RNA–Protein interactions for RNA: ENST00000405151.2

RPS4XP9-201, Transcript of ribosomal protein S4X pseudogene 9, humanhuman

BASIC

Gene RPS4XP9, Length 780 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP9-201ENST00000405151 AEBP2Q6ZN18 517 aaPredicted RBP18.21■□□□□ 0.51
RPS4XP9-201ENST00000405151 CHIC1Q5VXU3 224 aa17.63■□□□□ 0.41
RPS4XP9-201ENST00000405151 PHF23Q9BUL5 403 aaPredicted RBP15.54■□□□□ 0.08
RPS4XP9-201ENST00000405151 SENP3Q9H4L4 574 aaPredicted RBP15.37■□□□□ 0.05
RPS4XP9-201ENST00000405151 FOXD1Q16676 465 aa14.35□□□□□ -0.11
RPS4XP9-201ENST00000405151 PLPPR3Q6T4P5 718 aa14.2□□□□□ -0.14
RPS4XP9-201ENST00000405151 PPP6R1Q9UPN7 881 aa13.75□□□□□ -0.21
RPS4XP9-201ENST00000405151 ADRA2BP18089 450 aa13.68□□□□□ -0.22
RPS4XP9-201ENST00000405151 PIAS4Q8N2W9 510 aaPredicted RBP13.43□□□□□ -0.26
RPS4XP9-201ENST00000405151 MSH5O43196 834 aa13.19□□□□□ -0.3
RPS4XP9-201ENST00000405151 PPP4R3CPQ6ZMV5 832 aa12.53□□□□□ -0.4
RPS4XP9-201ENST00000405151 MAPK8IP2Q13387 824 aaPredicted RBP12.47□□□□□ -0.41
RPS4XP9-201ENST00000405151 POTEDQ86YR6 584 aa12.44□□□□□ -0.42
RPS4XP9-201ENST00000405151 SCAF1Q9H7N4 1312 aaKnown RBP12.41□□□□□ -0.42
RPS4XP9-201ENST00000405151 NISCHQ9Y2I1 1504 aa12.28□□□□□ -0.44
RPS4XP9-201ENST00000405151 DMRT2Q9Y5R5 561 aa12.28□□□□□ -0.44
RPS4XP9-201ENST00000405151 CNKSR2Q8WXI2 1034 aa12.19□□□□□ -0.46
RPS4XP9-201ENST00000405151 KCNA4P22459 653 aa12.13□□□□□ -0.47
RPS4XP9-201ENST00000405151 NCBP3Q53F19 620 aaKnown RBP12.09□□□□□ -0.47
RPS4XP9-201ENST00000405151 NPM3O75607 178 aaKnown RBP12.01□□□□□ -0.49
RPS4XP9-201ENST00000405151 HOXD11P31277 338 aaPredicted RBP12.01□□□□□ -0.49
RPS4XP9-201ENST00000405151 RNF216Q9NWF9 866 aaPredicted RBP11.99□□□□□ -0.49
RPS4XP9-201ENST00000405151 DNAJC5BQ9UF47 199 aa11.73□□□□□ -0.53
RPS4XP9-201ENST00000405151 DCAF8L1A6NGE4 600 aa11.66□□□□□ -0.54
RPS4XP9-201ENST00000405151 SLC4A1APQ9BWU0 796 aaKnown RBP11.48□□□□□ -0.57
RPS4XP9-201ENST00000405151 ABCC9O60706 1549 aa11.48□□□□□ -0.57
RPS4XP9-201ENST00000405151 SLC4A2P04920 1241 aa11.41□□□□□ -0.58
RPS4XP9-201ENST00000405151 RNF39Q9H2S5 420 aa11.36□□□□□ -0.59
RPS4XP9-201ENST00000405151 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.35□□□□□ -0.59
RPS4XP9-201ENST00000405151 CCDC180Q9P1Z9 1646 aa11.27□□□□□ -0.6
RPS4XP9-201ENST00000405151 U3KPZ7 1027 aaPredicted RBP11.24□□□□□ -0.61
RPS4XP9-201ENST00000405151 ZBTB22O15209 634 aa11.22□□□□□ -0.61
RPS4XP9-201ENST00000405151 C1QBPQ07021 282 aaKnown RBP11.16□□□□□ -0.62
RPS4XP9-201ENST00000405151 FOXD4L1Q9NU39 408 aa11.16□□□□□ -0.62
RPS4XP9-201ENST00000405151 CACNB1Q02641 598 aaPredicted RBP11.07□□□□□ -0.64
RPS4XP9-201ENST00000405151 MYCNP04198 464 aaPredicted RBP11.05□□□□□ -0.64
RPS4XP9-201ENST00000405151 CSRNP3Q8WYN3 585 aa11.01□□□□□ -0.65
RPS4XP9-201ENST00000405151 EHMT2Q96KQ7 1210 aa11.01□□□□□ -0.65
RPS4XP9-201ENST00000405151 SPINK5Q9NQ38 1064 aaPredicted RBP10.96□□□□□ -0.65
RPS4XP9-201ENST00000405151 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.95□□□□□ -0.66
RPS4XP9-201ENST00000405151 HNRNPUL2Q1KMD3 747 aaKnown RBP10.95□□□□□ -0.66
RPS4XP9-201ENST00000405151 SAMD1Q6SPF0 538 aaPredicted RBP10.93□□□□□ -0.66
RPS4XP9-201ENST00000405151 RB1CC1Q8TDY2 1594 aa10.93□□□□□ -0.66
RPS4XP9-201ENST00000405151 ATF5Q9Y2D1 282 aaPredicted RBP10.85□□□□□ -0.67
RPS4XP9-201ENST00000405151 CAPN15O75808 1086 aa10.84□□□□□ -0.67
RPS4XP9-201ENST00000405151 APLP2Q06481 763 aa10.83□□□□□ -0.68
RPS4XP9-201ENST00000405151 NACADO15069 1562 aa10.79□□□□□ -0.68
RPS4XP9-201ENST00000405151 ATXN8OSP0DMR3 200 aa10.78□□□□□ -0.68
RPS4XP9-201ENST00000405151 TRHP20396 242 aaPredicted RBP10.77□□□□□ -0.69
RPS4XP9-201ENST00000405151 DSG3P32926 999 aa10.76□□□□□ -0.69
RPS4XP9-201ENST00000405151 ZNF219Q9P2Y4 722 aaPredicted RBP10.76□□□□□ -0.69
RPS4XP9-201ENST00000405151 ABCB7O75027 752 aa10.66□□□□□ -0.7
RPS4XP9-201ENST00000405151 DNAJC5Q9H3Z4 198 aa10.65□□□□□ -0.7
RPS4XP9-201ENST00000405151 SHROOM4Q9ULL8 1493 aa10.64□□□□□ -0.71
RPS4XP9-201ENST00000405151 MYO15BQ96JP2 1530 aa10.61□□□□□ -0.71
RPS4XP9-201ENST00000405151 POLA2Q14181 598 aa10.6□□□□□ -0.71
RPS4XP9-201ENST00000405151 PABPN1Q86U42 306 aaKnown RBP eCLIP10.56□□□□□ -0.72
RPS4XP9-201ENST00000405151 CECR2Q9BXF3 1484 aa10.49□□□□□ -0.73
RPS4XP9-201ENST00000405151 BICRAQ9NZM4 1560 aa10.47□□□□□ -0.73
RPS4XP9-201ENST00000405151 UNC13AQ9UPW8 1703 aa10.44□□□□□ -0.74
RPS4XP9-201ENST00000405151 CC2D2AQ9P2K1 1620 aa10.4□□□□□ -0.75
RPS4XP9-201ENST00000405151 DCAF8L2P0C7V8 631 aa10.38□□□□□ -0.75
RPS4XP9-201ENST00000405151 MKRN4PQ13434 485 aaPredicted RBP10.37□□□□□ -0.75
RPS4XP9-201ENST00000405151 ZBTB12Q9Y330 459 aaPredicted RBP10.36□□□□□ -0.75
RPS4XP9-201ENST00000405151 EIF4G1Q04637 1599 aaKnown RBP10.31□□□□□ -0.76
RPS4XP9-201ENST00000405151 CUX2O14529 1486 aa10.29□□□□□ -0.76
RPS4XP9-201ENST00000405151 DCAF1Q9Y4B6 1507 aa10.27□□□□□ -0.77
RPS4XP9-201ENST00000405151 FBLN2P98095 1184 aa10.26□□□□□ -0.77
RPS4XP9-201ENST00000405151 OSCARQ8IYS5 282 aa10.25□□□□□ -0.77
RPS4XP9-201ENST00000405151 RBM42Q9BTD8 480 aaKnown RBP10.17□□□□□ -0.78
RPS4XP9-201ENST00000405151 SPDYE2BA6NHP3 402 aa10.12□□□□□ -0.79
RPS4XP9-201ENST00000405151 SPDYE6P0CI01 402 aa10.12□□□□□ -0.79
RPS4XP9-201ENST00000405151 SPDYE2Q495Y8 402 aa10.12□□□□□ -0.79
RPS4XP9-201ENST00000405151 ZCCHC6Q5VYS8 1495 aaKnown RBP10.1□□□□□ -0.79
RPS4XP9-201ENST00000405151 SCRIBQ14160 1630 aa10.09□□□□□ -0.79
RPS4XP9-201ENST00000405151 SSUH2Q9Y2M2 353 aa10.08□□□□□ -0.8
RPS4XP9-201ENST00000405151 ERCC6Q03468 1493 aa10.07□□□□□ -0.8
RPS4XP9-201ENST00000405151 AKT1S1Q96B36 256 aa10.06□□□□□ -0.8
RPS4XP9-201ENST00000405151 ZNF692Q9BU19 519 aaPredicted RBP10.03□□□□□ -0.8
RPS4XP9-201ENST00000405151 SPDYE4A6NLX3 237 aa10□□□□□ -0.81
RPS4XP9-201ENST00000405151 REM2Q8IYK8 340 aaPredicted RBP9.99□□□□□ -0.81
RPS4XP9-201ENST00000405151 NCAPD3P42695 1498 aa9.94□□□□□ -0.82
RPS4XP9-201ENST00000405151 PROM2Q8N271 834 aa9.91□□□□□ -0.82
RPS4XP9-201ENST00000405151 FKBP8Q14318 412 aa9.9□□□□□ -0.82
RPS4XP9-201ENST00000405151 PITPNM1O00562 1244 aa9.89□□□□□ -0.83
RPS4XP9-201ENST00000405151 TRIM41Q8WV44 630 aa9.86□□□□□ -0.83
RPS4XP9-201ENST00000405151 CHRDL2Q6WN34 429 aa9.85□□□□□ -0.83
RPS4XP9-201ENST00000405151 HMGXB3Q12766 1538 aa9.85□□□□□ -0.83
RPS4XP9-201ENST00000405151 SMARCA2P51531 1590 aa9.83□□□□□ -0.84
RPS4XP9-201ENST00000405151 SPDYE1Q8NFV5 336 aaPredicted RBP9.82□□□□□ -0.84
RPS4XP9-201ENST00000405151 THOC2Q8NI27 1593 aaKnown RBP9.79□□□□□ -0.84
RPS4XP9-201ENST00000405151 LAMC3Q9Y6N6 1575 aa9.79□□□□□ -0.84
RPS4XP9-201ENST00000405151 PDS5BQ9NTI5 1447 aa9.78□□□□□ -0.84
RPS4XP9-201ENST00000405151 ATAD2BQ9ULI0 1458 aa9.78□□□□□ -0.84
RPS4XP9-201ENST00000405151 POTEHQ6S545 545 aa9.76□□□□□ -0.85
RPS4XP9-201ENST00000405151 CLEC11AQ9Y240 323 aa9.76□□□□□ -0.85
RPS4XP9-201ENST00000405151 FXR2P51116 673 aaKnown RBP eCLIP9.73□□□□□ -0.85
RPS4XP9-201ENST00000405151 PIP4P2Q8N4L2 257 aa9.72□□□□□ -0.85
RPS4XP9-201ENST00000405151 NESP48681 1621 aa9.69□□□□□ -0.86
RPS4XP9-201ENST00000405151 STAG3Q9UJ98 1225 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms