RNA–Protein interactions for RNA: ENST00000412043.6

KRIT1-205, Transcript of KRIT1, ankyrin repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRIT1, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRIT1-205ENST00000412043 NISCHQ9Y2I1 1504 aa25.36■■□□□ 1.65
KRIT1-205ENST00000412043 SHROOM4Q9ULL8 1493 aa21.65■■□□□ 1.06
KRIT1-205ENST00000412043 CCDC180Q9P1Z9 1646 aa21.53■■□□□ 1.04
KRIT1-205ENST00000412043 ZCCHC6Q5VYS8 1495 aaKnown RBP21.43■■□□□ 1.02
KRIT1-205ENST00000412043 SUPT5HO00267 1087 aaKnown RBP21.13■□□□□ 0.97
KRIT1-205ENST00000412043 DCAF8L2P0C7V8 631 aa21.09■□□□□ 0.97
KRIT1-205ENST00000412043 DCAF1Q9Y4B6 1507 aa20.72■□□□□ 0.91
KRIT1-205ENST00000412043 CHIC1Q5VXU3 224 aa20.5■□□□□ 0.87
KRIT1-205ENST00000412043 MYO15BQ96JP2 1530 aa20.49■□□□□ 0.87
KRIT1-205ENST00000412043 SCRIBQ14160 1630 aa20.28■□□□□ 0.84
KRIT1-205ENST00000412043 ABCC9O60706 1549 aa20.19■□□□□ 0.82
KRIT1-205ENST00000412043 RSF1Q96T23 1441 aaPredicted RBP20.06■□□□□ 0.8
KRIT1-205ENST00000412043 LOC105371045A0A1W2PR82 267 aa19.96■□□□□ 0.79
KRIT1-205ENST00000412043 NACADO15069 1562 aa19.92■□□□□ 0.78
KRIT1-205ENST00000412043 CECR2Q9BXF3 1484 aa19.88■□□□□ 0.77
KRIT1-205ENST00000412043 RB1CC1Q8TDY2 1594 aa19.87■□□□□ 0.77
KRIT1-205ENST00000412043 MROH2BQ7Z745 1585 aa19.77■□□□□ 0.76
KRIT1-205ENST00000412043 PCGF6Q9BYE7 350 aa19.75■□□□□ 0.75
KRIT1-205ENST00000412043 WIZO95785 1651 aa19.68■□□□□ 0.74
KRIT1-205ENST00000412043 HRCP23327 699 aa19.63■□□□□ 0.73
KRIT1-205ENST00000412043 TRIM41Q8WV44 630 aa19.61■□□□□ 0.73
KRIT1-205ENST00000412043 FAM9AQ8IZU1 332 aaPredicted RBP19.55■□□□□ 0.72
KRIT1-205ENST00000412043 UNC13AQ9UPW8 1703 aa19.49■□□□□ 0.71
KRIT1-205ENST00000412043 EHMT2Q96KQ7 1210 aa19.45■□□□□ 0.7
KRIT1-205ENST00000412043 BAZ1AQ9NRL2 1556 aaPredicted RBP19.45■□□□□ 0.7
KRIT1-205ENST00000412043 PPARGC1BQ86YN6 1023 aaKnown RBP19.4■□□□□ 0.7
KRIT1-205ENST00000412043 EIF4G1Q04637 1599 aaKnown RBP19.35■□□□□ 0.69
KRIT1-205ENST00000412043 SMARCA4P51532 1647 aa19.33■□□□□ 0.69
KRIT1-205ENST00000412043 TRIM26Q12899 539 aaPredicted RBP19.31■□□□□ 0.68
KRIT1-205ENST00000412043 PABPN1Q86U42 306 aaKnown RBP eCLIP19.29■□□□□ 0.68
KRIT1-205ENST00000412043 TOP2AP11388 1531 aaKnown RBP19.26■□□□□ 0.67
KRIT1-205ENST00000412043 CCDC88BA6NC98 1476 aa19.24■□□□□ 0.67
KRIT1-205ENST00000412043 BICRAQ9NZM4 1560 aa19.24■□□□□ 0.67
KRIT1-205ENST00000412043 SMARCA2P51531 1590 aa19.21■□□□□ 0.67
KRIT1-205ENST00000412043 ABCC8Q09428 1581 aa19.21■□□□□ 0.67
KRIT1-205ENST00000412043 SOGA1O94964 1423 aa19■□□□□ 0.63
KRIT1-205ENST00000412043 RUSC2Q8N2Y8 1516 aa18.97■□□□□ 0.63
KRIT1-205ENST00000412043 PEG3Q9GZU2 1588 aa18.94■□□□□ 0.62
KRIT1-205ENST00000412043 ATAD2BQ9ULI0 1458 aa18.87■□□□□ 0.61
KRIT1-205ENST00000412043 WRNQ14191 1432 aaPredicted RBP eCLIP18.79■□□□□ 0.6
KRIT1-205ENST00000412043 CSRNP3Q8WYN3 585 aa18.79■□□□□ 0.6
KRIT1-205ENST00000412043 CEP162Q5TB80 1403 aa18.79■□□□□ 0.6
KRIT1-205ENST00000412043 SYNJ1O43426 1573 aa18.79■□□□□ 0.6
KRIT1-205ENST00000412043 TTBK1Q5TCY1 1321 aaPredicted RBP18.77■□□□□ 0.6
KRIT1-205ENST00000412043 BAZ1BQ9UIG0 1483 aaKnown RBP18.77■□□□□ 0.6
KRIT1-205ENST00000412043 TNIKQ9UKE5 1360 aa18.73■□□□□ 0.59
KRIT1-205ENST00000412043 ZEB1P37275 1124 aaPredicted RBP18.71■□□□□ 0.59
KRIT1-205ENST00000412043 UBTFP17480 764 aaKnown RBP18.7■□□□□ 0.58
KRIT1-205ENST00000412043 EEA1Q15075 1411 aa18.68■□□□□ 0.58
KRIT1-205ENST00000412043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.67■□□□□ 0.58
KRIT1-205ENST00000412043 GOLGA3Q08378 1498 aa18.62■□□□□ 0.57
KRIT1-205ENST00000412043 KIF21BO75037 1637 aa18.52■□□□□ 0.56
KRIT1-205ENST00000412043 CEP164Q9UPV0 1460 aa18.52■□□□□ 0.56
KRIT1-205ENST00000412043 RAPGEF2Q9Y4G8 1499 aa18.52■□□□□ 0.55
KRIT1-205ENST00000412043 CCER1Q8TC90 406 aaPredicted RBP18.51■□□□□ 0.55
KRIT1-205ENST00000412043 TOP2BQ02880 1626 aa18.49■□□□□ 0.55
KRIT1-205ENST00000412043 NCAPD3P42695 1498 aa18.48■□□□□ 0.55
KRIT1-205ENST00000412043 RANGAP1P46060 587 aaPredicted RBP18.46■□□□□ 0.55
KRIT1-205ENST00000412043 HMGXB3Q12766 1538 aa18.44■□□□□ 0.54
KRIT1-205ENST00000412043 CLIP1P30622 1438 aa18.44■□□□□ 0.54
KRIT1-205ENST00000412043 BIVM-ERCC5R4GMW8 1640 aa18.43■□□□□ 0.54
KRIT1-205ENST00000412043 CUX1P39880 1505 aa18.39■□□□□ 0.54
KRIT1-205ENST00000412043 VPS8Q8N3P4 1428 aa18.34■□□□□ 0.53
KRIT1-205ENST00000412043 CFTRP13569 1480 aa18.33■□□□□ 0.52
KRIT1-205ENST00000412043 PRXQ9BXM0 1461 aa18.3■□□□□ 0.52
KRIT1-205ENST00000412043 HNRNPUL2Q1KMD3 747 aaKnown RBP18.28■□□□□ 0.52
KRIT1-205ENST00000412043 ERICH3Q5RHP9 1530 aa18.22■□□□□ 0.51
KRIT1-205ENST00000412043 ARAP1Q96P48 1450 aa18.22■□□□□ 0.51
KRIT1-205ENST00000412043 KIF27Q86VH2 1401 aa18.18■□□□□ 0.5
KRIT1-205ENST00000412043 KANK4Q5T7N3 995 aaPredicted RBP18.16■□□□□ 0.5
KRIT1-205ENST00000412043 PRDM2Q13029 1718 aa18.14■□□□□ 0.5
KRIT1-205ENST00000412043 APLP2Q06481 763 aa18.14■□□□□ 0.49
KRIT1-205ENST00000412043 CC2D2AQ9P2K1 1620 aa18.13■□□□□ 0.49
KRIT1-205ENST00000412043 CADPSQ9ULU8 1353 aa18.13■□□□□ 0.49
KRIT1-205ENST00000412043 DIEXFQ68CQ4 756 aaKnown RBP18.1■□□□□ 0.49
KRIT1-205ENST00000412043 SCAF1Q9H7N4 1312 aaKnown RBP18.09■□□□□ 0.49
KRIT1-205ENST00000412043 CUX2O14529 1486 aa18.09■□□□□ 0.49
KRIT1-205ENST00000412043 IGF1RP08069 1367 aa18.08■□□□□ 0.48
KRIT1-205ENST00000412043 ARHGAP35Q9NRY4 1499 aa18.07■□□□□ 0.48
KRIT1-205ENST00000412043 FGD5Q6ZNL6 1462 aa18.06■□□□□ 0.48
KRIT1-205ENST00000412043 NESP48681 1621 aa17.98■□□□□ 0.47
KRIT1-205ENST00000412043 ZNF316A6NFI3 1004 aaPredicted RBP17.98■□□□□ 0.47
KRIT1-205ENST00000412043 FANCD2Q9BXW9 1451 aa17.97■□□□□ 0.47
KRIT1-205ENST00000412043 CARMIL1Q5VZK9 1371 aa17.96■□□□□ 0.47
KRIT1-205ENST00000412043 NEUROD1Q13562 356 aa17.95■□□□□ 0.46
KRIT1-205ENST00000412043 RAD54L2Q9Y4B4 1467 aa17.94■□□□□ 0.46
KRIT1-205ENST00000412043 DNAJC5BQ9UF47 199 aa17.91■□□□□ 0.46
KRIT1-205ENST00000412043 RRBP1Q9P2E9 1410 aaKnown RBP17.9■□□□□ 0.46
KRIT1-205ENST00000412043 DHX57Q6P158 1386 aaKnown RBP17.9■□□□□ 0.46
KRIT1-205ENST00000412043 ACIN1Q9UKV3 1341 aaKnown RBP17.87■□□□□ 0.45
KRIT1-205ENST00000412043 P3H3Q8IVL6 736 aa17.87■□□□□ 0.45
KRIT1-205ENST00000412043 TOPBP1Q92547 1522 aa17.86■□□□□ 0.45
KRIT1-205ENST00000412043 POLA1P09884 1462 aaPredicted RBP17.86■□□□□ 0.45
KRIT1-205ENST00000412043 ITGAEP38570 1179 aa17.85■□□□□ 0.45
KRIT1-205ENST00000412043 DNMBPQ6XZF7 1577 aa17.84■□□□□ 0.45
KRIT1-205ENST00000412043 CCNB3Q8WWL7 1395 aa17.83■□□□□ 0.44
KRIT1-205ENST00000412043 TIAM1Q13009 1591 aa17.81■□□□□ 0.44
KRIT1-205ENST00000412043 MIER1Q8N108 512 aa17.8■□□□□ 0.44
KRIT1-205ENST00000412043 ABCA10Q8WWZ4 1543 aa17.8■□□□□ 0.44
KRIT1-205ENST00000412043 URB2Q14146 1524 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms