RNA–Protein interactions for RNA: ENST00000410194.1

RNU2-9P-201, Transcript of RNA, U2 small nuclear 9, pseudogene, humanhuman

BASIC

Gene RNU2-9P, Length 145 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-9P-201ENST00000410194 AEBP2Q6ZN18 517 aaPredicted RBP18.76■□□□□ 0.59
RNU2-9P-201ENST00000410194 CHIC1Q5VXU3 224 aa18.36■□□□□ 0.53
RNU2-9P-201ENST00000410194 SENP3Q9H4L4 574 aaPredicted RBP16.09■□□□□ 0.17
RNU2-9P-201ENST00000410194 PHF23Q9BUL5 403 aaPredicted RBP16.04■□□□□ 0.16
RNU2-9P-201ENST00000410194 PLPPR3Q6T4P5 718 aa14.94□□□□□ -0.02
RNU2-9P-201ENST00000410194 FOXD1Q16676 465 aa14.82□□□□□ -0.04
RNU2-9P-201ENST00000410194 ADRA2BP18089 450 aa14.14□□□□□ -0.15
RNU2-9P-201ENST00000410194 PPP6R1Q9UPN7 881 aa14.14□□□□□ -0.15
RNU2-9P-201ENST00000410194 PIAS4Q8N2W9 510 aaPredicted RBP14□□□□□ -0.17
RNU2-9P-201ENST00000410194 MSH5O43196 834 aa13.84□□□□□ -0.19
RNU2-9P-201ENST00000410194 SCAF1Q9H7N4 1312 aaKnown RBP13.14□□□□□ -0.31
RNU2-9P-201ENST00000410194 PPP4R3CPQ6ZMV5 832 aa13.09□□□□□ -0.31
RNU2-9P-201ENST00000410194 NCBP3Q53F19 620 aaKnown RBP12.83□□□□□ -0.36
RNU2-9P-201ENST00000410194 MAPK8IP2Q13387 824 aaPredicted RBP12.82□□□□□ -0.36
RNU2-9P-201ENST00000410194 DMRT2Q9Y5R5 561 aa12.8□□□□□ -0.36
RNU2-9P-201ENST00000410194 CNKSR2Q8WXI2 1034 aa12.79□□□□□ -0.36
RNU2-9P-201ENST00000410194 KCNA4P22459 653 aa12.64□□□□□ -0.39
RNU2-9P-201ENST00000410194 POTEDQ86YR6 584 aa12.6□□□□□ -0.39
RNU2-9P-201ENST00000410194 RNF216Q9NWF9 866 aaPredicted RBP12.57□□□□□ -0.4
RNU2-9P-201ENST00000410194 NPM3O75607 178 aaKnown RBP12.52□□□□□ -0.41
RNU2-9P-201ENST00000410194 HOXD11P31277 338 aaPredicted RBP12.52□□□□□ -0.41
RNU2-9P-201ENST00000410194 DNAJC5BQ9UF47 199 aa12.33□□□□□ -0.44
RNU2-9P-201ENST00000410194 DCAF8L1A6NGE4 600 aa12.18□□□□□ -0.46
RNU2-9P-201ENST00000410194 SLC4A1APQ9BWU0 796 aaKnown RBP12.09□□□□□ -0.47
RNU2-9P-201ENST00000410194 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.91□□□□□ -0.5
RNU2-9P-201ENST00000410194 SLC4A2P04920 1241 aa11.81□□□□□ -0.52
RNU2-9P-201ENST00000410194 RNF39Q9H2S5 420 aa11.78□□□□□ -0.52
RNU2-9P-201ENST00000410194 FOXD4L1Q9NU39 408 aa11.76□□□□□ -0.53
RNU2-9P-201ENST00000410194 C1QBPQ07021 282 aaKnown RBP11.71□□□□□ -0.53
RNU2-9P-201ENST00000410194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.67□□□□□ -0.54
RNU2-9P-201ENST00000410194 HNRNPUL2Q1KMD3 747 aaKnown RBP11.67□□□□□ -0.54
RNU2-9P-201ENST00000410194 U3KPZ7 1027 aaPredicted RBP11.67□□□□□ -0.54
RNU2-9P-201ENST00000410194 MYCNP04198 464 aaPredicted RBP11.65□□□□□ -0.54
RNU2-9P-201ENST00000410194 APLP2Q06481 763 aa11.6□□□□□ -0.55
RNU2-9P-201ENST00000410194 ZBTB22O15209 634 aa11.59□□□□□ -0.55
RNU2-9P-201ENST00000410194 SAMD1Q6SPF0 538 aaPredicted RBP11.58□□□□□ -0.56
RNU2-9P-201ENST00000410194 EHMT2Q96KQ7 1210 aa11.57□□□□□ -0.56
RNU2-9P-201ENST00000410194 CACNB1Q02641 598 aaPredicted RBP11.52□□□□□ -0.57
RNU2-9P-201ENST00000410194 CSRNP3Q8WYN3 585 aa11.51□□□□□ -0.57
RNU2-9P-201ENST00000410194 ATXN8OSP0DMR3 200 aa11.42□□□□□ -0.58
RNU2-9P-201ENST00000410194 ZNF219Q9P2Y4 722 aaPredicted RBP11.36□□□□□ -0.59
RNU2-9P-201ENST00000410194 CAPN15O75808 1086 aa11.33□□□□□ -0.6
RNU2-9P-201ENST00000410194 SPINK5Q9NQ38 1064 aaPredicted RBP11.31□□□□□ -0.6
RNU2-9P-201ENST00000410194 TRHP20396 242 aaPredicted RBP11.24□□□□□ -0.61
RNU2-9P-201ENST00000410194 ATF5Q9Y2D1 282 aaPredicted RBP11.17□□□□□ -0.62
RNU2-9P-201ENST00000410194 DSG3P32926 999 aa11.16□□□□□ -0.62
RNU2-9P-201ENST00000410194 ABCB7O75027 752 aa11.05□□□□□ -0.64
RNU2-9P-201ENST00000410194 POLA2Q14181 598 aa11.05□□□□□ -0.64
RNU2-9P-201ENST00000410194 ZBTB12Q9Y330 459 aaPredicted RBP11.03□□□□□ -0.64
RNU2-9P-201ENST00000410194 FBLN2P98095 1184 aa10.89□□□□□ -0.67
RNU2-9P-201ENST00000410194 RBM42Q9BTD8 480 aaKnown RBP10.77□□□□□ -0.69
RNU2-9P-201ENST00000410194 MKRN4PQ13434 485 aaPredicted RBP10.73□□□□□ -0.69
RNU2-9P-201ENST00000410194 SPDYE2BA6NHP3 402 aa10.67□□□□□ -0.7
RNU2-9P-201ENST00000410194 SPDYE6P0CI01 402 aa10.67□□□□□ -0.7
RNU2-9P-201ENST00000410194 SPDYE2Q495Y8 402 aa10.67□□□□□ -0.7
RNU2-9P-201ENST00000410194 OSCARQ8IYS5 282 aa10.67□□□□□ -0.7
RNU2-9P-201ENST00000410194 AKT1S1Q96B36 256 aa10.57□□□□□ -0.72
RNU2-9P-201ENST00000410194 ZNF692Q9BU19 519 aaPredicted RBP10.55□□□□□ -0.72
RNU2-9P-201ENST00000410194 SSUH2Q9Y2M2 353 aa10.54□□□□□ -0.72
RNU2-9P-201ENST00000410194 SPDYE4A6NLX3 237 aa10.52□□□□□ -0.73
RNU2-9P-201ENST00000410194 FKBP8Q14318 412 aa10.43□□□□□ -0.74
RNU2-9P-201ENST00000410194 REM2Q8IYK8 340 aaPredicted RBP10.4□□□□□ -0.74
RNU2-9P-201ENST00000410194 PABPN1Q86U42 306 aaKnown RBP eCLIP10.39□□□□□ -0.75
RNU2-9P-201ENST00000410194 PROM2Q8N271 834 aa10.38□□□□□ -0.75
RNU2-9P-201ENST00000410194 SPDYE1Q8NFV5 336 aaPredicted RBP10.36□□□□□ -0.75
RNU2-9P-201ENST00000410194 STAG3Q9UJ98 1225 aa10.33□□□□□ -0.76
RNU2-9P-201ENST00000410194 PITPNM1O00562 1244 aa10.27□□□□□ -0.77
RNU2-9P-201ENST00000410194 CHRDL2Q6WN34 429 aa10.25□□□□□ -0.77
RNU2-9P-201ENST00000410194 FBXO3Q9UK99 471 aa10.22□□□□□ -0.77
RNU2-9P-201ENST00000410194 CLEC11AQ9Y240 323 aa10.22□□□□□ -0.77
RNU2-9P-201ENST00000410194 PRR29P0C7W0 189 aa10.18□□□□□ -0.78
RNU2-9P-201ENST00000410194 FXR2P51116 673 aaKnown RBP eCLIP10.12□□□□□ -0.79
RNU2-9P-201ENST00000410194 PIP4P2Q8N4L2 257 aa10.07□□□□□ -0.8
RNU2-9P-201ENST00000410194 PLEKHG5O94827 1062 aa10.06□□□□□ -0.8
RNU2-9P-201ENST00000410194 PRKAR2AP13861 404 aaKnown RBP10.02□□□□□ -0.81
RNU2-9P-201ENST00000410194 VASPP50552 380 aaPredicted RBP9.99□□□□□ -0.81
RNU2-9P-201ENST00000410194 POTEHQ6S545 545 aa9.99□□□□□ -0.81
RNU2-9P-201ENST00000410194 ZBTB47Q9UFB7 747 aaPredicted RBP9.99□□□□□ -0.81
RNU2-9P-201ENST00000410194 MIER1Q8N108 512 aa9.98□□□□□ -0.81
RNU2-9P-201ENST00000410194 PLCD3Q8N3E9 789 aa9.98□□□□□ -0.81
RNU2-9P-201ENST00000410194 CREBZFQ9NS37 354 aa9.98□□□□□ -0.81
RNU2-9P-201ENST00000410194 NPM1P06748 294 aaKnown RBP eCLIP9.93□□□□□ -0.82
RNU2-9P-201ENST00000410194 CHADLQ6NUI6 762 aa9.93□□□□□ -0.82
RNU2-9P-201ENST00000410194 FARP1Q9Y4F1 1045 aaPredicted RBP9.92□□□□□ -0.82
RNU2-9P-201ENST00000410194 MNX1P50219 401 aaPredicted RBP9.87□□□□□ -0.83
RNU2-9P-201ENST00000410194 KLHL34Q8N239 644 aa9.82□□□□□ -0.84
RNU2-9P-201ENST00000410194 IFNLR1Q8IU57 520 aaPredicted RBP9.79□□□□□ -0.84
RNU2-9P-201ENST00000410194 C19orf67A6NJJ6 358 aa9.78□□□□□ -0.84
RNU2-9P-201ENST00000410194 PAK3O75914 559 aaPredicted RBP9.78□□□□□ -0.84
RNU2-9P-201ENST00000410194 HAX1O00165 279 aa9.77□□□□□ -0.85
RNU2-9P-201ENST00000410194 SPOCK2Q92563 424 aa9.77□□□□□ -0.85
RNU2-9P-201ENST00000410194 CD44P16070 742 aaKnown RBP9.74□□□□□ -0.85
RNU2-9P-201ENST00000410194 NUBP1P53384 320 aa9.73□□□□□ -0.85
RNU2-9P-201ENST00000410194 FAM212AQ96EL1 285 aa9.72□□□□□ -0.85
RNU2-9P-201ENST00000410194 CLCN6P51797 869 aa9.7□□□□□ -0.86
RNU2-9P-201ENST00000410194 GSE1Q14687 1217 aa9.69□□□□□ -0.86
RNU2-9P-201ENST00000410194 RASEFQ8IZ41 740 aa9.67□□□□□ -0.86
RNU2-9P-201ENST00000410194 ZRANB1Q9UGI0 708 aa9.66□□□□□ -0.86
RNU2-9P-201ENST00000410194 ZNF579Q8NAF0 562 aaKnown RBP9.65□□□□□ -0.86
RNU2-9P-201ENST00000410194 TRIM41Q8WV44 630 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms