RNA–Protein interactions for RNA: ENST00000414743.6

LINC00446-201, long intergenic non-protein coding RNA 446, humanhuman

TSL 5 BASIC

Gene LINC00446, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00446-201ENST00000414743 CHIC1Q5VXU3 224 aa27.39■■□□□ 1.98
LINC00446-201ENST00000414743 AEBP2Q6ZN18 517 aaPredicted RBP27.38■■□□□ 1.97
LINC00446-201ENST00000414743 PHF23Q9BUL5 403 aaPredicted RBP24.17■■□□□ 1.46
LINC00446-201ENST00000414743 SENP3Q9H4L4 574 aaPredicted RBP23.1■■□□□ 1.29
LINC00446-201ENST00000414743 PLPPR3Q6T4P5 718 aa22.54■■□□□ 1.2
LINC00446-201ENST00000414743 FOXD1Q16676 465 aa21.38■■□□□ 1.01
LINC00446-201ENST00000414743 ADRA2BP18089 450 aa21.15■□□□□ 0.98
LINC00446-201ENST00000414743 PPP6R1Q9UPN7 881 aa21.11■□□□□ 0.97
LINC00446-201ENST00000414743 PIAS4Q8N2W9 510 aaPredicted RBP20.34■□□□□ 0.85
LINC00446-201ENST00000414743 KCNA4P22459 653 aa20.29■□□□□ 0.84
LINC00446-201ENST00000414743 POTEDQ86YR6 584 aa20.14■□□□□ 0.81
LINC00446-201ENST00000414743 PPP4R3CPQ6ZMV5 832 aa19.97■□□□□ 0.79
LINC00446-201ENST00000414743 EHMT2Q96KQ7 1210 aa19.72■□□□□ 0.75
LINC00446-201ENST00000414743 NCBP3Q53F19 620 aaKnown RBP19.62■□□□□ 0.73
LINC00446-201ENST00000414743 MSH5O43196 834 aa19.51■□□□□ 0.71
LINC00446-201ENST00000414743 SLC4A1APQ9BWU0 796 aaKnown RBP19.44■□□□□ 0.7
LINC00446-201ENST00000414743 NPM3O75607 178 aaKnown RBP19.36■□□□□ 0.69
LINC00446-201ENST00000414743 SCAF1Q9H7N4 1312 aaKnown RBP19.3■□□□□ 0.68
LINC00446-201ENST00000414743 CNKSR2Q8WXI2 1034 aa19.24■□□□□ 0.67
LINC00446-201ENST00000414743 CSRNP3Q8WYN3 585 aa19.13■□□□□ 0.65
LINC00446-201ENST00000414743 MAPK8IP2Q13387 824 aaPredicted RBP18.99■□□□□ 0.63
LINC00446-201ENST00000414743 RNF216Q9NWF9 866 aaPredicted RBP18.69■□□□□ 0.58
LINC00446-201ENST00000414743 ZBTB22O15209 634 aa18.68■□□□□ 0.58
LINC00446-201ENST00000414743 DNAJC5BQ9UF47 199 aa18.61■□□□□ 0.57
LINC00446-201ENST00000414743 DMRT2Q9Y5R5 561 aa18.55■□□□□ 0.56
LINC00446-201ENST00000414743 FOXD4L1Q9NU39 408 aa18.46■□□□□ 0.55
LINC00446-201ENST00000414743 HOXD11P31277 338 aaPredicted RBP18.43■□□□□ 0.54
LINC00446-201ENST00000414743 SLC4A2P04920 1241 aa18.1■□□□□ 0.49
LINC00446-201ENST00000414743 MYCNP04198 464 aaPredicted RBP17.86■□□□□ 0.45
LINC00446-201ENST00000414743 DCAF8L1A6NGE4 600 aa17.77■□□□□ 0.44
LINC00446-201ENST00000414743 ATXN8OSP0DMR3 200 aa17.72■□□□□ 0.43
LINC00446-201ENST00000414743 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.6■□□□□ 0.41
LINC00446-201ENST00000414743 U3KPZ7 1027 aaPredicted RBP17.39■□□□□ 0.37
LINC00446-201ENST00000414743 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.36■□□□□ 0.37
LINC00446-201ENST00000414743 HNRNPUL2Q1KMD3 747 aaKnown RBP17.36■□□□□ 0.37
LINC00446-201ENST00000414743 ATF5Q9Y2D1 282 aaPredicted RBP17.36■□□□□ 0.37
LINC00446-201ENST00000414743 SAMD1Q6SPF0 538 aaPredicted RBP17.34■□□□□ 0.37
LINC00446-201ENST00000414743 FKBP8Q14318 412 aa17.28■□□□□ 0.36
LINC00446-201ENST00000414743 CACNB1Q02641 598 aaPredicted RBP17.23■□□□□ 0.35
LINC00446-201ENST00000414743 APLP2Q06481 763 aa17.02■□□□□ 0.32
LINC00446-201ENST00000414743 ZNF219Q9P2Y4 722 aaPredicted RBP16.99■□□□□ 0.31
LINC00446-201ENST00000414743 RTN4Q9NQC3 1192 aaKnown RBP16.92■□□□□ 0.3
LINC00446-201ENST00000414743 AMER1Q5JTC6 1135 aaPredicted RBP16.91■□□□□ 0.3
LINC00446-201ENST00000414743 SPINK5Q9NQ38 1064 aaPredicted RBP16.72■□□□□ 0.27
LINC00446-201ENST00000414743 TRHP20396 242 aaPredicted RBP16.71■□□□□ 0.27
LINC00446-201ENST00000414743 RNF39Q9H2S5 420 aa16.71■□□□□ 0.27
LINC00446-201ENST00000414743 MKRN4PQ13434 485 aaPredicted RBP16.63■□□□□ 0.25
LINC00446-201ENST00000414743 CAPN15O75808 1086 aa16.62■□□□□ 0.25
LINC00446-201ENST00000414743 SPDYE4A6NLX3 237 aa16.59■□□□□ 0.25
LINC00446-201ENST00000414743 POLA2Q14181 598 aa16.57■□□□□ 0.24
LINC00446-201ENST00000414743 FBLN2P98095 1184 aa16.56■□□□□ 0.24
LINC00446-201ENST00000414743 C1QBPQ07021 282 aaKnown RBP16.54■□□□□ 0.24
LINC00446-201ENST00000414743 FBXO3Q9UK99 471 aa16.43■□□□□ 0.22
LINC00446-201ENST00000414743 SLC24A1O60721 1099 aa16.39■□□□□ 0.21
LINC00446-201ENST00000414743 ABCB7O75027 752 aa16.38■□□□□ 0.21
LINC00446-201ENST00000414743 PROM2Q8N271 834 aa16.37■□□□□ 0.21
LINC00446-201ENST00000414743 ZBTB12Q9Y330 459 aaPredicted RBP16.32■□□□□ 0.2
LINC00446-201ENST00000414743 VASPP50552 380 aaPredicted RBP16.21■□□□□ 0.19
LINC00446-201ENST00000414743 DSG3P32926 999 aa16.15■□□□□ 0.18
LINC00446-201ENST00000414743 IFNLR1Q8IU57 520 aaPredicted RBP16.04■□□□□ 0.16
LINC00446-201ENST00000414743 ZNF692Q9BU19 519 aaPredicted RBP16.01■□□□□ 0.15
LINC00446-201ENST00000414743 OSCARQ8IYS5 282 aa16■□□□□ 0.15
LINC00446-201ENST00000414743 SPDYE2BA6NHP3 402 aa15.94■□□□□ 0.14
LINC00446-201ENST00000414743 SPDYE6P0CI01 402 aa15.94■□□□□ 0.14
LINC00446-201ENST00000414743 SPDYE2Q495Y8 402 aa15.94■□□□□ 0.14
LINC00446-201ENST00000414743 SSUH2Q9Y2M2 353 aa15.89■□□□□ 0.13
LINC00446-201ENST00000414743 PABPN1Q86U42 306 aaKnown RBP eCLIP15.83■□□□□ 0.12
LINC00446-201ENST00000414743 STAG3Q9UJ98 1225 aa15.81■□□□□ 0.12
LINC00446-201ENST00000414743 KLHL34Q8N239 644 aa15.8■□□□□ 0.12
LINC00446-201ENST00000414743 PKD2Q13563 968 aa15.77■□□□□ 0.12
LINC00446-201ENST00000414743 DCAF8L2P0C7V8 631 aa15.75■□□□□ 0.11
LINC00446-201ENST00000414743 SPOCK2Q92563 424 aa15.73■□□□□ 0.11
LINC00446-201ENST00000414743 PLCD3Q8N3E9 789 aa15.72■□□□□ 0.11
LINC00446-201ENST00000414743 POTEHQ6S545 545 aa15.71■□□□□ 0.11
LINC00446-201ENST00000414743 MIER1Q8N108 512 aa15.65■□□□□ 0.1
LINC00446-201ENST00000414743 PLCB2Q00722 1185 aa15.62■□□□□ 0.09
LINC00446-201ENST00000414743 ECM2O94769 699 aaPredicted RBP15.56■□□□□ 0.08
LINC00446-201ENST00000414743 PLEKHG5O94827 1062 aa15.51■□□□□ 0.07
LINC00446-201ENST00000414743 ZBTB47Q9UFB7 747 aaPredicted RBP15.46■□□□□ 0.07
LINC00446-201ENST00000414743 HAP1P54257 671 aaPredicted RBP15.44■□□□□ 0.06
LINC00446-201ENST00000414743 CIZ1Q9ULV3 898 aaPredicted RBP15.4■□□□□ 0.06
LINC00446-201ENST00000414743 RGL2O15211 777 aa15.39■□□□□ 0.05
LINC00446-201ENST00000414743 RBM42Q9BTD8 480 aaKnown RBP15.36■□□□□ 0.05
LINC00446-201ENST00000414743 NPM1P06748 294 aaKnown RBP eCLIP15.33■□□□□ 0.04
LINC00446-201ENST00000414743 BBXQ8WY36 941 aaPredicted RBP15.33■□□□□ 0.04
LINC00446-201ENST00000414743 AKT1S1Q96B36 256 aa15.32■□□□□ 0.04
LINC00446-201ENST00000414743 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.32■□□□□ 0.04
LINC00446-201ENST00000414743 SPDYE1Q8NFV5 336 aaPredicted RBP15.31■□□□□ 0.04
LINC00446-201ENST00000414743 CLEC11AQ9Y240 323 aa15.26■□□□□ 0.03
LINC00446-201ENST00000414743 PAXIP1Q6ZW49 1069 aaPredicted RBP15.22■□□□□ 0.03
LINC00446-201ENST00000414743 TRIM41Q8WV44 630 aa15.22■□□□□ 0.03
LINC00446-201ENST00000414743 CFAP44Q96MT7 982 aa15.2■□□□□ 0.02
LINC00446-201ENST00000414743 PRR29P0C7W0 189 aa15.19■□□□□ 0.02
LINC00446-201ENST00000414743 GSE1Q14687 1217 aa15.18■□□□□ 0.02
LINC00446-201ENST00000414743 REM2Q8IYK8 340 aaPredicted RBP15.18■□□□□ 0.02
LINC00446-201ENST00000414743 CHGAP10645 457 aaKnown RBP15.17■□□□□ 0.02
LINC00446-201ENST00000414743 NUBP1P53384 320 aa15.17■□□□□ 0.02
LINC00446-201ENST00000414743 VSIG10Q8N0Z9 540 aa15.16■□□□□ 0.02
LINC00446-201ENST00000414743 CREBZFQ9NS37 354 aa15.15■□□□□ 0.02
LINC00446-201ENST00000414743 DCAF8Q5TAQ9 597 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms