RNA–Protein interactions for RNA: ENST00000410991.1

RNU2-41P-201, Transcript of RNA, U2 small nuclear 41, pseudogene, humanhuman

BASIC

Gene RNU2-41P, Length 178 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-41P-201ENST00000410991 AEBP2Q6ZN18 517 aaPredicted RBP25.82■■□□□ 1.72
RNU2-41P-201ENST00000410991 CHIC1Q5VXU3 224 aa24.33■■□□□ 1.49
RNU2-41P-201ENST00000410991 SENP3Q9H4L4 574 aaPredicted RBP21.93■■□□□ 1.1
RNU2-41P-201ENST00000410991 PHF23Q9BUL5 403 aaPredicted RBP21.68■■□□□ 1.06
RNU2-41P-201ENST00000410991 FOXD1Q16676 465 aa20.53■□□□□ 0.88
RNU2-41P-201ENST00000410991 PLPPR3Q6T4P5 718 aa19.36■□□□□ 0.69
RNU2-41P-201ENST00000410991 PIAS4Q8N2W9 510 aaPredicted RBP19.17■□□□□ 0.66
RNU2-41P-201ENST00000410991 PPP6R1Q9UPN7 881 aa19.15■□□□□ 0.66
RNU2-41P-201ENST00000410991 MSH5O43196 834 aa19.14■□□□□ 0.65
RNU2-41P-201ENST00000410991 ADRA2BP18089 450 aa19.1■□□□□ 0.65
RNU2-41P-201ENST00000410991 POTEDQ86YR6 584 aa18.97■□□□□ 0.63
RNU2-41P-201ENST00000410991 MAPK8IP2Q13387 824 aaPredicted RBP17.59■□□□□ 0.41
RNU2-41P-201ENST00000410991 DMRT2Q9Y5R5 561 aa17.39■□□□□ 0.37
RNU2-41P-201ENST00000410991 SCAF1Q9H7N4 1312 aaKnown RBP17.29■□□□□ 0.36
RNU2-41P-201ENST00000410991 PPP4R3CPQ6ZMV5 832 aa17.01■□□□□ 0.31
RNU2-41P-201ENST00000410991 DCAF8L1A6NGE4 600 aa16.79■□□□□ 0.28
RNU2-41P-201ENST00000410991 HOXD11P31277 338 aaPredicted RBP16.68■□□□□ 0.26
RNU2-41P-201ENST00000410991 CNKSR2Q8WXI2 1034 aa16.66■□□□□ 0.26
RNU2-41P-201ENST00000410991 CACNB1Q02641 598 aaPredicted RBP16.57■□□□□ 0.24
RNU2-41P-201ENST00000410991 RNF216Q9NWF9 866 aaPredicted RBP16.53■□□□□ 0.24
RNU2-41P-201ENST00000410991 RNF39Q9H2S5 420 aa16.37■□□□□ 0.21
RNU2-41P-201ENST00000410991 NCBP3Q53F19 620 aaKnown RBP16.24■□□□□ 0.19
RNU2-41P-201ENST00000410991 NPM3O75607 178 aaKnown RBP16.11■□□□□ 0.17
RNU2-41P-201ENST00000410991 C1QBPQ07021 282 aaKnown RBP16.07■□□□□ 0.16
RNU2-41P-201ENST00000410991 DNAJC5BQ9UF47 199 aa15.99■□□□□ 0.15
RNU2-41P-201ENST00000410991 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.95■□□□□ 0.14
RNU2-41P-201ENST00000410991 KCNA4P22459 653 aa15.75■□□□□ 0.11
RNU2-41P-201ENST00000410991 U3KPZ7 1027 aaPredicted RBP15.63■□□□□ 0.09
RNU2-41P-201ENST00000410991 SPINK5Q9NQ38 1064 aaPredicted RBP15.48■□□□□ 0.07
RNU2-41P-201ENST00000410991 CAPN15O75808 1086 aa15.42■□□□□ 0.06
RNU2-41P-201ENST00000410991 SLC4A2P04920 1241 aa15.42■□□□□ 0.06
RNU2-41P-201ENST00000410991 DSG3P32926 999 aa15.32■□□□□ 0.04
RNU2-41P-201ENST00000410991 TRHP20396 242 aaPredicted RBP15.17■□□□□ 0.02
RNU2-41P-201ENST00000410991 ABCB7O75027 752 aa15.12■□□□□ 0.01
RNU2-41P-201ENST00000410991 ZNF219Q9P2Y4 722 aaPredicted RBP15.03■□□□□ -0
RNU2-41P-201ENST00000410991 APLP2Q06481 763 aa15.02■□□□□ -0
RNU2-41P-201ENST00000410991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.01□□□□□ -0.01
RNU2-41P-201ENST00000410991 HNRNPUL2Q1KMD3 747 aaKnown RBP15.01□□□□□ -0.01
RNU2-41P-201ENST00000410991 SAMD1Q6SPF0 538 aaPredicted RBP14.95□□□□□ -0.02
RNU2-41P-201ENST00000410991 MYCNP04198 464 aaPredicted RBP14.85□□□□□ -0.03
RNU2-41P-201ENST00000410991 POTEHQ6S545 545 aa14.83□□□□□ -0.04
RNU2-41P-201ENST00000410991 SLC4A1APQ9BWU0 796 aaKnown RBP14.8□□□□□ -0.04
RNU2-41P-201ENST00000410991 POLA2Q14181 598 aa14.7□□□□□ -0.06
RNU2-41P-201ENST00000410991 FOXD4L1Q9NU39 408 aa14.66□□□□□ -0.06
RNU2-41P-201ENST00000410991 ATF5Q9Y2D1 282 aaPredicted RBP14.63□□□□□ -0.07
RNU2-41P-201ENST00000410991 RBM42Q9BTD8 480 aaKnown RBP14.54□□□□□ -0.08
RNU2-41P-201ENST00000410991 ZBTB22O15209 634 aa14.51□□□□□ -0.09
RNU2-41P-201ENST00000410991 CHRDL2Q6WN34 429 aa14.34□□□□□ -0.11
RNU2-41P-201ENST00000410991 OSCARQ8IYS5 282 aa14.3□□□□□ -0.12
RNU2-41P-201ENST00000410991 ZBTB12Q9Y330 459 aaPredicted RBP14.28□□□□□ -0.12
RNU2-41P-201ENST00000410991 AKT1S1Q96B36 256 aa14.21□□□□□ -0.13
RNU2-41P-201ENST00000410991 REM2Q8IYK8 340 aaPredicted RBP14.13□□□□□ -0.15
RNU2-41P-201ENST00000410991 ATXN8OSP0DMR3 200 aa14.12□□□□□ -0.15
RNU2-41P-201ENST00000410991 PITPNM1O00562 1244 aa14.02□□□□□ -0.17
RNU2-41P-201ENST00000410991 PIP4P2Q8N4L2 257 aa14□□□□□ -0.17
RNU2-41P-201ENST00000410991 FBLN2P98095 1184 aa13.95□□□□□ -0.18
RNU2-41P-201ENST00000410991 MKRN4PQ13434 485 aaPredicted RBP13.92□□□□□ -0.18
RNU2-41P-201ENST00000410991 SPDYE2BA6NHP3 402 aa13.88□□□□□ -0.19
RNU2-41P-201ENST00000410991 SPDYE6P0CI01 402 aa13.88□□□□□ -0.19
RNU2-41P-201ENST00000410991 SPDYE2Q495Y8 402 aa13.88□□□□□ -0.19
RNU2-41P-201ENST00000410991 FXR2P51116 673 aaKnown RBP eCLIP13.85□□□□□ -0.19
RNU2-41P-201ENST00000410991 SP7Q8TDD2 431 aaPredicted RBP13.84□□□□□ -0.19
RNU2-41P-201ENST00000410991 HAX1O00165 279 aa13.77□□□□□ -0.21
RNU2-41P-201ENST00000410991 CLEC11AQ9Y240 323 aa13.75□□□□□ -0.21
RNU2-41P-201ENST00000410991 ZNF692Q9BU19 519 aaPredicted RBP13.74□□□□□ -0.21
RNU2-41P-201ENST00000410991 CSRNP3Q8WYN3 585 aa13.7□□□□□ -0.22
RNU2-41P-201ENST00000410991 SSUH2Q9Y2M2 353 aa13.7□□□□□ -0.22
RNU2-41P-201ENST00000410991 SPDYE1Q8NFV5 336 aaPredicted RBP13.67□□□□□ -0.22
RNU2-41P-201ENST00000410991 PRKAR2AP13861 404 aaKnown RBP13.65□□□□□ -0.22
RNU2-41P-201ENST00000410991 EVX2Q03828 476 aa13.65□□□□□ -0.22
RNU2-41P-201ENST00000410991 PABPN1Q86U42 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
RNU2-41P-201ENST00000410991 EHMT2Q96KQ7 1210 aa13.56□□□□□ -0.24
RNU2-41P-201ENST00000410991 CHADLQ6NUI6 762 aa13.54□□□□□ -0.24
RNU2-41P-201ENST00000410991 PRR29P0C7W0 189 aa13.44□□□□□ -0.26
RNU2-41P-201ENST00000410991 C19orf67A6NJJ6 358 aa13.42□□□□□ -0.26
RNU2-41P-201ENST00000410991 GABBR2O75899 941 aa13.27□□□□□ -0.29
RNU2-41P-201ENST00000410991 FARP1Q9Y4F1 1045 aaPredicted RBP13.23□□□□□ -0.29
RNU2-41P-201ENST00000410991 CD44P16070 742 aaKnown RBP13.2□□□□□ -0.3
RNU2-41P-201ENST00000410991 SPDYE4A6NLX3 237 aa13.17□□□□□ -0.3
RNU2-41P-201ENST00000410991 CREBZFQ9NS37 354 aa13.11□□□□□ -0.31
RNU2-41P-201ENST00000410991 STAG3Q9UJ98 1225 aa13.05□□□□□ -0.32
RNU2-41P-201ENST00000410991 POTEIP0CG38 1075 aa13.03□□□□□ -0.32
RNU2-41P-201ENST00000410991 ZRANB1Q9UGI0 708 aa13□□□□□ -0.33
RNU2-41P-201ENST00000410991 LHX8Q68G74 356 aa12.99□□□□□ -0.33
RNU2-41P-201ENST00000410991 ZNF579Q8NAF0 562 aaKnown RBP12.94□□□□□ -0.34
RNU2-41P-201ENST00000410991 GALR2O43603 387 aaPredicted RBP12.88□□□□□ -0.35
RNU2-41P-201ENST00000410991 DCBLD2Q96PD2 775 aa12.88□□□□□ -0.35
RNU2-41P-201ENST00000410991 PHF12Q96QT6 1004 aa12.87□□□□□ -0.35
RNU2-41P-201ENST00000410991 MNX1P50219 401 aaPredicted RBP12.86□□□□□ -0.35
RNU2-41P-201ENST00000410991 CLCN6P51797 869 aa12.83□□□□□ -0.36
RNU2-41P-201ENST00000410991 PAK3O75914 559 aaPredicted RBP12.8□□□□□ -0.36
RNU2-41P-201ENST00000410991 NPM1P06748 294 aaKnown RBP eCLIP12.79□□□□□ -0.36
RNU2-41P-201ENST00000410991 PROM2Q8N271 834 aa12.78□□□□□ -0.36
RNU2-41P-201ENST00000410991 TSPYL2Q9H2G4 693 aaPredicted RBP12.68□□□□□ -0.38
RNU2-41P-201ENST00000410991 MS4A3Q96HJ5 214 aa12.67□□□□□ -0.38
RNU2-41P-201ENST00000410991 PELP1Q8IZL8 1130 aaKnown RBP12.64□□□□□ -0.39
RNU2-41P-201ENST00000410991 POTEB2H3BUK9 544 aa12.62□□□□□ -0.39
RNU2-41P-201ENST00000410991 MIER1Q8N108 512 aa12.58□□□□□ -0.4
RNU2-41P-201ENST00000410991 CCDC61Q9Y6R9 512 aa12.57□□□□□ -0.4
RNU2-41P-201ENST00000410991 OTUD5Q96G74 571 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms