RNA–Protein interactions for RNA: ENST00000413555.5

CCT3-207, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 5

Gene CCT3, Length 842 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-207ENST00000413555 AEBP2Q6ZN18 517 aaPredicted RBP20.89■□□□□ 0.93
CCT3-207ENST00000413555 CHIC1Q5VXU3 224 aa20.01■□□□□ 0.79
CCT3-207ENST00000413555 SENP3Q9H4L4 574 aaPredicted RBP17.82■□□□□ 0.44
CCT3-207ENST00000413555 PHF23Q9BUL5 403 aaPredicted RBP17.59■□□□□ 0.41
CCT3-207ENST00000413555 FOXD1Q16676 465 aa16.58■□□□□ 0.24
CCT3-207ENST00000413555 PLPPR3Q6T4P5 718 aa16.06■□□□□ 0.16
CCT3-207ENST00000413555 PPP6R1Q9UPN7 881 aa15.61■□□□□ 0.09
CCT3-207ENST00000413555 ADRA2BP18089 450 aa15.56■□□□□ 0.08
CCT3-207ENST00000413555 PIAS4Q8N2W9 510 aaPredicted RBP15.52■□□□□ 0.08
CCT3-207ENST00000413555 MSH5O43196 834 aa15.47■□□□□ 0.07
CCT3-207ENST00000413555 POTEDQ86YR6 584 aa14.82□□□□□ -0.04
CCT3-207ENST00000413555 SCAF1Q9H7N4 1312 aaKnown RBP14.26□□□□□ -0.13
CCT3-207ENST00000413555 MAPK8IP2Q13387 824 aaPredicted RBP14.23□□□□□ -0.13
CCT3-207ENST00000413555 DMRT2Q9Y5R5 561 aa14.16□□□□□ -0.14
CCT3-207ENST00000413555 PPP4R3CPQ6ZMV5 832 aa14.08□□□□□ -0.16
CCT3-207ENST00000413555 CNKSR2Q8WXI2 1034 aa13.8□□□□□ -0.2
CCT3-207ENST00000413555 HOXD11P31277 338 aaPredicted RBP13.71□□□□□ -0.21
CCT3-207ENST00000413555 NISCHQ9Y2I1 1504 aa13.64□□□□□ -0.23
CCT3-207ENST00000413555 RNF216Q9NWF9 866 aaPredicted RBP13.63□□□□□ -0.23
CCT3-207ENST00000413555 NCBP3Q53F19 620 aaKnown RBP13.59□□□□□ -0.23
CCT3-207ENST00000413555 DCAF8L1A6NGE4 600 aa13.51□□□□□ -0.25
CCT3-207ENST00000413555 NPM3O75607 178 aaKnown RBP13.39□□□□□ -0.27
CCT3-207ENST00000413555 KCNA4P22459 653 aa13.27□□□□□ -0.29
CCT3-207ENST00000413555 DNAJC5BQ9UF47 199 aa13.24□□□□□ -0.29
CCT3-207ENST00000413555 RNF39Q9H2S5 420 aa13.21□□□□□ -0.29
CCT3-207ENST00000413555 CACNB1Q02641 598 aaPredicted RBP13.14□□□□□ -0.31
CCT3-207ENST00000413555 C1QBPQ07021 282 aaKnown RBP13.03□□□□□ -0.32
CCT3-207ENST00000413555 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.02□□□□□ -0.331e-10■■□□□ 12.8
CCT3-207ENST00000413555 U3KPZ7 1027 aaPredicted RBP12.78□□□□□ -0.36
CCT3-207ENST00000413555 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
CCT3-207ENST00000413555 ABCC9O60706 1549 aa12.69□□□□□ -0.38
CCT3-207ENST00000413555 SLC4A1APQ9BWU0 796 aaKnown RBP12.56□□□□□ -0.4
CCT3-207ENST00000413555 SPINK5Q9NQ38 1064 aaPredicted RBP12.54□□□□□ -0.4
CCT3-207ENST00000413555 CAPN15O75808 1086 aa12.5□□□□□ -0.41
CCT3-207ENST00000413555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.49□□□□□ -0.41
CCT3-207ENST00000413555 HNRNPUL2Q1KMD3 747 aaKnown RBP12.49□□□□□ -0.41
CCT3-207ENST00000413555 APLP2Q06481 763 aa12.46□□□□□ -0.41
CCT3-207ENST00000413555 CCDC180Q9P1Z9 1646 aa12.45□□□□□ -0.42
CCT3-207ENST00000413555 DSG3P32926 999 aa12.42□□□□□ -0.42
CCT3-207ENST00000413555 SAMD1Q6SPF0 538 aaPredicted RBP12.42□□□□□ -0.42
CCT3-207ENST00000413555 MYCNP04198 464 aaPredicted RBP12.4□□□□□ -0.42
CCT3-207ENST00000413555 FOXD4L1Q9NU39 408 aa12.35□□□□□ -0.43
CCT3-207ENST00000413555 ZNF219Q9P2Y4 722 aaPredicted RBP12.35□□□□□ -0.43
CCT3-207ENST00000413555 TRHP20396 242 aaPredicted RBP12.33□□□□□ -0.44
CCT3-207ENST00000413555 ZBTB22O15209 634 aa12.21□□□□□ -0.45
CCT3-207ENST00000413555 ABCB7O75027 752 aa12.21□□□□□ -0.45
CCT3-207ENST00000413555 ATF5Q9Y2D1 282 aaPredicted RBP12.07□□□□□ -0.48
CCT3-207ENST00000413555 POLA2Q14181 598 aa12.05□□□□□ -0.48
CCT3-207ENST00000413555 RB1CC1Q8TDY2 1594 aa12.05□□□□□ -0.48
CCT3-207ENST00000413555 ATXN8OSP0DMR3 200 aa11.97□□□□□ -0.49
CCT3-207ENST00000413555 NACADO15069 1562 aa11.9□□□□□ -0.5
CCT3-207ENST00000413555 RBM42Q9BTD8 480 aaKnown RBP11.86□□□□□ -0.51
CCT3-207ENST00000413555 ZBTB12Q9Y330 459 aaPredicted RBP11.85□□□□□ -0.51
CCT3-207ENST00000413555 CSRNP3Q8WYN3 585 aa11.78□□□□□ -0.52
CCT3-207ENST00000413555 PABPN1Q86U42 306 aaKnown RBP eCLIP11.74□□□□□ -0.53
CCT3-207ENST00000413555 MYO15BQ96JP2 1530 aa11.68□□□□□ -0.54
CCT3-207ENST00000413555 EHMT2Q96KQ7 1210 aa11.67□□□□□ -0.54
CCT3-207ENST00000413555 DNAJC5Q9H3Z4 198 aa11.67□□□□□ -0.54
CCT3-207ENST00000413555 OSCARQ8IYS5 282 aa11.66□□□□□ -0.54
CCT3-207ENST00000413555 UNC13AQ9UPW8 1703 aa11.64□□□□□ -0.55
CCT3-207ENST00000413555 POTEHQ6S545 545 aa11.64□□□□□ -0.55
CCT3-207ENST00000413555 DCAF8L2P0C7V8 631 aa11.63□□□□□ -0.55
CCT3-207ENST00000413555 SHROOM4Q9ULL8 1493 aa11.63□□□□□ -0.55
CCT3-207ENST00000413555 AKT1S1Q96B36 256 aa11.61□□□□□ -0.55
CCT3-207ENST00000413555 FBLN2P98095 1184 aa11.6□□□□□ -0.55
CCT3-207ENST00000413555 BICRAQ9NZM4 1560 aa11.59□□□□□ -0.55
CCT3-207ENST00000413555 MKRN4PQ13434 485 aaPredicted RBP11.54□□□□□ -0.56
CCT3-207ENST00000413555 CECR2Q9BXF3 1484 aa11.54□□□□□ -0.56
CCT3-207ENST00000413555 CHRDL2Q6WN34 429 aa11.52□□□□□ -0.57
CCT3-207ENST00000413555 SPDYE2BA6NHP3 402 aa11.49□□□□□ -0.57
CCT3-207ENST00000413555 SPDYE6P0CI01 402 aa11.49□□□□□ -0.57
CCT3-207ENST00000413555 SPDYE2Q495Y8 402 aa11.49□□□□□ -0.57
CCT3-207ENST00000413555 REM2Q8IYK8 340 aaPredicted RBP11.49□□□□□ -0.57
CCT3-207ENST00000413555 CC2D2AQ9P2K1 1620 aa11.48□□□□□ -0.57
CCT3-207ENST00000413555 EIF4G1Q04637 1599 aaKnown RBP11.39□□□□□ -0.59
CCT3-207ENST00000413555 PITPNM1O00562 1244 aa11.37□□□□□ -0.59
CCT3-207ENST00000413555 SSUH2Q9Y2M2 353 aa11.36□□□□□ -0.59
CCT3-207ENST00000413555 ZNF692Q9BU19 519 aaPredicted RBP11.35□□□□□ -0.59
CCT3-207ENST00000413555 DCAF1Q9Y4B6 1507 aa11.35□□□□□ -0.59
CCT3-207ENST00000413555 PIP4P2Q8N4L2 257 aa11.28□□□□□ -0.6
CCT3-207ENST00000413555 FXR2P51116 673 aaKnown RBP eCLIP11.25□□□□□ -0.615e-6■■□□□ 11.5
CCT3-207ENST00000413555 SPDYE1Q8NFV5 336 aaPredicted RBP11.25□□□□□ -0.61
CCT3-207ENST00000413555 CUX2O14529 1486 aa11.25□□□□□ -0.61
CCT3-207ENST00000413555 ZCCHC6Q5VYS8 1495 aaKnown RBP11.2□□□□□ -0.62
CCT3-207ENST00000413555 SCRIBQ14160 1630 aa11.19□□□□□ -0.62
CCT3-207ENST00000413555 CLEC11AQ9Y240 323 aa11.18□□□□□ -0.62
CCT3-207ENST00000413555 SPDYE4A6NLX3 237 aa11.07□□□□□ -0.64
CCT3-207ENST00000413555 ERCC6Q03468 1493 aa11.06□□□□□ -0.64
CCT3-207ENST00000413555 PRKAR2AP13861 404 aaKnown RBP11.06□□□□□ -0.64
CCT3-207ENST00000413555 PRR29P0C7W0 189 aa11.04□□□□□ -0.64
CCT3-207ENST00000413555 HAX1O00165 279 aa11.01□□□□□ -0.65
CCT3-207ENST00000413555 SP7Q8TDD2 431 aaPredicted RBP10.99□□□□□ -0.65
CCT3-207ENST00000413555 NCAPD3P42695 1498 aa10.98□□□□□ -0.65
CCT3-207ENST00000413555 CHADLQ6NUI6 762 aa10.95□□□□□ -0.66
CCT3-207ENST00000413555 STAG3Q9UJ98 1225 aa10.94□□□□□ -0.66
CCT3-207ENST00000413555 EVX2Q03828 476 aa10.89□□□□□ -0.67
CCT3-207ENST00000413555 C19orf67A6NJJ6 358 aa10.88□□□□□ -0.67
CCT3-207ENST00000413555 PROM2Q8N271 834 aa10.87□□□□□ -0.67
CCT3-207ENST00000413555 TRIM41Q8WV44 630 aa10.87□□□□□ -0.67
CCT3-207ENST00000413555 HMGXB3Q12766 1538 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms