RNA–Protein interactions for RNA: ENST00000406040.2

ATF1P1-201, Transcript of activating transcription factor 1 pseudogene 1, humanhuman

BASIC

Gene ATF1P1, Length 927 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P1-201ENST00000406040 AEBP2Q6ZN18 517 aaPredicted RBP22.45■■□□□ 1.18
ATF1P1-201ENST00000406040 CHIC1Q5VXU3 224 aa21.39■■□□□ 1.01
ATF1P1-201ENST00000406040 SENP3Q9H4L4 574 aaPredicted RBP19.11■□□□□ 0.65
ATF1P1-201ENST00000406040 PHF23Q9BUL5 403 aaPredicted RBP18.88■□□□□ 0.61
ATF1P1-201ENST00000406040 FOXD1Q16676 465 aa17.82■□□□□ 0.44
ATF1P1-201ENST00000406040 PLPPR3Q6T4P5 718 aa17.43■□□□□ 0.38
ATF1P1-201ENST00000406040 PPP6R1Q9UPN7 881 aa16.73■□□□□ 0.27
ATF1P1-201ENST00000406040 ADRA2BP18089 450 aa16.67■□□□□ 0.26
ATF1P1-201ENST00000406040 PIAS4Q8N2W9 510 aaPredicted RBP16.65■□□□□ 0.26
ATF1P1-201ENST00000406040 MSH5O43196 834 aa16.63■□□□□ 0.25
ATF1P1-201ENST00000406040 POTEDQ86YR6 584 aa16.1■□□□□ 0.17
ATF1P1-201ENST00000406040 KCNA4P22459 653 aa15.42■□□□□ 0.06
ATF1P1-201ENST00000406040 PPP4R3CPQ6ZMV5 832 aa15.34■□□□□ 0.05
ATF1P1-201ENST00000406040 MAPK8IP2Q13387 824 aaPredicted RBP15.29■□□□□ 0.04
ATF1P1-201ENST00000406040 SCAF1Q9H7N4 1312 aaKnown RBP15.24■□□□□ 0.03
ATF1P1-201ENST00000406040 NCBP3Q53F19 620 aaKnown RBP15.23■□□□□ 0.03
ATF1P1-201ENST00000406040 DMRT2Q9Y5R5 561 aa15.18■□□□□ 0.02
ATF1P1-201ENST00000406040 CNKSR2Q8WXI2 1034 aa14.89□□□□□ -0.03
ATF1P1-201ENST00000406040 SLC4A1APQ9BWU0 796 aaKnown RBP14.86□□□□□ -0.03
ATF1P1-201ENST00000406040 EHMT2Q96KQ7 1210 aa14.84□□□□□ -0.03
ATF1P1-201ENST00000406040 NPM3O75607 178 aaKnown RBP14.81□□□□□ -0.04
ATF1P1-201ENST00000406040 HOXD11P31277 338 aaPredicted RBP14.66□□□□□ -0.06
ATF1P1-201ENST00000406040 RNF216Q9NWF9 866 aaPredicted RBP14.56□□□□□ -0.08
ATF1P1-201ENST00000406040 DCAF8L1A6NGE4 600 aa14.53□□□□□ -0.08
ATF1P1-201ENST00000406040 DNAJC5BQ9UF47 199 aa14.52□□□□□ -0.09
ATF1P1-201ENST00000406040 CSRNP3Q8WYN3 585 aa14.51□□□□□ -0.09
ATF1P1-201ENST00000406040 CACNB1Q02641 598 aaPredicted RBP14.21□□□□□ -0.13
ATF1P1-201ENST00000406040 RNF39Q9H2S5 420 aa14.21□□□□□ -0.13
ATF1P1-201ENST00000406040 FOXD4L1Q9NU39 408 aa14.17□□□□□ -0.14
ATF1P1-201ENST00000406040 ZBTB22O15209 634 aa14.11□□□□□ -0.15
ATF1P1-201ENST00000406040 C1QBPQ07021 282 aaKnown RBP14□□□□□ -0.17
ATF1P1-201ENST00000406040 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.95□□□□□ -0.18
ATF1P1-201ENST00000406040 SLC4A2P04920 1241 aa13.83□□□□□ -0.2
ATF1P1-201ENST00000406040 MYCNP04198 464 aaPredicted RBP13.78□□□□□ -0.2
ATF1P1-201ENST00000406040 ATXN8OSP0DMR3 200 aa13.76□□□□□ -0.21
ATF1P1-201ENST00000406040 U3KPZ7 1027 aaPredicted RBP13.68□□□□□ -0.22
ATF1P1-201ENST00000406040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.58□□□□□ -0.24
ATF1P1-201ENST00000406040 HNRNPUL2Q1KMD3 747 aaKnown RBP13.58□□□□□ -0.24
ATF1P1-201ENST00000406040 SAMD1Q6SPF0 538 aaPredicted RBP13.49□□□□□ -0.25
ATF1P1-201ENST00000406040 SPINK5Q9NQ38 1064 aaPredicted RBP13.46□□□□□ -0.25
ATF1P1-201ENST00000406040 CAPN15O75808 1086 aa13.41□□□□□ -0.26
ATF1P1-201ENST00000406040 APLP2Q06481 763 aa13.37□□□□□ -0.27
ATF1P1-201ENST00000406040 DSG3P32926 999 aa13.33□□□□□ -0.28
ATF1P1-201ENST00000406040 TRHP20396 242 aaPredicted RBP13.21□□□□□ -0.29
ATF1P1-201ENST00000406040 ZNF219Q9P2Y4 722 aaPredicted RBP13.2□□□□□ -0.3
ATF1P1-201ENST00000406040 ATF5Q9Y2D1 282 aaPredicted RBP13.17□□□□□ -0.3
ATF1P1-201ENST00000406040 ABCB7O75027 752 aa13.12□□□□□ -0.31
ATF1P1-201ENST00000406040 FKBP8Q14318 412 aa13.1□□□□□ -0.31
ATF1P1-201ENST00000406040 POLA2Q14181 598 aa12.89□□□□□ -0.35
ATF1P1-201ENST00000406040 AMER1Q5JTC6 1135 aaPredicted RBP12.88□□□□□ -0.35
ATF1P1-201ENST00000406040 FBLN2P98095 1184 aa12.83□□□□□ -0.36
ATF1P1-201ENST00000406040 ZBTB12Q9Y330 459 aaPredicted RBP12.76□□□□□ -0.37
ATF1P1-201ENST00000406040 FBXO3Q9UK99 471 aa12.72□□□□□ -0.37
ATF1P1-201ENST00000406040 SPDYE4A6NLX3 237 aa12.71□□□□□ -0.37
ATF1P1-201ENST00000406040 RBM42Q9BTD8 480 aaKnown RBP12.7□□□□□ -0.38
ATF1P1-201ENST00000406040 MKRN4PQ13434 485 aaPredicted RBP12.67□□□□□ -0.38
ATF1P1-201ENST00000406040 RTN4Q9NQC3 1192 aaKnown RBP12.67□□□□□ -0.38
ATF1P1-201ENST00000406040 POTEHQ6S545 545 aa12.63□□□□□ -0.39
ATF1P1-201ENST00000406040 PROM2Q8N271 834 aa12.58□□□□□ -0.4
ATF1P1-201ENST00000406040 OSCARQ8IYS5 282 aa12.48□□□□□ -0.41
ATF1P1-201ENST00000406040 AKT1S1Q96B36 256 aa12.44□□□□□ -0.42
ATF1P1-201ENST00000406040 CHRDL2Q6WN34 429 aa12.4□□□□□ -0.42
ATF1P1-201ENST00000406040 SPDYE2BA6NHP3 402 aa12.37□□□□□ -0.43
ATF1P1-201ENST00000406040 SPDYE6P0CI01 402 aa12.37□□□□□ -0.43
ATF1P1-201ENST00000406040 VASPP50552 380 aaPredicted RBP12.37□□□□□ -0.43
ATF1P1-201ENST00000406040 SPDYE2Q495Y8 402 aa12.37□□□□□ -0.43
ATF1P1-201ENST00000406040 ZNF692Q9BU19 519 aaPredicted RBP12.34□□□□□ -0.43
ATF1P1-201ENST00000406040 REM2Q8IYK8 340 aaPredicted RBP12.32□□□□□ -0.44
ATF1P1-201ENST00000406040 SLC24A1O60721 1099 aa12.3□□□□□ -0.44
ATF1P1-201ENST00000406040 STAG3Q9UJ98 1225 aa12.3□□□□□ -0.44
ATF1P1-201ENST00000406040 SSUH2Q9Y2M2 353 aa12.26□□□□□ -0.45
ATF1P1-201ENST00000406040 PITPNM1O00562 1244 aa12.2□□□□□ -0.46
ATF1P1-201ENST00000406040 IFNLR1Q8IU57 520 aaPredicted RBP12.19□□□□□ -0.46
ATF1P1-201ENST00000406040 PABPN1Q86U42 306 aaKnown RBP eCLIP12.15□□□□□ -0.46
ATF1P1-201ENST00000406040 PIP4P2Q8N4L2 257 aa12.13□□□□□ -0.47
ATF1P1-201ENST00000406040 KLHL34Q8N239 644 aa12.1□□□□□ -0.47
ATF1P1-201ENST00000406040 PLEKHG5O94827 1062 aa12.08□□□□□ -0.48
ATF1P1-201ENST00000406040 FXR2P51116 673 aaKnown RBP eCLIP12.08□□□□□ -0.48
ATF1P1-201ENST00000406040 SPOCK2Q92563 424 aa12.08□□□□□ -0.48
ATF1P1-201ENST00000406040 PLCD3Q8N3E9 789 aa12.07□□□□□ -0.48
ATF1P1-201ENST00000406040 ZBTB47Q9UFB7 747 aaPredicted RBP12.05□□□□□ -0.48
ATF1P1-201ENST00000406040 MIER1Q8N108 512 aa12.04□□□□□ -0.48
ATF1P1-201ENST00000406040 SPDYE1Q8NFV5 336 aaPredicted RBP12.01□□□□□ -0.49
ATF1P1-201ENST00000406040 CLEC11AQ9Y240 323 aa11.98□□□□□ -0.49
ATF1P1-201ENST00000406040 PKD2Q13563 968 aa11.96□□□□□ -0.49
ATF1P1-201ENST00000406040 SP7Q8TDD2 431 aaPredicted RBP11.88□□□□□ -0.51
ATF1P1-201ENST00000406040 HAX1O00165 279 aa11.87□□□□□ -0.51
ATF1P1-201ENST00000406040 DCAF8L2P0C7V8 631 aa11.87□□□□□ -0.51
ATF1P1-201ENST00000406040 PRKAR2AP13861 404 aaKnown RBP11.87□□□□□ -0.51
ATF1P1-201ENST00000406040 ECM2O94769 699 aaPredicted RBP11.86□□□□□ -0.51
ATF1P1-201ENST00000406040 TRIM41Q8WV44 630 aa11.85□□□□□ -0.51
ATF1P1-201ENST00000406040 PLCB2Q00722 1185 aa11.83□□□□□ -0.52
ATF1P1-201ENST00000406040 PRR29P0C7W0 189 aa11.8□□□□□ -0.52
ATF1P1-201ENST00000406040 GSE1Q14687 1217 aa11.76□□□□□ -0.53
ATF1P1-201ENST00000406040 CHADLQ6NUI6 762 aa11.76□□□□□ -0.53
ATF1P1-201ENST00000406040 EVX2Q03828 476 aa11.75□□□□□ -0.53
ATF1P1-201ENST00000406040 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.75□□□□□ -0.53
ATF1P1-201ENST00000406040 CIZ1Q9ULV3 898 aaPredicted RBP11.75□□□□□ -0.53
ATF1P1-201ENST00000406040 BBXQ8WY36 941 aaPredicted RBP11.74□□□□□ -0.53
ATF1P1-201ENST00000406040 C19orf67A6NJJ6 358 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms