RNA–Protein interactions for RNA: ENST00000415905.5

PPP6C-202, Transcript of protein phosphatase 6 catalytic subunit, humanhuman

TSL 2 BASIC

Gene PPP6C, Length 4,172 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6C-202ENST00000415905 NISCHQ9Y2I1 1504 aa22.76■■□□□ 1.23
PPP6C-202ENST00000415905 DCAF8L2P0C7V8 631 aa22.23■■□□□ 1.15
PPP6C-202ENST00000415905 SUPT5HO00267 1087 aaKnown RBP21.53■■□□□ 1.04
PPP6C-202ENST00000415905 SHROOM4Q9ULL8 1493 aa21.45■■□□□ 1.02
PPP6C-202ENST00000415905 EHMT2Q96KQ7 1210 aa20.57■□□□□ 0.88
PPP6C-202ENST00000415905 FAM9AQ8IZU1 332 aaPredicted RBP20.2■□□□□ 0.82
PPP6C-202ENST00000415905 PCGF6Q9BYE7 350 aa20.2■□□□□ 0.82
PPP6C-202ENST00000415905 TTBK1Q5TCY1 1321 aaPredicted RBP19.84■□□□□ 0.77
PPP6C-202ENST00000415905 TRIM41Q8WV44 630 aa19.81■□□□□ 0.76
PPP6C-202ENST00000415905 CHIC1Q5VXU3 224 aa19.74■□□□□ 0.75
PPP6C-202ENST00000415905 LOC105371045A0A1W2PR82 267 aa19.68■□□□□ 0.74
PPP6C-202ENST00000415905 PPARGC1BQ86YN6 1023 aaKnown RBP19.55■□□□□ 0.72
PPP6C-202ENST00000415905 RANGAP1P46060 587 aaPredicted RBP19.51■□□□□ 0.71
PPP6C-202ENST00000415905 APLP2Q06481 763 aa19.43■□□□□ 0.7
PPP6C-202ENST00000415905 HRCP23327 699 aa19.4■□□□□ 0.7
PPP6C-202ENST00000415905 ABCC9O60706 1549 aa19.36■□□□□ 0.69
PPP6C-202ENST00000415905 CCER1Q8TC90 406 aaPredicted RBP19.34■□□□□ 0.69
PPP6C-202ENST00000415905 UBTFP17480 764 aaKnown RBP19.33■□□□□ 0.68
PPP6C-202ENST00000415905 TRIM26Q12899 539 aaPredicted RBP19.3■□□□□ 0.68
PPP6C-202ENST00000415905 ZEB1P37275 1124 aaPredicted RBP19.23■□□□□ 0.67
PPP6C-202ENST00000415905 PABPN1Q86U42 306 aaKnown RBP eCLIP19.13■□□□□ 0.65
PPP6C-202ENST00000415905 ATP1B4Q9UN42 357 aaPredicted RBP18.98■□□□□ 0.63
PPP6C-202ENST00000415905 ZCCHC6Q5VYS8 1495 aaKnown RBP18.97■□□□□ 0.63
PPP6C-202ENST00000415905 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.89■□□□□ 0.61
PPP6C-202ENST00000415905 YTHDC1Q96MU7 727 aaKnown RBP18.89■□□□□ 0.61
PPP6C-202ENST00000415905 CENPBP07199 599 aaPredicted RBP18.88■□□□□ 0.61
PPP6C-202ENST00000415905 HNRNPUL2Q1KMD3 747 aaKnown RBP18.82■□□□□ 0.6
PPP6C-202ENST00000415905 ITGAEP38570 1179 aa18.73■□□□□ 0.59
PPP6C-202ENST00000415905 MYO15BQ96JP2 1530 aa18.68■□□□□ 0.58
PPP6C-202ENST00000415905 PELP1Q8IZL8 1130 aaKnown RBP18.67■□□□□ 0.58
PPP6C-202ENST00000415905 SCRIBQ14160 1630 aa18.64■□□□□ 0.57
PPP6C-202ENST00000415905 CCDC180Q9P1Z9 1646 aa18.59■□□□□ 0.57
PPP6C-202ENST00000415905 DIEXFQ68CQ4 756 aaKnown RBP18.5■□□□□ 0.55
PPP6C-202ENST00000415905 CSRNP3Q8WYN3 585 aa18.4■□□□□ 0.54
PPP6C-202ENST00000415905 DCAF1Q9Y4B6 1507 aa18.37■□□□□ 0.53
PPP6C-202ENST00000415905 RSF1Q96T23 1441 aaPredicted RBP18.33■□□□□ 0.53
PPP6C-202ENST00000415905 FAM50AQ14320 339 aaKnown RBP18.22■□□□□ 0.51
PPP6C-202ENST00000415905 NEFLP07196 543 aa18.19■□□□□ 0.5
PPP6C-202ENST00000415905 GTF3C3Q9Y5Q9 886 aa18.18■□□□□ 0.5
PPP6C-202ENST00000415905 CNGB1Q14028 1251 aaPredicted RBP18.16■□□□□ 0.5
PPP6C-202ENST00000415905 NEUROD1Q13562 356 aa18.14■□□□□ 0.49
PPP6C-202ENST00000415905 P3H3Q8IVL6 736 aa18.14■□□□□ 0.49
PPP6C-202ENST00000415905 ZNF316A6NFI3 1004 aaPredicted RBP18.13■□□□□ 0.49
PPP6C-202ENST00000415905 POLR3GLQ9BT43 218 aa18.1■□□□□ 0.49
PPP6C-202ENST00000415905 CECR2Q9BXF3 1484 aa18.07■□□□□ 0.48
PPP6C-202ENST00000415905 ACIN1Q9UKV3 1341 aaKnown RBP18.01■□□□□ 0.47
PPP6C-202ENST00000415905 RB1CC1Q8TDY2 1594 aa18■□□□□ 0.47
PPP6C-202ENST00000415905 ERICH6Q7L0X2 663 aa17.99■□□□□ 0.47
PPP6C-202ENST00000415905 ARID3CA6NKF2 412 aa17.97■□□□□ 0.47
PPP6C-202ENST00000415905 FBLN2P98095 1184 aa17.96■□□□□ 0.47
PPP6C-202ENST00000415905 NACADO15069 1562 aa17.95■□□□□ 0.46
PPP6C-202ENST00000415905 TRIM52Q96A61 297 aa17.92■□□□□ 0.46
PPP6C-202ENST00000415905 BCANQ96GW7 911 aa17.89■□□□□ 0.45
PPP6C-202ENST00000415905 MYT1LQ9UL68 1186 aa17.87■□□□□ 0.45
PPP6C-202ENST00000415905 CEP162Q5TB80 1403 aa17.86■□□□□ 0.45
PPP6C-202ENST00000415905 SCAF1Q9H7N4 1312 aaKnown RBP17.84■□□□□ 0.45
PPP6C-202ENST00000415905 CLIP1P30622 1438 aa17.8■□□□□ 0.44
PPP6C-202ENST00000415905 MROH2BQ7Z745 1585 aa17.8■□□□□ 0.44
PPP6C-202ENST00000415905 MIER1Q8N108 512 aa17.76■□□□□ 0.43
PPP6C-202ENST00000415905 SOGA1O94964 1423 aa17.75■□□□□ 0.43
PPP6C-202ENST00000415905 WRNQ14191 1432 aaPredicted RBP eCLIP17.75■□□□□ 0.43
PPP6C-202ENST00000415905 ZNF326Q5BKZ1 582 aaKnown RBP17.74■□□□□ 0.43
PPP6C-202ENST00000415905 ANP32CO43423 234 aa17.71■□□□□ 0.43
PPP6C-202ENST00000415905 TNIKQ9UKE5 1360 aa17.68■□□□□ 0.42
PPP6C-202ENST00000415905 DDX10Q13206 875 aaKnown RBP17.68■□□□□ 0.42
PPP6C-202ENST00000415905 BAZ1AQ9NRL2 1556 aaPredicted RBP17.67■□□□□ 0.42
PPP6C-202ENST00000415905 GOLGA3Q08378 1498 aa17.67■□□□□ 0.42
PPP6C-202ENST00000415905 BAZ1BQ9UIG0 1483 aaKnown RBP17.66■□□□□ 0.42
PPP6C-202ENST00000415905 HIRIP3Q9BW71 556 aaPredicted RBP17.65■□□□□ 0.42
PPP6C-202ENST00000415905 ABCC8Q09428 1581 aa17.63■□□□□ 0.41
PPP6C-202ENST00000415905 EEA1Q15075 1411 aa17.63■□□□□ 0.41
PPP6C-202ENST00000415905 CCDC88BA6NC98 1476 aa17.62■□□□□ 0.41
PPP6C-202ENST00000415905 MYT1Q01538 1121 aa17.6■□□□□ 0.41
PPP6C-202ENST00000415905 CHIC2Q9UKJ5 165 aa17.59■□□□□ 0.41
PPP6C-202ENST00000415905 ZNF777Q9ULD5 760 aaPredicted RBP17.58■□□□□ 0.4
PPP6C-202ENST00000415905 WIZO95785 1651 aa17.55■□□□□ 0.4
PPP6C-202ENST00000415905 CEP164Q9UPV0 1460 aa17.51■□□□□ 0.39
PPP6C-202ENST00000415905 TONSLQ96HA7 1378 aa17.51■□□□□ 0.39
PPP6C-202ENST00000415905 FKBP8Q14318 412 aa17.48■□□□□ 0.39
PPP6C-202ENST00000415905 SLC4A1APQ9BWU0 796 aaKnown RBP17.44■□□□□ 0.38
PPP6C-202ENST00000415905 MTUS2Q5JR59 1369 aa17.42■□□□□ 0.38
PPP6C-202ENST00000415905 KIF27Q86VH2 1401 aa17.41■□□□□ 0.38
PPP6C-202ENST00000415905 KANK4Q5T7N3 995 aaPredicted RBP17.41■□□□□ 0.38
PPP6C-202ENST00000415905 RRP7BPQ9NSQ0 103 aa17.4■□□□□ 0.38
PPP6C-202ENST00000415905 HNRNPUQ00839 825 aaKnown RBP eCLIP17.4■□□□□ 0.38
PPP6C-202ENST00000415905 SIN3AQ96ST3 1273 aa17.4■□□□□ 0.38
PPP6C-202ENST00000415905 RUSC2Q8N2Y8 1516 aa17.38■□□□□ 0.37
PPP6C-202ENST00000415905 FAM9BQ8IZU0 186 aa17.36■□□□□ 0.37
PPP6C-202ENST00000415905 CDK11AQ9UQ88 783 aaPredicted RBP17.36■□□□□ 0.37
PPP6C-202ENST00000415905 CHMP7Q8WUX9 453 aaPredicted RBP17.33■□□□□ 0.37
PPP6C-202ENST00000415905 VPS8Q8N3P4 1428 aa17.3■□□□□ 0.36
PPP6C-202ENST00000415905 DAXXQ9UER7 740 aaPredicted RBP17.29■□□□□ 0.36
PPP6C-202ENST00000415905 IRX6P78412 446 aaPredicted RBP17.28■□□□□ 0.36
PPP6C-202ENST00000415905 TOP2AP11388 1531 aaKnown RBP17.28■□□□□ 0.36
PPP6C-202ENST00000415905 CCNB3Q8WWL7 1395 aa17.26■□□□□ 0.35
PPP6C-202ENST00000415905 SALL2Q9Y467 1007 aaPredicted RBP17.25■□□□□ 0.35
PPP6C-202ENST00000415905 CUX2O14529 1486 aa17.24■□□□□ 0.35
PPP6C-202ENST00000415905 SENP3-EIF4A1A0A087X0R7 540 aa17.24■□□□□ 0.35
PPP6C-202ENST00000415905 CARMIL1Q5VZK9 1371 aa17.23■□□□□ 0.35
PPP6C-202ENST00000415905 KDM2AQ9Y2K7 1162 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms