RNA–Protein interactions for RNA: ENST00000406076.5

CLHC1-203, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLHC1, Length 1,777 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-203ENST00000406076 AEBP2Q6ZN18 517 aaPredicted RBP18.17■□□□□ 0.5
CLHC1-203ENST00000406076 CHIC1Q5VXU3 224 aa17.3■□□□□ 0.36
CLHC1-203ENST00000406076 SENP3Q9H4L4 574 aaPredicted RBP15.47■□□□□ 0.07
CLHC1-203ENST00000406076 PHF23Q9BUL5 403 aaPredicted RBP15.29■□□□□ 0.04
CLHC1-203ENST00000406076 FOXD1Q16676 465 aa14.42□□□□□ -0.1
CLHC1-203ENST00000406076 PLPPR3Q6T4P5 718 aa13.86□□□□□ -0.19
CLHC1-203ENST00000406076 POTEDQ86YR6 584 aa13.59□□□□□ -0.23
CLHC1-203ENST00000406076 PPP6R1Q9UPN7 881 aa13.56□□□□□ -0.24
CLHC1-203ENST00000406076 ADRA2BP18089 450 aa13.51□□□□□ -0.25
CLHC1-203ENST00000406076 PIAS4Q8N2W9 510 aaPredicted RBP13.5□□□□□ -0.25
CLHC1-203ENST00000406076 MSH5O43196 834 aa13.45□□□□□ -0.26
CLHC1-203ENST00000406076 MAPK8IP2Q13387 824 aaPredicted RBP12.4□□□□□ -0.42
CLHC1-203ENST00000406076 SCAF1Q9H7N4 1312 aaKnown RBP12.33□□□□□ -0.44
CLHC1-203ENST00000406076 DMRT2Q9Y5R5 561 aa12.28□□□□□ -0.44
CLHC1-203ENST00000406076 PPP4R3CPQ6ZMV5 832 aa12.16□□□□□ -0.46
CLHC1-203ENST00000406076 CNKSR2Q8WXI2 1034 aa11.91□□□□□ -0.5
CLHC1-203ENST00000406076 HOXD11P31277 338 aaPredicted RBP11.85□□□□□ -0.51
CLHC1-203ENST00000406076 DCAF8L1A6NGE4 600 aa11.79□□□□□ -0.52
CLHC1-203ENST00000406076 RNF216Q9NWF9 866 aaPredicted RBP11.79□□□□□ -0.52
CLHC1-203ENST00000406076 NCBP3Q53F19 620 aaKnown RBP11.69□□□□□ -0.54
CLHC1-203ENST00000406076 NPM3O75607 178 aaKnown RBP11.55□□□□□ -0.56
CLHC1-203ENST00000406076 CACNB1Q02641 598 aaPredicted RBP11.51□□□□□ -0.57
CLHC1-203ENST00000406076 RNF39Q9H2S5 420 aa11.5□□□□□ -0.57
CLHC1-203ENST00000406076 KCNA4P22459 653 aa11.41□□□□□ -0.58
CLHC1-203ENST00000406076 DNAJC5BQ9UF47 199 aa11.41□□□□□ -0.58
CLHC1-203ENST00000406076 C1QBPQ07021 282 aaKnown RBP11.33□□□□□ -0.6
CLHC1-203ENST00000406076 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.31□□□□□ -0.6
CLHC1-203ENST00000406076 U3KPZ7 1027 aaPredicted RBP11.08□□□□□ -0.64
CLHC1-203ENST00000406076 SLC4A2P04920 1241 aa11.02□□□□□ -0.65
CLHC1-203ENST00000406076 SLC24A1O60721 1099 aa10.95□□□□□ -0.66
CLHC1-203ENST00000406076 SPINK5Q9NQ38 1064 aaPredicted RBP10.91□□□□□ -0.66
CLHC1-203ENST00000406076 CAPN15O75808 1086 aa10.88□□□□□ -0.67
CLHC1-203ENST00000406076 DSG3P32926 999 aa10.8□□□□□ -0.68
CLHC1-203ENST00000406076 EHMT2Q96KQ7 1210 aa10.77□□□□□ -0.68
CLHC1-203ENST00000406076 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.76□□□□□ -0.69
CLHC1-203ENST00000406076 HNRNPUL2Q1KMD3 747 aaKnown RBP10.76□□□□□ -0.69
CLHC1-203ENST00000406076 SLC4A1APQ9BWU0 796 aaKnown RBP10.76□□□□□ -0.69
CLHC1-203ENST00000406076 APLP2Q06481 763 aa10.74□□□□□ -0.69
CLHC1-203ENST00000406076 TRHP20396 242 aaPredicted RBP10.72□□□□□ -0.69
CLHC1-203ENST00000406076 SAMD1Q6SPF0 538 aaPredicted RBP10.71□□□□□ -0.69
CLHC1-203ENST00000406076 ZNF219Q9P2Y4 722 aaPredicted RBP10.68□□□□□ -0.7
CLHC1-203ENST00000406076 MYCNP04198 464 aaPredicted RBP10.67□□□□□ -0.7
CLHC1-203ENST00000406076 ABCB7O75027 752 aa10.65□□□□□ -0.71
CLHC1-203ENST00000406076 FOXD4L1Q9NU39 408 aa10.6□□□□□ -0.71
CLHC1-203ENST00000406076 ZBTB22O15209 634 aa10.49□□□□□ -0.73
CLHC1-203ENST00000406076 POLA2Q14181 598 aa10.45□□□□□ -0.74
CLHC1-203ENST00000406076 ATF5Q9Y2D1 282 aaPredicted RBP10.45□□□□□ -0.74
CLHC1-203ENST00000406076 RBM42Q9BTD8 480 aaKnown RBP10.27□□□□□ -0.77
CLHC1-203ENST00000406076 ATXN8OSP0DMR3 200 aa10.25□□□□□ -0.77
CLHC1-203ENST00000406076 POTEHQ6S545 545 aa10.23□□□□□ -0.77
CLHC1-203ENST00000406076 ZBTB12Q9Y330 459 aaPredicted RBP10.21□□□□□ -0.77
CLHC1-203ENST00000406076 RTN4Q9NQC3 1192 aaKnown RBP10.17□□□□□ -0.78
CLHC1-203ENST00000406076 CSRNP3Q8WYN3 585 aa10.16□□□□□ -0.78
CLHC1-203ENST00000406076 OSCARQ8IYS5 282 aa10.12□□□□□ -0.79
CLHC1-203ENST00000406076 AKT1S1Q96B36 256 aa10.06□□□□□ -0.8
CLHC1-203ENST00000406076 CHRDL2Q6WN34 429 aa10.05□□□□□ -0.8
CLHC1-203ENST00000406076 AMER1Q5JTC6 1135 aaPredicted RBP10.01□□□□□ -0.81
CLHC1-203ENST00000406076 FBLN2P98095 1184 aa10□□□□□ -0.81
CLHC1-203ENST00000406076 REM2Q8IYK8 340 aaPredicted RBP9.98□□□□□ -0.81
CLHC1-203ENST00000406076 MKRN4PQ13434 485 aaPredicted RBP9.96□□□□□ -0.81
CLHC1-203ENST00000406076 NISCHQ9Y2I1 1504 aa9.92□□□□□ -0.82
CLHC1-203ENST00000406076 SPDYE2BA6NHP3 402 aa9.91□□□□□ -0.82
CLHC1-203ENST00000406076 SPDYE6P0CI01 402 aa9.91□□□□□ -0.82
CLHC1-203ENST00000406076 SPDYE2Q495Y8 402 aa9.91□□□□□ -0.82
CLHC1-203ENST00000406076 PITPNM1O00562 1244 aa9.88□□□□□ -0.83
CLHC1-203ENST00000406076 PIP4P2Q8N4L2 257 aa9.83□□□□□ -0.84
CLHC1-203ENST00000406076 ZNF692Q9BU19 519 aaPredicted RBP9.82□□□□□ -0.84
CLHC1-203ENST00000406076 SSUH2Q9Y2M2 353 aa9.8□□□□□ -0.84
CLHC1-203ENST00000406076 FXR2P51116 673 aaKnown RBP eCLIP9.77□□□□□ -0.85
CLHC1-203ENST00000406076 SPDYE1Q8NFV5 336 aaPredicted RBP9.73□□□□□ -0.85
CLHC1-203ENST00000406076 CLEC11AQ9Y240 323 aa9.73□□□□□ -0.85
CLHC1-203ENST00000406076 ABCC9O60706 1549 aa9.7□□□□□ -0.86
CLHC1-203ENST00000406076 PABPN1Q86U42 306 aaKnown RBP eCLIP9.68□□□□□ -0.86
CLHC1-203ENST00000406076 HAX1O00165 279 aa9.63□□□□□ -0.87
CLHC1-203ENST00000406076 PRKAR2AP13861 404 aaKnown RBP9.63□□□□□ -0.87
CLHC1-203ENST00000406076 SP7Q8TDD2 431 aaPredicted RBP9.62□□□□□ -0.87
CLHC1-203ENST00000406076 DAXXQ9UER7 740 aaPredicted RBP9.62□□□□□ -0.87
CLHC1-203ENST00000406076 PRR29P0C7W0 189 aa9.57□□□□□ -0.88
CLHC1-203ENST00000406076 PRKCSHP14314 528 aaPredicted RBP9.56□□□□□ -0.88
CLHC1-203ENST00000406076 CHADLQ6NUI6 762 aa9.54□□□□□ -0.88
CLHC1-203ENST00000406076 EVX2Q03828 476 aa9.53□□□□□ -0.88
CLHC1-203ENST00000406076 SPDYE4A6NLX3 237 aa9.52□□□□□ -0.89
CLHC1-203ENST00000406076 C19orf67A6NJJ6 358 aa9.45□□□□□ -0.9
CLHC1-203ENST00000406076 PLSCR2Q9NRY7 297 aa9.43□□□□□ -0.9
CLHC1-203ENST00000406076 STAG3Q9UJ98 1225 aa9.4□□□□□ -0.9
CLHC1-203ENST00000406076 FARP1Q9Y4F1 1045 aaPredicted RBP9.4□□□□□ -0.91
CLHC1-203ENST00000406076 CREBZFQ9NS37 354 aa9.35□□□□□ -0.91
CLHC1-203ENST00000406076 TAOK2Q9UL54 1235 aa9.33□□□□□ -0.92
CLHC1-203ENST00000406076 CD44P16070 742 aaKnown RBP9.32□□□□□ -0.92
CLHC1-203ENST00000406076 GABBR2O75899 941 aa9.3□□□□□ -0.92
CLHC1-203ENST00000406076 PROM2Q8N271 834 aa9.29□□□□□ -0.92
CLHC1-203ENST00000406076 BCANQ96GW7 911 aa9.27□□□□□ -0.93
CLHC1-203ENST00000406076 ARXQ96QS3 562 aa9.26□□□□□ -0.93
CLHC1-203ENST00000406076 TIMELESSQ9UNS1 1208 aa9.25□□□□□ -0.93
CLHC1-203ENST00000406076 PLCB2Q00722 1185 aa9.22□□□□□ -0.93
CLHC1-203ENST00000406076 DNAJC5Q9H3Z4 198 aa9.21□□□□□ -0.94
CLHC1-203ENST00000406076 MNX1P50219 401 aaPredicted RBP9.2□□□□□ -0.94
CLHC1-203ENST00000406076 ZRANB1Q9UGI0 708 aa9.2□□□□□ -0.94
CLHC1-203ENST00000406076 TPRNQ4KMQ1 711 aa9.17□□□□□ -0.94
CLHC1-203ENST00000406076 ZNF579Q8NAF0 562 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms