RNA–Protein interactions for RNA: ENST00000410190.1

RNU6-648P-201, Transcript of RNA, U6 small nuclear 648, pseudogene, humanhuman

BASIC

Gene RNU6-648P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-648P-201ENST00000410190 AEBP2Q6ZN18 517 aaPredicted RBP30.98■■■□□ 2.55
RNU6-648P-201ENST00000410190 CHIC1Q5VXU3 224 aa29.35■■■□□ 2.29
RNU6-648P-201ENST00000410190 SENP3Q9H4L4 574 aaPredicted RBP26.27■■□□□ 1.8
RNU6-648P-201ENST00000410190 PHF23Q9BUL5 403 aaPredicted RBP25.97■■□□□ 1.75
RNU6-648P-201ENST00000410190 FOXD1Q16676 465 aa24.57■■□□□ 1.52
RNU6-648P-201ENST00000410190 PLPPR3Q6T4P5 718 aa23.37■■□□□ 1.33
RNU6-648P-201ENST00000410190 PPP6R1Q9UPN7 881 aa23.04■■□□□ 1.28
RNU6-648P-201ENST00000410190 ADRA2BP18089 450 aa22.9■■□□□ 1.26
RNU6-648P-201ENST00000410190 MSH5O43196 834 aa22.88■■□□□ 1.25
RNU6-648P-201ENST00000410190 PIAS4Q8N2W9 510 aaPredicted RBP22.87■■□□□ 1.25
RNU6-648P-201ENST00000410190 POTEDQ86YR6 584 aa22.41■■□□□ 1.18
RNU6-648P-201ENST00000410190 MAPK8IP2Q13387 824 aaPredicted RBP21.05■□□□□ 0.96
RNU6-648P-201ENST00000410190 DMRT2Q9Y5R5 561 aa20.9■□□□□ 0.94
RNU6-648P-201ENST00000410190 SCAF1Q9H7N4 1312 aaKnown RBP20.79■□□□□ 0.92
RNU6-648P-201ENST00000410190 PPP4R3CPQ6ZMV5 832 aa20.53■□□□□ 0.88
RNU6-648P-201ENST00000410190 HOXD11P31277 338 aaPredicted RBP20.16■□□□□ 0.82
RNU6-648P-201ENST00000410190 CNKSR2Q8WXI2 1034 aa20.12■□□□□ 0.81
RNU6-648P-201ENST00000410190 RNF216Q9NWF9 866 aaPredicted RBP19.95■□□□□ 0.78
RNU6-648P-201ENST00000410190 DCAF8L1A6NGE4 600 aa19.85■□□□□ 0.77
RNU6-648P-201ENST00000410190 NCBP3Q53F19 620 aaKnown RBP19.63■□□□□ 0.73
RNU6-648P-201ENST00000410190 RNF39Q9H2S5 420 aa19.62■□□□□ 0.73
RNU6-648P-201ENST00000410190 CACNB1Q02641 598 aaPredicted RBP19.59■□□□□ 0.73
RNU6-648P-201ENST00000410190 NPM3O75607 178 aaKnown RBP19.5■□□□□ 0.71
RNU6-648P-201ENST00000410190 DNAJC5BQ9UF47 199 aa19.46■□□□□ 0.71
RNU6-648P-201ENST00000410190 C1QBPQ07021 282 aaKnown RBP19.27■□□□□ 0.68
RNU6-648P-201ENST00000410190 KCNA4P22459 653 aa19.13■□□□□ 0.65
RNU6-648P-201ENST00000410190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.05■□□□□ 0.64
RNU6-648P-201ENST00000410190 U3KPZ7 1027 aaPredicted RBP18.79■□□□□ 0.6
RNU6-648P-201ENST00000410190 SLC4A2P04920 1241 aa18.67■□□□□ 0.58
RNU6-648P-201ENST00000410190 SPINK5Q9NQ38 1064 aaPredicted RBP18.51■□□□□ 0.55
RNU6-648P-201ENST00000410190 DSG3P32926 999 aa18.37■□□□□ 0.53
RNU6-648P-201ENST00000410190 CAPN15O75808 1086 aa18.34■□□□□ 0.53
RNU6-648P-201ENST00000410190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.1■□□□□ 0.49
RNU6-648P-201ENST00000410190 HNRNPUL2Q1KMD3 747 aaKnown RBP18.1■□□□□ 0.49
RNU6-648P-201ENST00000410190 APLP2Q06481 763 aa18.07■□□□□ 0.48
RNU6-648P-201ENST00000410190 TRHP20396 242 aaPredicted RBP18.06■□□□□ 0.48
RNU6-648P-201ENST00000410190 ZNF219Q9P2Y4 722 aaPredicted RBP18.04■□□□□ 0.48
RNU6-648P-201ENST00000410190 SAMD1Q6SPF0 538 aaPredicted RBP18.03■□□□□ 0.48
RNU6-648P-201ENST00000410190 ABCB7O75027 752 aa17.98■□□□□ 0.47
RNU6-648P-201ENST00000410190 SLC4A1APQ9BWU0 796 aaKnown RBP17.98■□□□□ 0.47
RNU6-648P-201ENST00000410190 MYCNP04198 464 aaPredicted RBP17.97■□□□□ 0.47
RNU6-648P-201ENST00000410190 FOXD4L1Q9NU39 408 aa17.79■□□□□ 0.44
RNU6-648P-201ENST00000410190 ZBTB22O15209 634 aa17.68■□□□□ 0.42
RNU6-648P-201ENST00000410190 ATF5Q9Y2D1 282 aaPredicted RBP17.67■□□□□ 0.42
RNU6-648P-201ENST00000410190 POLA2Q14181 598 aa17.63■□□□□ 0.41
RNU6-648P-201ENST00000410190 POTEHQ6S545 545 aa17.52■□□□□ 0.4
RNU6-648P-201ENST00000410190 RBM42Q9BTD8 480 aaKnown RBP17.39■□□□□ 0.37
RNU6-648P-201ENST00000410190 ATXN8OSP0DMR3 200 aa17.26■□□□□ 0.35
RNU6-648P-201ENST00000410190 ZBTB12Q9Y330 459 aaPredicted RBP17.21■□□□□ 0.35
RNU6-648P-201ENST00000410190 OSCARQ8IYS5 282 aa17.09■□□□□ 0.33
RNU6-648P-201ENST00000410190 CHRDL2Q6WN34 429 aa17.08■□□□□ 0.32
RNU6-648P-201ENST00000410190 AKT1S1Q96B36 256 aa17.06■□□□□ 0.32
RNU6-648P-201ENST00000410190 REM2Q8IYK8 340 aaPredicted RBP16.93■□□□□ 0.3
RNU6-648P-201ENST00000410190 MKRN4PQ13434 485 aaPredicted RBP16.87■□□□□ 0.29
RNU6-648P-201ENST00000410190 CSRNP3Q8WYN3 585 aa16.81■□□□□ 0.28
RNU6-648P-201ENST00000410190 PITPNM1O00562 1244 aa16.77■□□□□ 0.28
RNU6-648P-201ENST00000410190 FBLN2P98095 1184 aa16.77■□□□□ 0.28
RNU6-648P-201ENST00000410190 SPDYE2BA6NHP3 402 aa16.74■□□□□ 0.27
RNU6-648P-201ENST00000410190 SPDYE6P0CI01 402 aa16.74■□□□□ 0.27
RNU6-648P-201ENST00000410190 SPDYE2Q495Y8 402 aa16.74■□□□□ 0.27
RNU6-648P-201ENST00000410190 PIP4P2Q8N4L2 257 aa16.72■□□□□ 0.27
RNU6-648P-201ENST00000410190 FXR2P51116 673 aaKnown RBP eCLIP16.64■□□□□ 0.25
RNU6-648P-201ENST00000410190 SSUH2Q9Y2M2 353 aa16.61■□□□□ 0.25
RNU6-648P-201ENST00000410190 ZNF692Q9BU19 519 aaPredicted RBP16.49■□□□□ 0.23
RNU6-648P-201ENST00000410190 EHMT2Q96KQ7 1210 aa16.47■□□□□ 0.23
RNU6-648P-201ENST00000410190 SP7Q8TDD2 431 aaPredicted RBP16.42■□□□□ 0.22
RNU6-648P-201ENST00000410190 SPDYE1Q8NFV5 336 aaPredicted RBP16.4■□□□□ 0.22
RNU6-648P-201ENST00000410190 CLEC11AQ9Y240 323 aa16.33■□□□□ 0.2
RNU6-648P-201ENST00000410190 HAX1O00165 279 aa16.29■□□□□ 0.2
RNU6-648P-201ENST00000410190 PABPN1Q86U42 306 aaKnown RBP eCLIP16.29■□□□□ 0.2
RNU6-648P-201ENST00000410190 EVX2Q03828 476 aa16.28■□□□□ 0.2
RNU6-648P-201ENST00000410190 PRKAR2AP13861 404 aaKnown RBP16.27■□□□□ 0.2
RNU6-648P-201ENST00000410190 CHADLQ6NUI6 762 aa16.12■□□□□ 0.17
RNU6-648P-201ENST00000410190 C19orf67A6NJJ6 358 aa16.11■□□□□ 0.17
RNU6-648P-201ENST00000410190 PRR29P0C7W0 189 aa16.08■□□□□ 0.16
RNU6-648P-201ENST00000410190 SPDYE4A6NLX3 237 aa15.93■□□□□ 0.14
RNU6-648P-201ENST00000410190 FARP1Q9Y4F1 1045 aaPredicted RBP15.88■□□□□ 0.13
RNU6-648P-201ENST00000410190 GABBR2O75899 941 aa15.83■□□□□ 0.12
RNU6-648P-201ENST00000410190 CREBZFQ9NS37 354 aa15.82■□□□□ 0.12
RNU6-648P-201ENST00000410190 STAG3Q9UJ98 1225 aa15.79■□□□□ 0.12
RNU6-648P-201ENST00000410190 CD44P16070 742 aaKnown RBP15.75■□□□□ 0.11
RNU6-648P-201ENST00000410190 PROM2Q8N271 834 aa15.73■□□□□ 0.11
RNU6-648P-201ENST00000410190 MNX1P50219 401 aaPredicted RBP15.63■□□□□ 0.09
RNU6-648P-201ENST00000410190 POTEIP0CG38 1075 aa15.59■□□□□ 0.09
RNU6-648P-201ENST00000410190 ZNF579Q8NAF0 562 aaKnown RBP15.57■□□□□ 0.08
RNU6-648P-201ENST00000410190 ZRANB1Q9UGI0 708 aa15.51■□□□□ 0.07
RNU6-648P-201ENST00000410190 CLCN6P51797 869 aa15.5■□□□□ 0.07
RNU6-648P-201ENST00000410190 GALR2O43603 387 aaPredicted RBP15.38■□□□□ 0.05
RNU6-648P-201ENST00000410190 LHX8Q68G74 356 aa15.38■□□□□ 0.05
RNU6-648P-201ENST00000410190 NPM1P06748 294 aaKnown RBP eCLIP15.37■□□□□ 0.05
RNU6-648P-201ENST00000410190 PHF12Q96QT6 1004 aa15.36■□□□□ 0.05
RNU6-648P-201ENST00000410190 PAK3O75914 559 aaPredicted RBP15.28■□□□□ 0.04
RNU6-648P-201ENST00000410190 DCBLD2Q96PD2 775 aa15.28■□□□□ 0.04
RNU6-648P-201ENST00000410190 CCDC61Q9Y6R9 512 aa15.18■□□□□ 0.02
RNU6-648P-201ENST00000410190 MS4A3Q96HJ5 214 aa15.16■□□□□ 0.02
RNU6-648P-201ENST00000410190 FKBP8Q14318 412 aa15.14■□□□□ 0.01
RNU6-648P-201ENST00000410190 MIER1Q8N108 512 aa15.14■□□□□ 0.01
RNU6-648P-201ENST00000410190 TSPYL2Q9H2G4 693 aaPredicted RBP15.14■□□□□ 0.01
RNU6-648P-201ENST00000410190 PELP1Q8IZL8 1130 aaKnown RBP15.13■□□□□ 0.01
RNU6-648P-201ENST00000410190 RASEFQ8IZ41 740 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms