENST00000418194 CHIC2Q9UKJ5 165 aa24.5■■□□□ 1.51
SP3-203ENST00000418194 KANK4Q5T7N3 995 aaPredicted RBP24.5■■□□□ 1.51
SP3-203ENST00000418194 WRNQ14191 1432 aaPredicted RBP eCLIP24.49■■□□□ 1.51
SP3-203ENST00000418194 RUSC2Q8N2Y8 1516 aa24.48■■□□□ 1.51
SP3-203ENST00000418194 WIZO95785 1651 aa24.4■■□□□ 1.5
SP3-203ENST00000418194 TONSLQ96HA7 1378 aa24.4■■□□□ 1.5
SP3-203ENST00000418194 SALL2Q9Y467 1007 aaPredicted RBP24.4■■□□□ 1.5
SP3-203ENST00000418194 NBR1Q14596 966 aa24.36■■□□□ 1.49
SP3-203ENST00000418194 ANP32EQ9BTT0 268 aa24.36■■□□□ 1.49
SP3-203ENST00000418194 NPM2Q86SE8 214 aaKnown RBP24.35■■□□□ 1.49
SP3-203ENST00000418194 RTL5Q5HYW3 569 aaPredicted RBP24.34■■□□□ 1.49
SP3-203ENST00000418194 TSHZ2Q9NRE2 1034 aa24.3■■□□□ 1.48
SP3-203ENST00000418194 CLSPNQ9HAW4 1339 aa24.27■■□□□ 1.48
SP3-203ENST00000418194 EEA1Q15075 1411 aa24.26■■□□□ 1.47
SP3-203ENST00000418194 RRP7BPQ9NSQ0 103 aa24.24■■□□□ 1.47
SP3-203ENST00000418194 CEP164Q9UPV0 1460 aa24.24■■□□□ 1.47
SP3-203ENST00000418194 DAXXQ9UER7 740 aaPredicted RBP24.23■■□□□ 1.47
SP3-203ENST00000418194 MRS2Q9HD23 443 aa24.19■■□□□ 1.46
SP3-203ENST00000418194 ZNF777Q9ULD5 760 aaPredicted RBP24.19■■□□□ 1.46
SP3-203ENST00000418194 VPS8Q8N3P4 1428 aa24.15■■□□□ 1.46
SP3-203ENST00000418194 BAZ1AQ9NRL2 1556 aaPredicted RBP24.15■■□□□ 1.46
SP3-203ENST00000418194 RBM19Q9Y4C8 960 aaKnown RBP24.13■■□□□ 1.45
SP3-203ENST00000418194 FBLN2P98095 1184 aa24.1■■□□□ 1.45
SP3-203ENST00000418194 MYT1LQ9UL68 1186 aa24.1■■□□□ 1.45
SP3-203ENST00000418194 CCNB3Q8WWL7 1395 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms