RNA–Protein interactions for RNA: ENST00000416605.6

HACE1-204, Transcript of HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best)

Gene HACE1, Length 4,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACE1-204ENST00000416605 NISCHQ9Y2I1 1504 aa29.33■■■□□ 2.29
HACE1-204ENST00000416605 DCAF8L2P0C7V8 631 aa28.5■■■□□ 2.15
HACE1-204ENST00000416605 SUPT5HO00267 1087 aaKnown RBP28.33■■■□□ 2.12
HACE1-204ENST00000416605 SHROOM4Q9ULL8 1493 aa27.88■■■□□ 2.05
HACE1-204ENST00000416605 PCGF6Q9BYE7 350 aa27.26■■□□□ 1.95
HACE1-204ENST00000416605 EHMT2Q96KQ7 1210 aa26.89■■□□□ 1.89
HACE1-204ENST00000416605 PELP1Q8IZL8 1130 aaKnown RBP26.66■■□□□ 1.86
HACE1-204ENST00000416605 ZEB1P37275 1124 aaPredicted RBP26.63■■□□□ 1.85
HACE1-204ENST00000416605 HRCP23327 699 aa26.63■■□□□ 1.85
HACE1-204ENST00000416605 FAM9AQ8IZU1 332 aaPredicted RBP26.53■■□□□ 1.84
HACE1-204ENST00000416605 CENPBP07199 599 aaPredicted RBP26.36■■□□□ 1.81
HACE1-204ENST00000416605 TRIM41Q8WV44 630 aa26.21■■□□□ 1.79
HACE1-204ENST00000416605 CCER1Q8TC90 406 aaPredicted RBP26.18■■□□□ 1.78
HACE1-204ENST00000416605 TRIM26Q12899 539 aaPredicted RBP26.18■■□□□ 1.78
HACE1-204ENST00000416605 CHIC1Q5VXU3 224 aa26.13■■□□□ 1.77
HACE1-204ENST00000416605 TTBK1Q5TCY1 1321 aaPredicted RBP26.13■■□□□ 1.77
HACE1-204ENST00000416605 APLP2Q06481 763 aa26.1■■□□□ 1.77
HACE1-204ENST00000416605 MYT1Q01538 1121 aa26.03■■□□□ 1.76
HACE1-204ENST00000416605 PPARGC1BQ86YN6 1023 aaKnown RBP26.03■■□□□ 1.76
HACE1-204ENST00000416605 LOC105371045A0A1W2PR82 267 aa25.9■■□□□ 1.74
HACE1-204ENST00000416605 YTHDC1Q96MU7 727 aaKnown RBP25.7■■□□□ 1.7
HACE1-204ENST00000416605 UBTFP17480 764 aaKnown RBP25.54■■□□□ 1.68
HACE1-204ENST00000416605 RANGAP1P46060 587 aaPredicted RBP25.44■■□□□ 1.66
HACE1-204ENST00000416605 ERICH6Q7L0X2 663 aa25.35■■□□□ 1.65
HACE1-204ENST00000416605 DIEXFQ68CQ4 756 aaKnown RBP25.25■■□□□ 1.63
HACE1-204ENST00000416605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.25■■□□□ 1.63
HACE1-204ENST00000416605 NEFLP07196 543 aa25.23■■□□□ 1.63
HACE1-204ENST00000416605 GTF3C3Q9Y5Q9 886 aa25.05■■□□□ 1.6
HACE1-204ENST00000416605 HNRNPUL2Q1KMD3 747 aaKnown RBP25■■□□□ 1.59
HACE1-204ENST00000416605 ACIN1Q9UKV3 1341 aaKnown RBP24.91■■□□□ 1.58
HACE1-204ENST00000416605 ATP1B4Q9UN42 357 aaPredicted RBP24.9■■□□□ 1.58
HACE1-204ENST00000416605 DCAF1Q9Y4B6 1507 aa24.9■■□□□ 1.58
HACE1-204ENST00000416605 ITGAEP38570 1179 aa24.7■■□□□ 1.55
HACE1-204ENST00000416605 ZNF316A6NFI3 1004 aaPredicted RBP24.67■■□□□ 1.54
HACE1-204ENST00000416605 MYO15BQ96JP2 1530 aa24.6■■□□□ 1.53
HACE1-204ENST00000416605 SCAF1Q9H7N4 1312 aaKnown RBP24.59■■□□□ 1.53
HACE1-204ENST00000416605 ZCCHC6Q5VYS8 1495 aaKnown RBP24.52■■□□□ 1.52
HACE1-204ENST00000416605 NEUROD1Q13562 356 aa24.47■■□□□ 1.51
HACE1-204ENST00000416605 BCANQ96GW7 911 aa24.35■■□□□ 1.49
HACE1-204ENST00000416605 CSRNP3Q8WYN3 585 aa24.19■■□□□ 1.46
HACE1-204ENST00000416605 CLSPNQ9HAW4 1339 aa24.16■■□□□ 1.46
HACE1-204ENST00000416605 CCDC180Q9P1Z9 1646 aa24.13■■□□□ 1.45
HACE1-204ENST00000416605 POLR3GLQ9BT43 218 aa24.13■■□□□ 1.45
HACE1-204ENST00000416605 FAM50AQ14320 339 aaKnown RBP24.1■■□□□ 1.45
HACE1-204ENST00000416605 ANP32CO43423 234 aa24.09■■□□□ 1.45
HACE1-204ENST00000416605 DAXXQ9UER7 740 aaPredicted RBP24.09■■□□□ 1.45
HACE1-204ENST00000416605 RTL5Q5HYW3 569 aaPredicted RBP24.08■■□□□ 1.45
HACE1-204ENST00000416605 CNGB1Q14028 1251 aaPredicted RBP24.04■■□□□ 1.44
HACE1-204ENST00000416605 CDK11AQ9UQ88 783 aaPredicted RBP24.03■■□□□ 1.44
HACE1-204ENST00000416605 MIER1Q8N108 512 aa23.97■■□□□ 1.43
HACE1-204ENST00000416605 ABCC9O60706 1549 aa23.95■■□□□ 1.42
HACE1-204ENST00000416605 FKBP8Q14318 412 aa23.88■■□□□ 1.41
HACE1-204ENST00000416605 SCRIBQ14160 1630 aa23.82■■□□□ 1.4
HACE1-204ENST00000416605 PABPN1Q86U42 306 aaKnown RBP eCLIP23.8■■□□□ 1.4
HACE1-204ENST00000416605 TRIM52Q96A61 297 aa23.77■■□□□ 1.4
HACE1-204ENST00000416605 RSF1Q96T23 1441 aaPredicted RBP23.73■■□□□ 1.39
HACE1-204ENST00000416605 DDX10Q13206 875 aaKnown RBP23.69■■□□□ 1.38
HACE1-204ENST00000416605 CEP162Q5TB80 1403 aa23.61■■□□□ 1.37
HACE1-204ENST00000416605 HNRNPUQ00839 825 aaKnown RBP eCLIP23.55■■□□□ 1.36
HACE1-204ENST00000416605 ANP32AP39687 249 aaKnown RBP23.55■■□□□ 1.36
HACE1-204ENST00000416605 CLIP1P30622 1438 aa23.51■■□□□ 1.35
HACE1-204ENST00000416605 ANP32EQ9BTT0 268 aa23.5■■□□□ 1.35
HACE1-204ENST00000416605 P3H3Q8IVL6 736 aa23.49■■□□□ 1.35
HACE1-204ENST00000416605 TONSLQ96HA7 1378 aa23.49■■□□□ 1.35
HACE1-204ENST00000416605 MYT1LQ9UL68 1186 aa23.47■■□□□ 1.35
HACE1-204ENST00000416605 ZNF326Q5BKZ1 582 aaKnown RBP23.47■■□□□ 1.35
HACE1-204ENST00000416605 EEA1Q15075 1411 aa23.46■■□□□ 1.35
HACE1-204ENST00000416605 TNIKQ9UKE5 1360 aa23.43■■□□□ 1.34
HACE1-204ENST00000416605 GOLGA3Q08378 1498 aa23.4■■□□□ 1.34
HACE1-204ENST00000416605 SUPT16HQ9Y5B9 1047 aaKnown RBP23.38■■□□□ 1.33
HACE1-204ENST00000416605 RB1CC1Q8TDY2 1594 aa23.33■■□□□ 1.32
HACE1-204ENST00000416605 FAM9BQ8IZU0 186 aa23.33■■□□□ 1.32
HACE1-204ENST00000416605 NPM2Q86SE8 214 aaKnown RBP23.32■■□□□ 1.32
HACE1-204ENST00000416605 HIRIP3Q9BW71 556 aaPredicted RBP23.28■■□□□ 1.32
HACE1-204ENST00000416605 IRX6P78412 446 aaPredicted RBP23.27■■□□□ 1.32
HACE1-204ENST00000416605 NBR1Q14596 966 aa23.24■■□□□ 1.31
HACE1-204ENST00000416605 CCDC136Q96JN2 1154 aa23.21■■□□□ 1.31
HACE1-204ENST00000416605 ZBTB47Q9UFB7 747 aaPredicted RBP23.18■■□□□ 1.3
HACE1-204ENST00000416605 SLC4A1APQ9BWU0 796 aaKnown RBP23.18■■□□□ 1.3
HACE1-204ENST00000416605 MRS2Q9HD23 443 aa23.17■■□□□ 1.3
HACE1-204ENST00000416605 CEP164Q9UPV0 1460 aa23.15■■□□□ 1.3
HACE1-204ENST00000416605 WRNQ14191 1432 aaPredicted RBP eCLIP23.13■■□□□ 1.29
HACE1-204ENST00000416605 ARID3CA6NKF2 412 aa23.09■■□□□ 1.29
HACE1-204ENST00000416605 EIF5BO60841 1220 aaKnown RBP23.06■■□□□ 1.28
HACE1-204ENST00000416605 SOGA1O94964 1423 aa23.04■■□□□ 1.28
HACE1-204ENST00000416605 CECR2Q9BXF3 1484 aa23.03■■□□□ 1.28
HACE1-204ENST00000416605 TMC1Q8TDI8 760 aa23.03■■□□□ 1.28
HACE1-204ENST00000416605 EIF4G2P78344 907 aaKnown RBP eCLIP23.02■■□□□ 1.28
HACE1-204ENST00000416605 CANXP27824 592 aaKnown RBP23.01■■□□□ 1.27
HACE1-204ENST00000416605 CHIC2Q9UKJ5 165 aa23.01■■□□□ 1.27
HACE1-204ENST00000416605 BCL11AQ9H165 835 aa23■■□□□ 1.27
HACE1-204ENST00000416605 SALL2Q9Y467 1007 aaPredicted RBP22.96■■□□□ 1.27
HACE1-204ENST00000416605 SIN3AQ96ST3 1273 aa22.96■■□□□ 1.27
HACE1-204ENST00000416605 TSHZ2Q9NRE2 1034 aa22.96■■□□□ 1.27
HACE1-204ENST00000416605 MTUS2Q5JR59 1369 aa22.95■■□□□ 1.26
HACE1-204ENST00000416605 RBM19Q9Y4C8 960 aaKnown RBP22.95■■□□□ 1.26
HACE1-204ENST00000416605 ZNF777Q9ULD5 760 aaPredicted RBP22.93■■□□□ 1.26
HACE1-204ENST00000416605 PPP4R2Q9NY27 417 aa22.91■■□□□ 1.26
HACE1-204ENST00000416605 VPS8Q8N3P4 1428 aa22.9■■□□□ 1.26
HACE1-204ENST00000416605 CCNB3Q8WWL7 1395 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms