RNA–Protein interactions for RNA: ENST00000407180.1

RAP1BP3-201, Transcript of RAP1B, member of RAS oncogene family pseudogene 3, humanhuman

BASIC

Gene RAP1BP3, Length 549 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1BP3-201ENST00000407180 AEBP2Q6ZN18 517 aaPredicted RBP30.98■■■□□ 2.55
RAP1BP3-201ENST00000407180 CHIC1Q5VXU3 224 aa29.01■■■□□ 2.23
RAP1BP3-201ENST00000407180 SENP3Q9H4L4 574 aaPredicted RBP26.39■■□□□ 1.82
RAP1BP3-201ENST00000407180 PHF23Q9BUL5 403 aaPredicted RBP26.01■■□□□ 1.75
RAP1BP3-201ENST00000407180 FOXD1Q16676 465 aa24.69■■□□□ 1.54
RAP1BP3-201ENST00000407180 POTEDQ86YR6 584 aa23.67■■□□□ 1.38
RAP1BP3-201ENST00000407180 MSH5O43196 834 aa23.19■■□□□ 1.3
RAP1BP3-201ENST00000407180 PLPPR3Q6T4P5 718 aa22.96■■□□□ 1.27
RAP1BP3-201ENST00000407180 PIAS4Q8N2W9 510 aaPredicted RBP22.94■■□□□ 1.26
RAP1BP3-201ENST00000407180 PPP6R1Q9UPN7 881 aa22.82■■□□□ 1.24
RAP1BP3-201ENST00000407180 ADRA2BP18089 450 aa22.69■■□□□ 1.22
RAP1BP3-201ENST00000407180 MAPK8IP2Q13387 824 aaPredicted RBP20.96■□□□□ 0.95
RAP1BP3-201ENST00000407180 DMRT2Q9Y5R5 561 aa20.9■□□□□ 0.94
RAP1BP3-201ENST00000407180 SCAF1Q9H7N4 1312 aaKnown RBP20.65■□□□□ 0.9
RAP1BP3-201ENST00000407180 CACNB1Q02641 598 aaPredicted RBP20.21■□□□□ 0.83
RAP1BP3-201ENST00000407180 PPP4R3CPQ6ZMV5 832 aa20.09■□□□□ 0.81
RAP1BP3-201ENST00000407180 HOXD11P31277 338 aaPredicted RBP20.01■□□□□ 0.79
RAP1BP3-201ENST00000407180 DCAF8L1A6NGE4 600 aa19.96■□□□□ 0.79
RAP1BP3-201ENST00000407180 RNF39Q9H2S5 420 aa19.81■□□□□ 0.76
RAP1BP3-201ENST00000407180 CNKSR2Q8WXI2 1034 aa19.79■□□□□ 0.76
RAP1BP3-201ENST00000407180 RNF216Q9NWF9 866 aaPredicted RBP19.72■□□□□ 0.75
RAP1BP3-201ENST00000407180 C1QBPQ07021 282 aaKnown RBP19.45■□□□□ 0.7
RAP1BP3-201ENST00000407180 DNAJC5BQ9UF47 199 aa19.38■□□□□ 0.69
RAP1BP3-201ENST00000407180 NCBP3Q53F19 620 aaKnown RBP19.13■□□□□ 0.65
RAP1BP3-201ENST00000407180 NPM3O75607 178 aaKnown RBP18.96■□□□□ 0.63
RAP1BP3-201ENST00000407180 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.96■□□□□ 0.63
RAP1BP3-201ENST00000407180 U3KPZ7 1027 aaPredicted RBP18.63■□□□□ 0.57
RAP1BP3-201ENST00000407180 SPINK5Q9NQ38 1064 aaPredicted RBP18.45■□□□□ 0.54
RAP1BP3-201ENST00000407180 DSG3P32926 999 aa18.41■□□□□ 0.54
RAP1BP3-201ENST00000407180 POTEHQ6S545 545 aa18.41■□□□□ 0.54
RAP1BP3-201ENST00000407180 CAPN15O75808 1086 aa18.36■□□□□ 0.53
RAP1BP3-201ENST00000407180 KCNA4P22459 653 aa18.27■□□□□ 0.52
RAP1BP3-201ENST00000407180 SLC4A2P04920 1241 aa18.24■□□□□ 0.51
RAP1BP3-201ENST00000407180 TRHP20396 242 aaPredicted RBP17.98■□□□□ 0.47
RAP1BP3-201ENST00000407180 ABCB7O75027 752 aa17.95■□□□□ 0.46
RAP1BP3-201ENST00000407180 ZNF219Q9P2Y4 722 aaPredicted RBP17.95■□□□□ 0.46
RAP1BP3-201ENST00000407180 APLP2Q06481 763 aa17.93■□□□□ 0.46
RAP1BP3-201ENST00000407180 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.85■□□□□ 0.45
RAP1BP3-201ENST00000407180 HNRNPUL2Q1KMD3 747 aaKnown RBP17.85■□□□□ 0.45
RAP1BP3-201ENST00000407180 SAMD1Q6SPF0 538 aaPredicted RBP17.76■□□□□ 0.43
RAP1BP3-201ENST00000407180 MYCNP04198 464 aaPredicted RBP17.51■□□□□ 0.39
RAP1BP3-201ENST00000407180 RBM42Q9BTD8 480 aaKnown RBP17.51■□□□□ 0.39
RAP1BP3-201ENST00000407180 POLA2Q14181 598 aa17.43■□□□□ 0.38
RAP1BP3-201ENST00000407180 CHRDL2Q6WN34 429 aa17.32■□□□□ 0.36
RAP1BP3-201ENST00000407180 ATF5Q9Y2D1 282 aaPredicted RBP17.2■□□□□ 0.34
RAP1BP3-201ENST00000407180 FOXD4L1Q9NU39 408 aa17.14■□□□□ 0.33
RAP1BP3-201ENST00000407180 SLC4A1APQ9BWU0 796 aaKnown RBP17.12■□□□□ 0.33
RAP1BP3-201ENST00000407180 AKT1S1Q96B36 256 aa17.06■□□□□ 0.32
RAP1BP3-201ENST00000407180 ZBTB12Q9Y330 459 aaPredicted RBP17.02■□□□□ 0.32
RAP1BP3-201ENST00000407180 SP7Q8TDD2 431 aaPredicted RBP16.96■□□□□ 0.31
RAP1BP3-201ENST00000407180 OSCARQ8IYS5 282 aa16.94■□□□□ 0.3
RAP1BP3-201ENST00000407180 REM2Q8IYK8 340 aaPredicted RBP16.91■□□□□ 0.3
RAP1BP3-201ENST00000407180 ZBTB22O15209 634 aa16.85■□□□□ 0.29
RAP1BP3-201ENST00000407180 PIP4P2Q8N4L2 257 aa16.85■□□□□ 0.29
RAP1BP3-201ENST00000407180 PITPNM1O00562 1244 aa16.77■□□□□ 0.28
RAP1BP3-201ENST00000407180 FXR2P51116 673 aaKnown RBP eCLIP16.69■□□□□ 0.26
RAP1BP3-201ENST00000407180 ATXN8OSP0DMR3 200 aa16.63■□□□□ 0.25
RAP1BP3-201ENST00000407180 HAX1O00165 279 aa16.56■□□□□ 0.24
RAP1BP3-201ENST00000407180 SPDYE2BA6NHP3 402 aa16.5■□□□□ 0.23
RAP1BP3-201ENST00000407180 SPDYE6P0CI01 402 aa16.5■□□□□ 0.23
RAP1BP3-201ENST00000407180 SPDYE2Q495Y8 402 aa16.5■□□□□ 0.23
RAP1BP3-201ENST00000407180 EVX2Q03828 476 aa16.44■□□□□ 0.22
RAP1BP3-201ENST00000407180 FBLN2P98095 1184 aa16.42■□□□□ 0.22
RAP1BP3-201ENST00000407180 MKRN4PQ13434 485 aaPredicted RBP16.39■□□□□ 0.21
RAP1BP3-201ENST00000407180 SSUH2Q9Y2M2 353 aa16.3■□□□□ 0.2
RAP1BP3-201ENST00000407180 PRKAR2AP13861 404 aaKnown RBP16.28■□□□□ 0.2
RAP1BP3-201ENST00000407180 SPDYE1Q8NFV5 336 aaPredicted RBP16.28■□□□□ 0.2
RAP1BP3-201ENST00000407180 CLEC11AQ9Y240 323 aa16.25■□□□□ 0.19
RAP1BP3-201ENST00000407180 ZNF692Q9BU19 519 aaPredicted RBP16.21■□□□□ 0.19
RAP1BP3-201ENST00000407180 C19orf67A6NJJ6 358 aa16.17■□□□□ 0.18
RAP1BP3-201ENST00000407180 CHADLQ6NUI6 762 aa16.05■□□□□ 0.16
RAP1BP3-201ENST00000407180 GABBR2O75899 941 aa16.01■□□□□ 0.15
RAP1BP3-201ENST00000407180 PABPN1Q86U42 306 aaKnown RBP eCLIP15.98■□□□□ 0.15
RAP1BP3-201ENST00000407180 PRR29P0C7W0 189 aa15.93■□□□□ 0.14
RAP1BP3-201ENST00000407180 LHX8Q68G74 356 aa15.89■□□□□ 0.13
RAP1BP3-201ENST00000407180 FARP1Q9Y4F1 1045 aaPredicted RBP15.76■□□□□ 0.11
RAP1BP3-201ENST00000407180 CD44P16070 742 aaKnown RBP15.74■□□□□ 0.11
RAP1BP3-201ENST00000407180 POTEIP0CG38 1075 aa15.72■□□□□ 0.11
RAP1BP3-201ENST00000407180 CSRNP3Q8WYN3 585 aa15.68■□□□□ 0.1
RAP1BP3-201ENST00000407180 CLCN6P51797 869 aa15.56■□□□□ 0.08
RAP1BP3-201ENST00000407180 CREBZFQ9NS37 354 aa15.53■□□□□ 0.08
RAP1BP3-201ENST00000407180 ZNF579Q8NAF0 562 aaKnown RBP15.52■□□□□ 0.08
RAP1BP3-201ENST00000407180 ZRANB1Q9UGI0 708 aa15.45■□□□□ 0.06
RAP1BP3-201ENST00000407180 DCBLD2Q96PD2 775 aa15.42■□□□□ 0.06
RAP1BP3-201ENST00000407180 STAG3Q9UJ98 1225 aa15.42■□□□□ 0.06
RAP1BP3-201ENST00000407180 PLSCR2Q9NRY7 297 aa15.38■□□□□ 0.05
RAP1BP3-201ENST00000407180 GALR2O43603 387 aaPredicted RBP15.36■□□□□ 0.05
RAP1BP3-201ENST00000407180 SPDYE4A6NLX3 237 aa15.35■□□□□ 0.05
RAP1BP3-201ENST00000407180 MNX1P50219 401 aaPredicted RBP15.26■□□□□ 0.03
RAP1BP3-201ENST00000407180 PHF12Q96QT6 1004 aa15.25■□□□□ 0.03
RAP1BP3-201ENST00000407180 EHMT2Q96KQ7 1210 aa15.22■□□□□ 0.03
RAP1BP3-201ENST00000407180 POTEB2H3BUK9 544 aa15.19■□□□□ 0.02
RAP1BP3-201ENST00000407180 PAK3O75914 559 aaPredicted RBP15.18■□□□□ 0.02
RAP1BP3-201ENST00000407180 OTUD5Q96G74 571 aa15.18■□□□□ 0.02
RAP1BP3-201ENST00000407180 NPM1P06748 294 aaKnown RBP eCLIP15.13■□□□□ 0.01
RAP1BP3-201ENST00000407180 PELP1Q8IZL8 1130 aaKnown RBP15.12■□□□□ 0.01
RAP1BP3-201ENST00000407180 MS4A3Q96HJ5 214 aa15.04■□□□□ -0
RAP1BP3-201ENST00000407180 ASTLQ6HA08 431 aaPredicted RBP15.03■□□□□ -0
RAP1BP3-201ENST00000407180 PROM2Q8N271 834 aa15.02■□□□□ -0
RAP1BP3-201ENST00000407180 POTEMA6NI47 508 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms