RNA–Protein interactions for RNA: ENST00000411884.2

CLHC1-205, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 549 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-205ENST00000411884 AEBP2Q6ZN18 517 aaPredicted RBP20.53■□□□□ 0.88
CLHC1-205ENST00000411884 CHIC1Q5VXU3 224 aa20.18■□□□□ 0.82
CLHC1-205ENST00000411884 PHF23Q9BUL5 403 aaPredicted RBP17.8■□□□□ 0.44
CLHC1-205ENST00000411884 SENP3Q9H4L4 574 aaPredicted RBP17.34■□□□□ 0.37
CLHC1-205ENST00000411884 PLPPR3Q6T4P5 718 aa16.43■□□□□ 0.22
CLHC1-205ENST00000411884 FOXD1Q16676 465 aa16.11■□□□□ 0.17
CLHC1-205ENST00000411884 PPP6R1Q9UPN7 881 aa15.66■□□□□ 0.1
CLHC1-205ENST00000411884 ADRA2BP18089 450 aa15.63■□□□□ 0.09
CLHC1-205ENST00000411884 PIAS4Q8N2W9 510 aaPredicted RBP15.2■□□□□ 0.02
CLHC1-205ENST00000411884 MSH5O43196 834 aa14.74□□□□□ -0.05
CLHC1-205ENST00000411884 PPP4R3CPQ6ZMV5 832 aa14.52□□□□□ -0.09
CLHC1-205ENST00000411884 KCNA4P22459 653 aa14.38□□□□□ -0.11
CLHC1-205ENST00000411884 SCAF1Q9H7N4 1312 aaKnown RBP14.23□□□□□ -0.13
CLHC1-205ENST00000411884 MAPK8IP2Q13387 824 aaPredicted RBP14.14□□□□□ -0.15
CLHC1-205ENST00000411884 NCBP3Q53F19 620 aaKnown RBP14.14□□□□□ -0.15
CLHC1-205ENST00000411884 CNKSR2Q8WXI2 1034 aa14.06□□□□□ -0.16
CLHC1-205ENST00000411884 NPM3O75607 178 aaKnown RBP13.99□□□□□ -0.17
CLHC1-205ENST00000411884 DMRT2Q9Y5R5 561 aa13.89□□□□□ -0.19
CLHC1-205ENST00000411884 POTEDQ86YR6 584 aa13.84□□□□□ -0.19
CLHC1-205ENST00000411884 RNF216Q9NWF9 866 aaPredicted RBP13.75□□□□□ -0.21
CLHC1-205ENST00000411884 SLC4A1APQ9BWU0 796 aaKnown RBP13.7□□□□□ -0.22
CLHC1-205ENST00000411884 HOXD11P31277 338 aaPredicted RBP13.67□□□□□ -0.22
CLHC1-205ENST00000411884 DNAJC5BQ9UF47 199 aa13.58□□□□□ -0.24
CLHC1-205ENST00000411884 EHMT2Q96KQ7 1210 aa13.49□□□□□ -0.25
CLHC1-205ENST00000411884 CSRNP3Q8WYN3 585 aa13.31□□□□□ -0.28
CLHC1-205ENST00000411884 ZBTB22O15209 634 aa13.26□□□□□ -0.29
CLHC1-205ENST00000411884 DCAF8L1A6NGE4 600 aa13.23□□□□□ -0.29
CLHC1-205ENST00000411884 SLC4A2P04920 1241 aa13.19□□□□□ -0.3
CLHC1-205ENST00000411884 FOXD4L1Q9NU39 408 aa13.16□□□□□ -0.3
CLHC1-205ENST00000411884 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.98□□□□□ -0.33
CLHC1-205ENST00000411884 MYCNP04198 464 aaPredicted RBP12.89□□□□□ -0.35
CLHC1-205ENST00000411884 U3KPZ7 1027 aaPredicted RBP12.84□□□□□ -0.35
CLHC1-205ENST00000411884 ATXN8OSP0DMR3 200 aa12.69□□□□□ -0.38
CLHC1-205ENST00000411884 RNF39Q9H2S5 420 aa12.68□□□□□ -0.38
CLHC1-205ENST00000411884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.67□□□□□ -0.38
CLHC1-205ENST00000411884 HNRNPUL2Q1KMD3 747 aaKnown RBP12.67□□□□□ -0.38
CLHC1-205ENST00000411884 SAMD1Q6SPF0 538 aaPredicted RBP12.65□□□□□ -0.38
CLHC1-205ENST00000411884 ATF5Q9Y2D1 282 aaPredicted RBP12.59□□□□□ -0.39
CLHC1-205ENST00000411884 C1QBPQ07021 282 aaKnown RBP12.52□□□□□ -0.41
CLHC1-205ENST00000411884 APLP2Q06481 763 aa12.48□□□□□ -0.41
CLHC1-205ENST00000411884 SPINK5Q9NQ38 1064 aaPredicted RBP12.43□□□□□ -0.42
CLHC1-205ENST00000411884 ZNF219Q9P2Y4 722 aaPredicted RBP12.34□□□□□ -0.43
CLHC1-205ENST00000411884 CAPN15O75808 1086 aa12.33□□□□□ -0.44
CLHC1-205ENST00000411884 TRHP20396 242 aaPredicted RBP12.31□□□□□ -0.44
CLHC1-205ENST00000411884 CACNB1Q02641 598 aaPredicted RBP12.19□□□□□ -0.46
CLHC1-205ENST00000411884 POLA2Q14181 598 aa12.17□□□□□ -0.46
CLHC1-205ENST00000411884 ABCB7O75027 752 aa12.13□□□□□ -0.47
CLHC1-205ENST00000411884 DSG3P32926 999 aa12.13□□□□□ -0.47
CLHC1-205ENST00000411884 MKRN4PQ13434 485 aaPredicted RBP12.05□□□□□ -0.48
CLHC1-205ENST00000411884 FKBP8Q14318 412 aa11.98□□□□□ -0.49
CLHC1-205ENST00000411884 FBLN2P98095 1184 aa11.97□□□□□ -0.49
CLHC1-205ENST00000411884 ZBTB12Q9Y330 459 aaPredicted RBP11.95□□□□□ -0.5
CLHC1-205ENST00000411884 SPDYE4A6NLX3 237 aa11.81□□□□□ -0.52
CLHC1-205ENST00000411884 OSCARQ8IYS5 282 aa11.76□□□□□ -0.53
CLHC1-205ENST00000411884 PROM2Q8N271 834 aa11.69□□□□□ -0.54
CLHC1-205ENST00000411884 SPDYE2BA6NHP3 402 aa11.66□□□□□ -0.54
CLHC1-205ENST00000411884 SPDYE6P0CI01 402 aa11.66□□□□□ -0.54
CLHC1-205ENST00000411884 SPDYE2Q495Y8 402 aa11.66□□□□□ -0.54
CLHC1-205ENST00000411884 ZNF692Q9BU19 519 aaPredicted RBP11.64□□□□□ -0.55
CLHC1-205ENST00000411884 SSUH2Q9Y2M2 353 aa11.62□□□□□ -0.55
CLHC1-205ENST00000411884 PABPN1Q86U42 306 aaKnown RBP eCLIP11.51□□□□□ -0.57
CLHC1-205ENST00000411884 RBM42Q9BTD8 480 aaKnown RBP11.5□□□□□ -0.57
CLHC1-205ENST00000411884 FBXO3Q9UK99 471 aa11.48□□□□□ -0.57
CLHC1-205ENST00000411884 AKT1S1Q96B36 256 aa11.42□□□□□ -0.58
CLHC1-205ENST00000411884 VASPP50552 380 aaPredicted RBP11.35□□□□□ -0.59
CLHC1-205ENST00000411884 REM2Q8IYK8 340 aaPredicted RBP11.33□□□□□ -0.6
CLHC1-205ENST00000411884 STAG3Q9UJ98 1225 aa11.32□□□□□ -0.6
CLHC1-205ENST00000411884 SPDYE1Q8NFV5 336 aaPredicted RBP11.27□□□□□ -0.61
CLHC1-205ENST00000411884 IFNLR1Q8IU57 520 aaPredicted RBP11.23□□□□□ -0.61
CLHC1-205ENST00000411884 RTN4Q9NQC3 1192 aaKnown RBP11.21□□□□□ -0.61
CLHC1-205ENST00000411884 PITPNM1O00562 1244 aa11.2□□□□□ -0.62
CLHC1-205ENST00000411884 CLEC11AQ9Y240 323 aa11.2□□□□□ -0.62
CLHC1-205ENST00000411884 AMER1Q5JTC6 1135 aaPredicted RBP11.19□□□□□ -0.62
CLHC1-205ENST00000411884 MIER1Q8N108 512 aa11.17□□□□□ -0.62
CLHC1-205ENST00000411884 PLCD3Q8N3E9 789 aa11.16□□□□□ -0.62
CLHC1-205ENST00000411884 PRR29P0C7W0 189 aa11.13□□□□□ -0.63
CLHC1-205ENST00000411884 KLHL34Q8N239 644 aa11.08□□□□□ -0.64
CLHC1-205ENST00000411884 CREBZFQ9NS37 354 aa11.07□□□□□ -0.64
CLHC1-205ENST00000411884 PLEKHG5O94827 1062 aa11.05□□□□□ -0.64
CLHC1-205ENST00000411884 SPOCK2Q92563 424 aa11.04□□□□□ -0.64
CLHC1-205ENST00000411884 ZBTB47Q9UFB7 747 aaPredicted RBP11.01□□□□□ -0.65
CLHC1-205ENST00000411884 MNX1P50219 401 aaPredicted RBP11□□□□□ -0.65
CLHC1-205ENST00000411884 CHRDL2Q6WN34 429 aa10.98□□□□□ -0.65
CLHC1-205ENST00000411884 FXR2P51116 673 aaKnown RBP eCLIP10.96□□□□□ -0.65
CLHC1-205ENST00000411884 CHADLQ6NUI6 762 aa10.95□□□□□ -0.66
CLHC1-205ENST00000411884 PKD2Q13563 968 aa10.93□□□□□ -0.66
CLHC1-205ENST00000411884 NUBP1P53384 320 aa10.91□□□□□ -0.66
CLHC1-205ENST00000411884 PRKAR2AP13861 404 aaKnown RBP10.9□□□□□ -0.66
CLHC1-205ENST00000411884 PIP4P2Q8N4L2 257 aa10.89□□□□□ -0.67
CLHC1-205ENST00000411884 FARP1Q9Y4F1 1045 aaPredicted RBP10.86□□□□□ -0.67
CLHC1-205ENST00000411884 NPM1P06748 294 aaKnown RBP eCLIP10.84□□□□□ -0.67
CLHC1-205ENST00000411884 RASEFQ8IZ41 740 aa10.82□□□□□ -0.68
CLHC1-205ENST00000411884 CIZ1Q9ULV3 898 aaPredicted RBP10.82□□□□□ -0.68
CLHC1-205ENST00000411884 ECM2O94769 699 aaPredicted RBP10.78□□□□□ -0.68
CLHC1-205ENST00000411884 GSE1Q14687 1217 aa10.78□□□□□ -0.68
CLHC1-205ENST00000411884 DCAF8Q5TAQ9 597 aa10.78□□□□□ -0.68
CLHC1-205ENST00000411884 POTEHQ6S545 545 aa10.77□□□□□ -0.69
CLHC1-205ENST00000411884 FAM212AQ96EL1 285 aa10.77□□□□□ -0.69
CLHC1-205ENST00000411884 TRIM41Q8WV44 630 aa10.72□□□□□ -0.69
CLHC1-205ENST00000411884 RGL2O15211 777 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms