RNA–Protein interactions for RNA: ENST00000415249.1

AC000058.1-201, humanhuman

TSL 4 BASIC

Gene AC000058.1, Length 536 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC000058.1-201ENST00000415249 AEBP2Q6ZN18 517 aaPredicted RBP25.81■■□□□ 1.72
AC000058.1-201ENST00000415249 CHIC1Q5VXU3 224 aa24.38■■□□□ 1.49
AC000058.1-201ENST00000415249 SENP3Q9H4L4 574 aaPredicted RBP21.95■■□□□ 1.1
AC000058.1-201ENST00000415249 PHF23Q9BUL5 403 aaPredicted RBP21.68■■□□□ 1.06
AC000058.1-201ENST00000415249 FOXD1Q16676 465 aa20.52■□□□□ 0.88
AC000058.1-201ENST00000415249 PLPPR3Q6T4P5 718 aa19.4■□□□□ 0.7
AC000058.1-201ENST00000415249 MSH5O43196 834 aa19.17■□□□□ 0.66
AC000058.1-201ENST00000415249 PPP6R1Q9UPN7 881 aa19.15■□□□□ 0.66
AC000058.1-201ENST00000415249 PIAS4Q8N2W9 510 aaPredicted RBP19.1■□□□□ 0.65
AC000058.1-201ENST00000415249 ADRA2BP18089 450 aa19.05■□□□□ 0.64
AC000058.1-201ENST00000415249 POTEDQ86YR6 584 aa18.91■□□□□ 0.62
AC000058.1-201ENST00000415249 MAPK8IP2Q13387 824 aaPredicted RBP17.54■□□□□ 0.4
AC000058.1-201ENST00000415249 DMRT2Q9Y5R5 561 aa17.42■□□□□ 0.38
AC000058.1-201ENST00000415249 SCAF1Q9H7N4 1312 aaKnown RBP17.35■□□□□ 0.37
AC000058.1-201ENST00000415249 PPP4R3CPQ6ZMV5 832 aa17.02■□□□□ 0.32
AC000058.1-201ENST00000415249 HOXD11P31277 338 aaPredicted RBP16.76■□□□□ 0.27
AC000058.1-201ENST00000415249 CNKSR2Q8WXI2 1034 aa16.71■□□□□ 0.27
AC000058.1-201ENST00000415249 DCAF8L1A6NGE4 600 aa16.62■□□□□ 0.25
AC000058.1-201ENST00000415249 RNF216Q9NWF9 866 aaPredicted RBP16.59■□□□□ 0.25
AC000058.1-201ENST00000415249 CACNB1Q02641 598 aaPredicted RBP16.49■□□□□ 0.23
AC000058.1-201ENST00000415249 RNF39Q9H2S5 420 aa16.4■□□□□ 0.22
AC000058.1-201ENST00000415249 NCBP3Q53F19 620 aaKnown RBP16.28■□□□□ 0.2
AC000058.1-201ENST00000415249 DNAJC5BQ9UF47 199 aa16.2■□□□□ 0.18
AC000058.1-201ENST00000415249 C1QBPQ07021 282 aaKnown RBP16.12■□□□□ 0.17
AC000058.1-201ENST00000415249 NPM3O75607 178 aaKnown RBP16.11■□□□□ 0.17
AC000058.1-201ENST00000415249 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.89■□□□□ 0.13
AC000058.1-201ENST00000415249 KCNA4P22459 653 aa15.74■□□□□ 0.11
AC000058.1-201ENST00000415249 U3KPZ7 1027 aaPredicted RBP15.62■□□□□ 0.09
AC000058.1-201ENST00000415249 SLC4A2P04920 1241 aa15.45■□□□□ 0.06
AC000058.1-201ENST00000415249 SPINK5Q9NQ38 1064 aaPredicted RBP15.41■□□□□ 0.06
AC000058.1-201ENST00000415249 DSG3P32926 999 aa15.33■□□□□ 0.04
AC000058.1-201ENST00000415249 CAPN15O75808 1086 aa15.32■□□□□ 0.04
AC000058.1-201ENST00000415249 TRHP20396 242 aaPredicted RBP15.07■□□□□ 0
AC000058.1-201ENST00000415249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.06■□□□□ 0
AC000058.1-201ENST00000415249 APLP2Q06481 763 aa15.06■□□□□ 0
AC000058.1-201ENST00000415249 HNRNPUL2Q1KMD3 747 aaKnown RBP15.06■□□□□ 0
AC000058.1-201ENST00000415249 ZNF219Q9P2Y4 722 aaPredicted RBP15.03■□□□□ -0
AC000058.1-201ENST00000415249 ABCB7O75027 752 aa14.99□□□□□ -0.01
AC000058.1-201ENST00000415249 SAMD1Q6SPF0 538 aaPredicted RBP14.99□□□□□ -0.01
AC000058.1-201ENST00000415249 MYCNP04198 464 aaPredicted RBP14.87□□□□□ -0.03
AC000058.1-201ENST00000415249 SLC4A1APQ9BWU0 796 aaKnown RBP14.79□□□□□ -0.04
AC000058.1-201ENST00000415249 NISCHQ9Y2I1 1504 aa14.78□□□□□ -0.04
AC000058.1-201ENST00000415249 POTEHQ6S545 545 aa14.78□□□□□ -0.04
AC000058.1-201ENST00000415249 POLA2Q14181 598 aa14.68□□□□□ -0.06
AC000058.1-201ENST00000415249 FOXD4L1Q9NU39 408 aa14.67□□□□□ -0.06
AC000058.1-201ENST00000415249 ATF5Q9Y2D1 282 aaPredicted RBP14.6□□□□□ -0.07
AC000058.1-201ENST00000415249 RBM42Q9BTD8 480 aaKnown RBP14.55□□□□□ -0.08
AC000058.1-201ENST00000415249 ZBTB22O15209 634 aa14.5□□□□□ -0.09
AC000058.1-201ENST00000415249 ZBTB12Q9Y330 459 aaPredicted RBP14.32□□□□□ -0.12
AC000058.1-201ENST00000415249 CHRDL2Q6WN34 429 aa14.31□□□□□ -0.12
AC000058.1-201ENST00000415249 ATXN8OSP0DMR3 200 aa14.24□□□□□ -0.13
AC000058.1-201ENST00000415249 AKT1S1Q96B36 256 aa14.24□□□□□ -0.13
AC000058.1-201ENST00000415249 OSCARQ8IYS5 282 aa14.19□□□□□ -0.14
AC000058.1-201ENST00000415249 REM2Q8IYK8 340 aaPredicted RBP14.12□□□□□ -0.15
AC000058.1-201ENST00000415249 PITPNM1O00562 1244 aa13.97□□□□□ -0.17
AC000058.1-201ENST00000415249 PIP4P2Q8N4L2 257 aa13.97□□□□□ -0.17
AC000058.1-201ENST00000415249 FBLN2P98095 1184 aa13.93□□□□□ -0.18
AC000058.1-201ENST00000415249 MKRN4PQ13434 485 aaPredicted RBP13.92□□□□□ -0.18
AC000058.1-201ENST00000415249 SPDYE2BA6NHP3 402 aa13.91□□□□□ -0.18
AC000058.1-201ENST00000415249 SPDYE6P0CI01 402 aa13.91□□□□□ -0.18
AC000058.1-201ENST00000415249 SPDYE2Q495Y8 402 aa13.91□□□□□ -0.18
AC000058.1-201ENST00000415249 FXR2P51116 673 aaKnown RBP eCLIP13.89□□□□□ -0.19
AC000058.1-201ENST00000415249 SP7Q8TDD2 431 aaPredicted RBP13.81□□□□□ -0.2
AC000058.1-201ENST00000415249 SSUH2Q9Y2M2 353 aa13.75□□□□□ -0.21
AC000058.1-201ENST00000415249 CSRNP3Q8WYN3 585 aa13.74□□□□□ -0.21
AC000058.1-201ENST00000415249 ZNF692Q9BU19 519 aaPredicted RBP13.71□□□□□ -0.21
AC000058.1-201ENST00000415249 HAX1O00165 279 aa13.69□□□□□ -0.22
AC000058.1-201ENST00000415249 SPDYE1Q8NFV5 336 aaPredicted RBP13.67□□□□□ -0.22
AC000058.1-201ENST00000415249 CLEC11AQ9Y240 323 aa13.64□□□□□ -0.23
AC000058.1-201ENST00000415249 EHMT2Q96KQ7 1210 aa13.63□□□□□ -0.23
AC000058.1-201ENST00000415249 EVX2Q03828 476 aa13.61□□□□□ -0.23
AC000058.1-201ENST00000415249 PRKAR2AP13861 404 aaKnown RBP13.59□□□□□ -0.23
AC000058.1-201ENST00000415249 PABPN1Q86U42 306 aaKnown RBP eCLIP13.52□□□□□ -0.25
AC000058.1-201ENST00000415249 C19orf67A6NJJ6 358 aa13.44□□□□□ -0.26
AC000058.1-201ENST00000415249 CHADLQ6NUI6 762 aa13.43□□□□□ -0.26
AC000058.1-201ENST00000415249 PRR29P0C7W0 189 aa13.41□□□□□ -0.26
AC000058.1-201ENST00000415249 GABBR2O75899 941 aa13.26□□□□□ -0.29
AC000058.1-201ENST00000415249 FARP1Q9Y4F1 1045 aaPredicted RBP13.23□□□□□ -0.29
AC000058.1-201ENST00000415249 SPDYE4A6NLX3 237 aa13.16□□□□□ -0.3
AC000058.1-201ENST00000415249 CD44P16070 742 aaKnown RBP13.14□□□□□ -0.31
AC000058.1-201ENST00000415249 CREBZFQ9NS37 354 aa13.12□□□□□ -0.31
AC000058.1-201ENST00000415249 STAG3Q9UJ98 1225 aa13.11□□□□□ -0.31
AC000058.1-201ENST00000415249 POTEIP0CG38 1075 aa13.02□□□□□ -0.33
AC000058.1-201ENST00000415249 CCDC180Q9P1Z9 1646 aa13.01□□□□□ -0.33
AC000058.1-201ENST00000415249 CLCN6P51797 869 aa12.98□□□□□ -0.33
AC000058.1-201ENST00000415249 ZNF579Q8NAF0 562 aaKnown RBP12.96□□□□□ -0.33
AC000058.1-201ENST00000415249 LHX8Q68G74 356 aa12.95□□□□□ -0.34
AC000058.1-201ENST00000415249 ZRANB1Q9UGI0 708 aa12.94□□□□□ -0.34
AC000058.1-201ENST00000415249 MNX1P50219 401 aaPredicted RBP12.91□□□□□ -0.34
AC000058.1-201ENST00000415249 PROM2Q8N271 834 aa12.9□□□□□ -0.34
AC000058.1-201ENST00000415249 GALR2O43603 387 aaPredicted RBP12.82□□□□□ -0.36
AC000058.1-201ENST00000415249 DCBLD2Q96PD2 775 aa12.82□□□□□ -0.36
AC000058.1-201ENST00000415249 NPM1P06748 294 aaKnown RBP eCLIP12.8□□□□□ -0.36
AC000058.1-201ENST00000415249 PHF12Q96QT6 1004 aa12.78□□□□□ -0.36
AC000058.1-201ENST00000415249 ABCC9O60706 1549 aa12.78□□□□□ -0.36
AC000058.1-201ENST00000415249 PAK3O75914 559 aaPredicted RBP12.76□□□□□ -0.37
AC000058.1-201ENST00000415249 PELP1Q8IZL8 1130 aaKnown RBP12.62□□□□□ -0.39
AC000058.1-201ENST00000415249 POTEB2H3BUK9 544 aa12.6□□□□□ -0.39
AC000058.1-201ENST00000415249 MS4A3Q96HJ5 214 aa12.6□□□□□ -0.39
AC000058.1-201ENST00000415249 TSPYL2Q9H2G4 693 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms