RNA–Protein interactions for RNA: ENST00000402690.6

SMAD2-203, Transcript of SMAD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD2, Length 12,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD2-203ENST00000402690 DCAF8L2P0C7V8 631 aa22.04■■□□□ 1.12
SMAD2-203ENST00000402690 PELP1Q8IZL8 1130 aaKnown RBP20.36■□□□□ 0.85
SMAD2-203ENST00000402690 SUPT5HO00267 1087 aaKnown RBP20.31■□□□□ 0.84
SMAD2-203ENST00000402690 EHMT2Q96KQ7 1210 aa20.3■□□□□ 0.84
SMAD2-203ENST00000402690 FAM9AQ8IZU1 332 aaPredicted RBP20.27■□□□□ 0.84
SMAD2-203ENST00000402690 APLP2Q06481 763 aa20.11■□□□□ 0.81
SMAD2-203ENST00000402690 SHROOM4Q9ULL8 1493 aa19.92■□□□□ 0.78
SMAD2-203ENST00000402690 ERICH6Q7L0X2 663 aa19.62■□□□□ 0.73
SMAD2-203ENST00000402690 TTBK1Q5TCY1 1321 aaPredicted RBP19.59■□□□□ 0.73
SMAD2-203ENST00000402690 ATP1B4Q9UN42 357 aaPredicted RBP19.56■□□□□ 0.72
SMAD2-203ENST00000402690 RANGAP1P46060 587 aaPredicted RBP19.5■□□□□ 0.71
SMAD2-203ENST00000402690 CCER1Q8TC90 406 aaPredicted RBP19.47■□□□□ 0.71
SMAD2-203ENST00000402690 NISCHQ9Y2I1 1504 aa19.33■□□□□ 0.68
SMAD2-203ENST00000402690 MYT1LQ9UL68 1186 aa19.19■□□□□ 0.66
SMAD2-203ENST00000402690 PCGF6Q9BYE7 350 aa19.18■□□□□ 0.66
SMAD2-203ENST00000402690 NEFLP07196 543 aa19.05■□□□□ 0.64
SMAD2-203ENST00000402690 CENPBP07199 599 aaPredicted RBP19.03■□□□□ 0.64
SMAD2-203ENST00000402690 UBTFP17480 764 aaKnown RBP18.97■□□□□ 0.63
SMAD2-203ENST00000402690 CHIC1Q5VXU3 224 aa18.9■□□□□ 0.62
SMAD2-203ENST00000402690 DAXXQ9UER7 740 aaPredicted RBP18.88■□□□□ 0.61
SMAD2-203ENST00000402690 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.82■□□□□ 0.6
SMAD2-203ENST00000402690 HNRNPUL2Q1KMD3 747 aaKnown RBP18.82■□□□□ 0.6
SMAD2-203ENST00000402690 TRIM41Q8WV44 630 aa18.81■□□□□ 0.6
SMAD2-203ENST00000402690 POLR3GLQ9BT43 218 aa18.8■□□□□ 0.6
SMAD2-203ENST00000402690 SLC4A1APQ9BWU0 796 aaKnown RBP18.77■□□□□ 0.6
SMAD2-203ENST00000402690 ZEB1P37275 1124 aaPredicted RBP18.77■□□□□ 0.59
SMAD2-203ENST00000402690 YTHDC1Q96MU7 727 aaKnown RBP18.7■□□□□ 0.58
SMAD2-203ENST00000402690 MYT1Q01538 1121 aa18.69■□□□□ 0.58
SMAD2-203ENST00000402690 CNGB1Q14028 1251 aaPredicted RBP18.51■□□□□ 0.55
SMAD2-203ENST00000402690 ITGAEP38570 1179 aa18.5■□□□□ 0.55
SMAD2-203ENST00000402690 PPARGC1BQ86YN6 1023 aaKnown RBP18.4■□□□□ 0.54
SMAD2-203ENST00000402690 ZNF316A6NFI3 1004 aaPredicted RBP18.37■□□□□ 0.53
SMAD2-203ENST00000402690 CLSPNQ9HAW4 1339 aa18.36■□□□□ 0.53
SMAD2-203ENST00000402690 SLC24A1O60721 1099 aa18.28■□□□□ 0.52
SMAD2-203ENST00000402690 BCANQ96GW7 911 aa18.18■□□□□ 0.5
SMAD2-203ENST00000402690 ZBTB47Q9UFB7 747 aaPredicted RBP18.18■□□□□ 0.5
SMAD2-203ENST00000402690 RTL5Q5HYW3 569 aaPredicted RBP18.09■□□□□ 0.49
SMAD2-203ENST00000402690 BCL11AQ9H165 835 aa18.03■□□□□ 0.48
SMAD2-203ENST00000402690 TRIM52Q96A61 297 aa17.98■□□□□ 0.47
SMAD2-203ENST00000402690 FAM50AQ14320 339 aaKnown RBP17.97■□□□□ 0.47
SMAD2-203ENST00000402690 NEFMP07197 916 aa17.92■□□□□ 0.46
SMAD2-203ENST00000402690 TRIM26Q12899 539 aaPredicted RBP17.9■□□□□ 0.46
SMAD2-203ENST00000402690 CANXP27824 592 aaKnown RBP17.9■□□□□ 0.46
SMAD2-203ENST00000402690 FBLN2P98095 1184 aa17.88■□□□□ 0.45
SMAD2-203ENST00000402690 ZNF326Q5BKZ1 582 aaKnown RBP17.84■□□□□ 0.45
SMAD2-203ENST00000402690 PLPPR3Q6T4P5 718 aa17.84■□□□□ 0.45
SMAD2-203ENST00000402690 ESF1Q9H501 851 aaKnown RBP17.82■□□□□ 0.44
SMAD2-203ENST00000402690 NEUROD1Q13562 356 aa17.77■□□□□ 0.44
SMAD2-203ENST00000402690 STAG3Q9UJ98 1225 aa17.66■□□□□ 0.42
SMAD2-203ENST00000402690 HRCP23327 699 aa17.63■□□□□ 0.41
SMAD2-203ENST00000402690 ANP32CO43423 234 aa17.6■□□□□ 0.41
SMAD2-203ENST00000402690 PABPN1Q86U42 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
SMAD2-203ENST00000402690 A0A0G2JS52 829 aa17.56■□□□□ 0.4
SMAD2-203ENST00000402690 SCAF1Q9H7N4 1312 aaKnown RBP17.56■□□□□ 0.4
SMAD2-203ENST00000402690 CDK11AQ9UQ88 783 aaPredicted RBP17.53■□□□□ 0.4
SMAD2-203ENST00000402690 LOC105371045A0A1W2PR82 267 aa17.53■□□□□ 0.4
SMAD2-203ENST00000402690 ARID3CA6NKF2 412 aa17.49■□□□□ 0.39
SMAD2-203ENST00000402690 CHGAP10645 457 aaKnown RBP17.48■□□□□ 0.39
SMAD2-203ENST00000402690 HSP90AA1P07900 732 aaKnown RBP17.48■□□□□ 0.39
SMAD2-203ENST00000402690 DIEXFQ68CQ4 756 aaKnown RBP17.48■□□□□ 0.39
SMAD2-203ENST00000402690 ZNF777Q9ULD5 760 aaPredicted RBP17.46■□□□□ 0.39
SMAD2-203ENST00000402690 ANP32BQ92688 251 aaKnown RBP17.46■□□□□ 0.39
SMAD2-203ENST00000402690 ABCC9O60706 1549 aa17.43■□□□□ 0.38
SMAD2-203ENST00000402690 CDK11BP21127 795 aaKnown RBP17.42■□□□□ 0.38
SMAD2-203ENST00000402690 NPM1P06748 294 aaKnown RBP eCLIP17.39■□□□□ 0.37
SMAD2-203ENST00000402690 NPM2Q86SE8 214 aaKnown RBP17.32■□□□□ 0.36
SMAD2-203ENST00000402690 P3H3Q8IVL6 736 aa17.32■□□□□ 0.36
SMAD2-203ENST00000402690 ANP32AP39687 249 aaKnown RBP17.32■□□□□ 0.36
SMAD2-203ENST00000402690 PLEKHG5O94827 1062 aa17.28■□□□□ 0.36
SMAD2-203ENST00000402690 ZBTB7CA1YPR0 619 aa17.25■□□□□ 0.35
SMAD2-203ENST00000402690 UPF2Q9HAU5 1272 aaKnown RBP17.25■□□□□ 0.35
SMAD2-203ENST00000402690 C14orf37Q86TY3 774 aa17.23■□□□□ 0.35
SMAD2-203ENST00000402690 HAP1P54257 671 aaPredicted RBP17.17■□□□□ 0.34
SMAD2-203ENST00000402690 TULP1O00294 542 aaPredicted RBP17.16■□□□□ 0.34
SMAD2-203ENST00000402690 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.15■□□□□ 0.342e-6■■■□□ 16.4
SMAD2-203ENST00000402690 MYH16Q9H6N6 1097 aa17.1■□□□□ 0.33
SMAD2-203ENST00000402690 ARXQ96QS3 562 aa17.07■□□□□ 0.32
SMAD2-203ENST00000402690 NPHP1O15259 732 aa17.06■□□□□ 0.32
SMAD2-203ENST00000402690 SENP3Q9H4L4 574 aaPredicted RBP17.06■□□□□ 0.32
SMAD2-203ENST00000402690 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.04■□□□□ 0.32
SMAD2-203ENST00000402690 PPP1R15AO75807 674 aaPredicted RBP17.03■□□□□ 0.32
SMAD2-203ENST00000402690 WDR43Q15061 677 aaKnown RBP eCLIP17.02■□□□□ 0.32
SMAD2-203ENST00000402690 SALL2Q9Y467 1007 aaPredicted RBP17.02■□□□□ 0.32
SMAD2-203ENST00000402690 ARID4BQ4LE39 1312 aaPredicted RBP17.01■□□□□ 0.31
SMAD2-203ENST00000402690 EIF5BO60841 1220 aaKnown RBP17.01■□□□□ 0.31
SMAD2-203ENST00000402690 TONSLQ96HA7 1378 aa16.99■□□□□ 0.31
SMAD2-203ENST00000402690 GTF3C3Q9Y5Q9 886 aa16.97■□□□□ 0.31
SMAD2-203ENST00000402690 FAM9BQ8IZU0 186 aa16.92■□□□□ 0.3
SMAD2-203ENST00000402690 KDM2AQ9Y2K7 1162 aa16.91■□□□□ 0.3
SMAD2-203ENST00000402690 NCBP3Q53F19 620 aaKnown RBP16.91■□□□□ 0.3
SMAD2-203ENST00000402690 TMC1Q8TDI8 760 aa16.9■□□□□ 0.3
SMAD2-203ENST00000402690 SCRIBQ14160 1630 aa16.88■□□□□ 0.29
SMAD2-203ENST00000402690 NCLP19338 710 aaKnown RBP16.87■□□□□ 0.29
SMAD2-203ENST00000402690 ZRSR1Q15695 479 aaKnown RBP16.86■□□□□ 0.29
SMAD2-203ENST00000402690 GLIPR1L2Q4G1C9 344 aa16.84■□□□□ 0.29
SMAD2-203ENST00000402690 HNRNPUQ00839 825 aaKnown RBP eCLIP16.83■□□□□ 0.29
SMAD2-203ENST00000402690 CHMP7Q8WUX9 453 aaPredicted RBP16.83■□□□□ 0.29
SMAD2-203ENST00000402690 TSPY4P0CV99 314 aa16.83■□□□□ 0.28
SMAD2-203ENST00000402690 TSPY10P0CW01 314 aa16.83■□□□□ 0.28
SMAD2-203ENST00000402690 CHIC2Q9UKJ5 165 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms