RNA–Protein interactions for RNA: ENST00000409205.5

SUMO1-205, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 2 BASIC

Gene SUMO1, Length 534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-205ENST00000409205 AEBP2Q6ZN18 517 aaPredicted RBP32.13■■■□□ 2.73
SUMO1-205ENST00000409205 CHIC1Q5VXU3 224 aa30.39■■■□□ 2.46
SUMO1-205ENST00000409205 SENP3Q9H4L4 574 aaPredicted RBP27.49■■□□□ 1.99
SUMO1-205ENST00000409205 PHF23Q9BUL5 403 aaPredicted RBP27.09■■□□□ 1.93
SUMO1-205ENST00000409205 FOXD1Q16676 465 aa25.61■■□□□ 1.69
SUMO1-205ENST00000409205 PLPPR3Q6T4P5 718 aa24.21■■□□□ 1.47
SUMO1-205ENST00000409205 MSH5O43196 834 aa24.08■■□□□ 1.45
SUMO1-205ENST00000409205 PIAS4Q8N2W9 510 aaPredicted RBP23.86■■□□□ 1.41
SUMO1-205ENST00000409205 PPP6R1Q9UPN7 881 aa23.79■■□□□ 1.4
SUMO1-205ENST00000409205 POTEDQ86YR6 584 aa23.76■■□□□ 1.39
SUMO1-205ENST00000409205 ADRA2BP18089 450 aa23.69■■□□□ 1.38
SUMO1-205ENST00000409205 MAPK8IP2Q13387 824 aaPredicted RBP21.81■■□□□ 1.08
SUMO1-205ENST00000409205 SCAF1Q9H7N4 1312 aaKnown RBP21.78■■□□□ 1.08
SUMO1-205ENST00000409205 DMRT2Q9Y5R5 561 aa21.76■■□□□ 1.07
SUMO1-205ENST00000409205 PPP4R3CPQ6ZMV5 832 aa21.17■□□□□ 0.98
SUMO1-205ENST00000409205 HOXD11P31277 338 aaPredicted RBP20.93■□□□□ 0.94
SUMO1-205ENST00000409205 CNKSR2Q8WXI2 1034 aa20.85■□□□□ 0.93
SUMO1-205ENST00000409205 DCAF8L1A6NGE4 600 aa20.79■□□□□ 0.92
SUMO1-205ENST00000409205 CACNB1Q02641 598 aaPredicted RBP20.73■□□□□ 0.91
SUMO1-205ENST00000409205 RNF216Q9NWF9 866 aaPredicted RBP20.72■□□□□ 0.91
SUMO1-205ENST00000409205 RNF39Q9H2S5 420 aa20.52■□□□□ 0.88
SUMO1-205ENST00000409205 NCBP3Q53F19 620 aaKnown RBP20.34■□□□□ 0.85
SUMO1-205ENST00000409205 DNAJC5BQ9UF47 199 aa20.33■□□□□ 0.85
SUMO1-205ENST00000409205 C1QBPQ07021 282 aaKnown RBP20.24■□□□□ 0.83
SUMO1-205ENST00000409205 NPM3O75607 178 aaKnown RBP19.99■□□□□ 0.79
SUMO1-205ENST00000409205 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.88■□□□□ 0.77
SUMO1-205ENST00000409205 U3KPZ7 1027 aaPredicted RBP19.44■□□□□ 0.7
SUMO1-205ENST00000409205 KCNA4P22459 653 aa19.42■□□□□ 0.7
SUMO1-205ENST00000409205 SPINK5Q9NQ38 1064 aaPredicted RBP19.18■□□□□ 0.66
SUMO1-205ENST00000409205 CAPN15O75808 1086 aa19.17■□□□□ 0.66
SUMO1-205ENST00000409205 SLC4A2P04920 1241 aa19.15■□□□□ 0.66
SUMO1-205ENST00000409205 DSG3P32926 999 aa19.14■□□□□ 0.65
SUMO1-205ENST00000409205 APLP2Q06481 763 aa18.95■□□□□ 0.62
SUMO1-205ENST00000409205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.9■□□□□ 0.62
SUMO1-205ENST00000409205 HNRNPUL2Q1KMD3 747 aaKnown RBP18.9■□□□□ 0.62
SUMO1-205ENST00000409205 ZNF219Q9P2Y4 722 aaPredicted RBP18.83■□□□□ 0.6
SUMO1-205ENST00000409205 TRHP20396 242 aaPredicted RBP18.8■□□□□ 0.6
SUMO1-205ENST00000409205 SAMD1Q6SPF0 538 aaPredicted RBP18.76■□□□□ 0.59
SUMO1-205ENST00000409205 ABCB7O75027 752 aa18.67■□□□□ 0.58
SUMO1-205ENST00000409205 POTEHQ6S545 545 aa18.59■□□□□ 0.57
SUMO1-205ENST00000409205 MYCNP04198 464 aaPredicted RBP18.52■□□□□ 0.56
SUMO1-205ENST00000409205 SLC4A1APQ9BWU0 796 aaKnown RBP18.31■□□□□ 0.52
SUMO1-205ENST00000409205 POLA2Q14181 598 aa18.3■□□□□ 0.52
SUMO1-205ENST00000409205 RBM42Q9BTD8 480 aaKnown RBP18.3■□□□□ 0.52
SUMO1-205ENST00000409205 FOXD4L1Q9NU39 408 aa18.22■□□□□ 0.51
SUMO1-205ENST00000409205 ATF5Q9Y2D1 282 aaPredicted RBP18.05■□□□□ 0.48
SUMO1-205ENST00000409205 ZBTB12Q9Y330 459 aaPredicted RBP17.96■□□□□ 0.47
SUMO1-205ENST00000409205 CHRDL2Q6WN34 429 aa17.93■□□□□ 0.46
SUMO1-205ENST00000409205 AKT1S1Q96B36 256 aa17.85■□□□□ 0.45
SUMO1-205ENST00000409205 ZBTB22O15209 634 aa17.84■□□□□ 0.45
SUMO1-205ENST00000409205 ATXN8OSP0DMR3 200 aa17.75■□□□□ 0.43
SUMO1-205ENST00000409205 OSCARQ8IYS5 282 aa17.66■□□□□ 0.42
SUMO1-205ENST00000409205 REM2Q8IYK8 340 aaPredicted RBP17.64■□□□□ 0.41
SUMO1-205ENST00000409205 PIP4P2Q8N4L2 257 aa17.46■□□□□ 0.39
SUMO1-205ENST00000409205 PITPNM1O00562 1244 aa17.42■□□□□ 0.38
SUMO1-205ENST00000409205 FBLN2P98095 1184 aa17.41■□□□□ 0.38
SUMO1-205ENST00000409205 SPDYE2BA6NHP3 402 aa17.39■□□□□ 0.37
SUMO1-205ENST00000409205 SPDYE6P0CI01 402 aa17.39■□□□□ 0.37
SUMO1-205ENST00000409205 SPDYE2Q495Y8 402 aa17.39■□□□□ 0.37
SUMO1-205ENST00000409205 FXR2P51116 673 aaKnown RBP eCLIP17.37■□□□□ 0.37
SUMO1-205ENST00000409205 SP7Q8TDD2 431 aaPredicted RBP17.34■□□□□ 0.37
SUMO1-205ENST00000409205 MKRN4PQ13434 485 aaPredicted RBP17.23■□□□□ 0.35
SUMO1-205ENST00000409205 HAX1O00165 279 aa17.19■□□□□ 0.34
SUMO1-205ENST00000409205 SSUH2Q9Y2M2 353 aa17.12■□□□□ 0.33
SUMO1-205ENST00000409205 SPDYE1Q8NFV5 336 aaPredicted RBP17.11■□□□□ 0.33
SUMO1-205ENST00000409205 ZNF692Q9BU19 519 aaPredicted RBP17.11■□□□□ 0.33
SUMO1-205ENST00000409205 CLEC11AQ9Y240 323 aa17.03■□□□□ 0.32
SUMO1-205ENST00000409205 PRKAR2AP13861 404 aaKnown RBP16.98■□□□□ 0.31
SUMO1-205ENST00000409205 EVX2Q03828 476 aa16.94■□□□□ 0.3
SUMO1-205ENST00000409205 CSRNP3Q8WYN3 585 aa16.89■□□□□ 0.29
SUMO1-205ENST00000409205 PABPN1Q86U42 306 aaKnown RBP eCLIP16.84■□□□□ 0.29
SUMO1-205ENST00000409205 C19orf67A6NJJ6 358 aa16.81■□□□□ 0.28
SUMO1-205ENST00000409205 PRR29P0C7W0 189 aa16.78■□□□□ 0.28
SUMO1-205ENST00000409205 CHADLQ6NUI6 762 aa16.71■□□□□ 0.27
SUMO1-205ENST00000409205 GABBR2O75899 941 aa16.59■□□□□ 0.25
SUMO1-205ENST00000409205 FARP1Q9Y4F1 1045 aaPredicted RBP16.51■□□□□ 0.23
SUMO1-205ENST00000409205 EHMT2Q96KQ7 1210 aa16.48■□□□□ 0.23
SUMO1-205ENST00000409205 CD44P16070 742 aaKnown RBP16.43■□□□□ 0.22
SUMO1-205ENST00000409205 STAG3Q9UJ98 1225 aa16.42■□□□□ 0.22
SUMO1-205ENST00000409205 CLCN6P51797 869 aa16.39■□□□□ 0.21
SUMO1-205ENST00000409205 SPDYE4A6NLX3 237 aa16.34■□□□□ 0.21
SUMO1-205ENST00000409205 CREBZFQ9NS37 354 aa16.31■□□□□ 0.2
SUMO1-205ENST00000409205 LHX8Q68G74 356 aa16.27■□□□□ 0.2
SUMO1-205ENST00000409205 POTEIP0CG38 1075 aa16.22■□□□□ 0.19
SUMO1-205ENST00000409205 ZNF579Q8NAF0 562 aaKnown RBP16.2■□□□□ 0.18
SUMO1-205ENST00000409205 ZRANB1Q9UGI0 708 aa16.17■□□□□ 0.18
SUMO1-205ENST00000409205 DCBLD2Q96PD2 775 aa16.1■□□□□ 0.17
SUMO1-205ENST00000409205 NPM1P06748 294 aaKnown RBP eCLIP16.04■□□□□ 0.16
SUMO1-205ENST00000409205 PAK3O75914 559 aaPredicted RBP16.02■□□□□ 0.16
SUMO1-205ENST00000409205 MNX1P50219 401 aaPredicted RBP16.02■□□□□ 0.16
SUMO1-205ENST00000409205 GALR2O43603 387 aaPredicted RBP15.97■□□□□ 0.15
SUMO1-205ENST00000409205 PROM2Q8N271 834 aa15.97■□□□□ 0.15
SUMO1-205ENST00000409205 PHF12Q96QT6 1004 aa15.89■□□□□ 0.13
SUMO1-205ENST00000409205 ASTLQ6HA08 431 aaPredicted RBP15.69■□□□□ 0.1
SUMO1-205ENST00000409205 PELP1Q8IZL8 1130 aaKnown RBP15.69■□□□□ 0.1
SUMO1-205ENST00000409205 MS4A3Q96HJ5 214 aa15.69■□□□□ 0.1
SUMO1-205ENST00000409205 POTEB2H3BUK9 544 aa15.68■□□□□ 0.1
SUMO1-205ENST00000409205 OTUD5Q96G74 571 aa15.67■□□□□ 0.1
SUMO1-205ENST00000409205 TSPYL2Q9H2G4 693 aaPredicted RBP15.66■□□□□ 0.1
SUMO1-205ENST00000409205 CCDC61Q9Y6R9 512 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms