RNA–Protein interactions for RNA: ENST00000411496.1

TTC3-205, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-205ENST00000411496 AEBP2Q6ZN18 517 aaPredicted RBP25.67■■□□□ 1.7
TTC3-205ENST00000411496 CHIC1Q5VXU3 224 aa25.42■■□□□ 1.66
TTC3-205ENST00000411496 PHF23Q9BUL5 403 aaPredicted RBP22.33■■□□□ 1.17
TTC3-205ENST00000411496 SENP3Q9H4L4 574 aaPredicted RBP21.85■■□□□ 1.09
TTC3-205ENST00000411496 PLPPR3Q6T4P5 718 aa20.81■□□□□ 0.92
TTC3-205ENST00000411496 FOXD1Q16676 465 aa20.17■□□□□ 0.82
TTC3-205ENST00000411496 ADRA2BP18089 450 aa19.6■□□□□ 0.73
TTC3-205ENST00000411496 PPP6R1Q9UPN7 881 aa19.6■□□□□ 0.73
TTC3-205ENST00000411496 PIAS4Q8N2W9 510 aaPredicted RBP19.1■□□□□ 0.65
TTC3-205ENST00000411496 MSH5O43196 834 aa18.58■□□□□ 0.56
TTC3-205ENST00000411496 PPP4R3CPQ6ZMV5 832 aa18.33■□□□□ 0.52
TTC3-205ENST00000411496 KCNA4P22459 653 aa18.17■□□□□ 0.5
TTC3-205ENST00000411496 SCAF1Q9H7N4 1312 aaKnown RBP18.09■□□□□ 0.49
TTC3-205ENST00000411496 NCBP3Q53F19 620 aaKnown RBP18.01■□□□□ 0.47
TTC3-205ENST00000411496 CNKSR2Q8WXI2 1034 aa17.8■□□□□ 0.44
TTC3-205ENST00000411496 MAPK8IP2Q13387 824 aaPredicted RBP17.68■□□□□ 0.42
TTC3-205ENST00000411496 NPM3O75607 178 aaKnown RBP17.64■□□□□ 0.41
TTC3-205ENST00000411496 DMRT2Q9Y5R5 561 aa17.46■□□□□ 0.39
TTC3-205ENST00000411496 SLC4A1APQ9BWU0 796 aaKnown RBP17.4■□□□□ 0.38
TTC3-205ENST00000411496 RNF216Q9NWF9 866 aaPredicted RBP17.38■□□□□ 0.37
TTC3-205ENST00000411496 HOXD11P31277 338 aaPredicted RBP17.23■□□□□ 0.35
TTC3-205ENST00000411496 DNAJC5BQ9UF47 199 aa17.23■□□□□ 0.35
TTC3-205ENST00000411496 EHMT2Q96KQ7 1210 aa17.14■□□□□ 0.33
TTC3-205ENST00000411496 CSRNP3Q8WYN3 585 aa16.87■□□□□ 0.29
TTC3-205ENST00000411496 FOXD4L1Q9NU39 408 aa16.7■□□□□ 0.26
TTC3-205ENST00000411496 ZBTB22O15209 634 aa16.68■□□□□ 0.26
TTC3-205ENST00000411496 DCAF8L1A6NGE4 600 aa16.64■□□□□ 0.25
TTC3-205ENST00000411496 SLC4A2P04920 1241 aa16.58■□□□□ 0.24
TTC3-205ENST00000411496 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.4■□□□□ 0.223e-7■■□□□ 12.8
TTC3-205ENST00000411496 MYCNP04198 464 aaPredicted RBP16.35■□□□□ 0.21
TTC3-205ENST00000411496 POTEDQ86YR6 584 aa16.34■□□□□ 0.21
TTC3-205ENST00000411496 ATXN8OSP0DMR3 200 aa16.17■□□□□ 0.18
TTC3-205ENST00000411496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.16■□□□□ 0.18
TTC3-205ENST00000411496 HNRNPUL2Q1KMD3 747 aaKnown RBP16.16■□□□□ 0.18
TTC3-205ENST00000411496 U3KPZ7 1027 aaPredicted RBP16.13■□□□□ 0.17
TTC3-205ENST00000411496 SAMD1Q6SPF0 538 aaPredicted RBP16.08■□□□□ 0.16
TTC3-205ENST00000411496 APLP2Q06481 763 aa15.93■□□□□ 0.14
TTC3-205ENST00000411496 RNF39Q9H2S5 420 aa15.9■□□□□ 0.14
TTC3-205ENST00000411496 C1QBPQ07021 282 aaKnown RBP15.79■□□□□ 0.12
TTC3-205ENST00000411496 ATF5Q9Y2D1 282 aaPredicted RBP15.78■□□□□ 0.12
TTC3-205ENST00000411496 ZNF219Q9P2Y4 722 aaPredicted RBP15.6■□□□□ 0.09
TTC3-205ENST00000411496 SPINK5Q9NQ38 1064 aaPredicted RBP15.56■□□□□ 0.08
TTC3-205ENST00000411496 CAPN15O75808 1086 aa15.53■□□□□ 0.08
TTC3-205ENST00000411496 TRHP20396 242 aaPredicted RBP15.51■□□□□ 0.07
TTC3-205ENST00000411496 POLA2Q14181 598 aa15.35■□□□□ 0.05
TTC3-205ENST00000411496 CACNB1Q02641 598 aaPredicted RBP15.28■□□□□ 0.04
TTC3-205ENST00000411496 FBLN2P98095 1184 aa15.23■□□□□ 0.03
TTC3-205ENST00000411496 FKBP8Q14318 412 aa15.23■□□□□ 0.03
TTC3-205ENST00000411496 ZBTB12Q9Y330 459 aaPredicted RBP15.22■□□□□ 0.03
TTC3-205ENST00000411496 DSG3P32926 999 aa15.21■□□□□ 0.03
TTC3-205ENST00000411496 ABCB7O75027 752 aa15.2■□□□□ 0.02
TTC3-205ENST00000411496 MKRN4PQ13434 485 aaPredicted RBP15.14■□□□□ 0.01
TTC3-205ENST00000411496 SPDYE4A6NLX3 237 aa14.99□□□□□ -0.01
TTC3-205ENST00000411496 PROM2Q8N271 834 aa14.8□□□□□ -0.04
TTC3-205ENST00000411496 SPDYE2BA6NHP3 402 aa14.79□□□□□ -0.04
TTC3-205ENST00000411496 SPDYE6P0CI01 402 aa14.79□□□□□ -0.04
TTC3-205ENST00000411496 SPDYE2Q495Y8 402 aa14.79□□□□□ -0.04
TTC3-205ENST00000411496 OSCARQ8IYS5 282 aa14.77□□□□□ -0.05
TTC3-205ENST00000411496 ZNF692Q9BU19 519 aaPredicted RBP14.74□□□□□ -0.05
TTC3-205ENST00000411496 FBXO3Q9UK99 471 aa14.73□□□□□ -0.05
TTC3-205ENST00000411496 SSUH2Q9Y2M2 353 aa14.67□□□□□ -0.06
TTC3-205ENST00000411496 RBM42Q9BTD8 480 aaKnown RBP14.57□□□□□ -0.08
TTC3-205ENST00000411496 PABPN1Q86U42 306 aaKnown RBP eCLIP14.53□□□□□ -0.08
TTC3-205ENST00000411496 STAG3Q9UJ98 1225 aa14.46□□□□□ -0.09
TTC3-205ENST00000411496 VASPP50552 380 aaPredicted RBP14.44□□□□□ -0.1
TTC3-205ENST00000411496 AMER1Q5JTC6 1135 aaPredicted RBP14.44□□□□□ -0.1
TTC3-205ENST00000411496 AKT1S1Q96B36 256 aa14.43□□□□□ -0.1
TTC3-205ENST00000411496 RTN4Q9NQC3 1192 aaKnown RBP14.31□□□□□ -0.12
TTC3-205ENST00000411496 SPDYE1Q8NFV5 336 aaPredicted RBP14.29□□□□□ -0.12
TTC3-205ENST00000411496 REM2Q8IYK8 340 aaPredicted RBP14.25□□□□□ -0.13
TTC3-205ENST00000411496 IFNLR1Q8IU57 520 aaPredicted RBP14.24□□□□□ -0.13
TTC3-205ENST00000411496 PLCD3Q8N3E9 789 aa14.21□□□□□ -0.13
TTC3-205ENST00000411496 MIER1Q8N108 512 aa14.2□□□□□ -0.14
TTC3-205ENST00000411496 PLEKHG5O94827 1062 aa14.17□□□□□ -0.14
TTC3-205ENST00000411496 KLHL34Q8N239 644 aa14.14□□□□□ -0.15
TTC3-205ENST00000411496 CLEC11AQ9Y240 323 aa14.13□□□□□ -0.15
TTC3-205ENST00000411496 ZBTB47Q9UFB7 747 aaPredicted RBP14.11□□□□□ -0.15
TTC3-205ENST00000411496 PRR29P0C7W0 189 aa14.1□□□□□ -0.15
TTC3-205ENST00000411496 SPOCK2Q92563 424 aa14.08□□□□□ -0.16
TTC3-205ENST00000411496 PITPNM1O00562 1244 aa14.05□□□□□ -0.16
TTC3-205ENST00000411496 CREBZFQ9NS37 354 aa13.94□□□□□ -0.18
TTC3-205ENST00000411496 PKD2Q13563 968 aa13.87□□□□□ -0.19
TTC3-205ENST00000411496 MNX1P50219 401 aaPredicted RBP13.83□□□□□ -0.2
TTC3-205ENST00000411496 NPM1P06748 294 aaKnown RBP eCLIP13.8□□□□□ -0.2
TTC3-205ENST00000411496 CHRDL2Q6WN34 429 aa13.79□□□□□ -0.2
TTC3-205ENST00000411496 NUBP1P53384 320 aa13.78□□□□□ -0.2
TTC3-205ENST00000411496 GSE1Q14687 1217 aa13.78□□□□□ -0.2
TTC3-205ENST00000411496 FXR2P51116 673 aaKnown RBP eCLIP13.77□□□□□ -0.219e-7■■□□□ 11.8
TTC3-205ENST00000411496 CIZ1Q9ULV3 898 aaPredicted RBP13.77□□□□□ -0.21
TTC3-205ENST00000411496 TRIM41Q8WV44 630 aa13.76□□□□□ -0.21
TTC3-205ENST00000411496 ECM2O94769 699 aaPredicted RBP13.75□□□□□ -0.21
TTC3-205ENST00000411496 PRKAR2AP13861 404 aaKnown RBP13.72□□□□□ -0.21
TTC3-205ENST00000411496 CHADLQ6NUI6 762 aa13.72□□□□□ -0.21
TTC3-205ENST00000411496 FAM212AQ96EL1 285 aa13.7□□□□□ -0.22
TTC3-205ENST00000411496 FARP1Q9Y4F1 1045 aaPredicted RBP13.7□□□□□ -0.22
TTC3-205ENST00000411496 DCAF8Q5TAQ9 597 aa13.69□□□□□ -0.22
TTC3-205ENST00000411496 PIP4P2Q8N4L2 257 aa13.65□□□□□ -0.22
TTC3-205ENST00000411496 RASEFQ8IZ41 740 aa13.63□□□□□ -0.23
TTC3-205ENST00000411496 DCAF8L2P0C7V8 631 aa13.61□□□□□ -0.23
TTC3-205ENST00000411496 RGL2O15211 777 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms