RNA–Protein interactions for RNA: ENST00000401492.1

MRPL42P3-201, Transcript of mitochondrial ribosomal protein L42 pseudogene 3, humanhuman

BASIC

Gene MRPL42P3, Length 326 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42P3-201ENST00000401492 AEBP2Q6ZN18 517 aaPredicted RBP20.22■□□□□ 0.83
MRPL42P3-201ENST00000401492 CHIC1Q5VXU3 224 aa19.15■□□□□ 0.66
MRPL42P3-201ENST00000401492 SENP3Q9H4L4 574 aaPredicted RBP17.25■□□□□ 0.35
MRPL42P3-201ENST00000401492 PHF23Q9BUL5 403 aaPredicted RBP17.02■□□□□ 0.32
MRPL42P3-201ENST00000401492 FOXD1Q16676 465 aa16.09■□□□□ 0.17
MRPL42P3-201ENST00000401492 PLPPR3Q6T4P5 718 aa15.27■□□□□ 0.04
MRPL42P3-201ENST00000401492 MSH5O43196 834 aa15.06■□□□□ 0
MRPL42P3-201ENST00000401492 PIAS4Q8N2W9 510 aaPredicted RBP15.01□□□□□ -0.01
MRPL42P3-201ENST00000401492 PPP6R1Q9UPN7 881 aa15.01□□□□□ -0.01
MRPL42P3-201ENST00000401492 ADRA2BP18089 450 aa14.96□□□□□ -0.01
MRPL42P3-201ENST00000401492 POTEDQ86YR6 584 aa14.8□□□□□ -0.04
MRPL42P3-201ENST00000401492 MAPK8IP2Q13387 824 aaPredicted RBP13.75□□□□□ -0.21
MRPL42P3-201ENST00000401492 SCAF1Q9H7N4 1312 aaKnown RBP13.67□□□□□ -0.22
MRPL42P3-201ENST00000401492 DMRT2Q9Y5R5 561 aa13.67□□□□□ -0.22
MRPL42P3-201ENST00000401492 PPP4R3CPQ6ZMV5 832 aa13.38□□□□□ -0.27
MRPL42P3-201ENST00000401492 HOXD11P31277 338 aaPredicted RBP13.15□□□□□ -0.3
MRPL42P3-201ENST00000401492 CNKSR2Q8WXI2 1034 aa13.14□□□□□ -0.31
MRPL42P3-201ENST00000401492 DCAF8L1A6NGE4 600 aa13.1□□□□□ -0.31
MRPL42P3-201ENST00000401492 RNF216Q9NWF9 866 aaPredicted RBP13.03□□□□□ -0.32
MRPL42P3-201ENST00000401492 CACNB1Q02641 598 aaPredicted RBP12.96□□□□□ -0.33
MRPL42P3-201ENST00000401492 NCBP3Q53F19 620 aaKnown RBP12.85□□□□□ -0.35
MRPL42P3-201ENST00000401492 RNF39Q9H2S5 420 aa12.85□□□□□ -0.35
MRPL42P3-201ENST00000401492 DNAJC5BQ9UF47 199 aa12.71□□□□□ -0.37
MRPL42P3-201ENST00000401492 NPM3O75607 178 aaKnown RBP12.67□□□□□ -0.38
MRPL42P3-201ENST00000401492 C1QBPQ07021 282 aaKnown RBP12.67□□□□□ -0.38
MRPL42P3-201ENST00000401492 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.52□□□□□ -0.41
MRPL42P3-201ENST00000401492 KCNA4P22459 653 aa12.38□□□□□ -0.43
MRPL42P3-201ENST00000401492 U3KPZ7 1027 aaPredicted RBP12.26□□□□□ -0.45
MRPL42P3-201ENST00000401492 SLC4A2P04920 1241 aa12.12□□□□□ -0.47
MRPL42P3-201ENST00000401492 SPINK5Q9NQ38 1064 aaPredicted RBP12.1□□□□□ -0.47
MRPL42P3-201ENST00000401492 CAPN15O75808 1086 aa12.07□□□□□ -0.48
MRPL42P3-201ENST00000401492 DSG3P32926 999 aa12.03□□□□□ -0.48
MRPL42P3-201ENST00000401492 APLP2Q06481 763 aa11.9□□□□□ -0.5
MRPL42P3-201ENST00000401492 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.89□□□□□ -0.51
MRPL42P3-201ENST00000401492 HNRNPUL2Q1KMD3 747 aaKnown RBP11.89□□□□□ -0.51
MRPL42P3-201ENST00000401492 TRHP20396 242 aaPredicted RBP11.88□□□□□ -0.51
MRPL42P3-201ENST00000401492 ZNF219Q9P2Y4 722 aaPredicted RBP11.84□□□□□ -0.51
MRPL42P3-201ENST00000401492 SAMD1Q6SPF0 538 aaPredicted RBP11.81□□□□□ -0.52
MRPL42P3-201ENST00000401492 ABCB7O75027 752 aa11.79□□□□□ -0.52
MRPL42P3-201ENST00000401492 MYCNP04198 464 aaPredicted RBP11.72□□□□□ -0.53
MRPL42P3-201ENST00000401492 SLC4A1APQ9BWU0 796 aaKnown RBP11.67□□□□□ -0.54
MRPL42P3-201ENST00000401492 POTEHQ6S545 545 aa11.58□□□□□ -0.56
MRPL42P3-201ENST00000401492 FOXD4L1Q9NU39 408 aa11.57□□□□□ -0.56
MRPL42P3-201ENST00000401492 POLA2Q14181 598 aa11.54□□□□□ -0.56
MRPL42P3-201ENST00000401492 RBM42Q9BTD8 480 aaKnown RBP11.47□□□□□ -0.57
MRPL42P3-201ENST00000401492 ATF5Q9Y2D1 282 aaPredicted RBP11.45□□□□□ -0.58
MRPL42P3-201ENST00000401492 ZBTB22O15209 634 aa11.38□□□□□ -0.59
MRPL42P3-201ENST00000401492 ZBTB12Q9Y330 459 aaPredicted RBP11.29□□□□□ -0.6
MRPL42P3-201ENST00000401492 CHRDL2Q6WN34 429 aa11.23□□□□□ -0.61
MRPL42P3-201ENST00000401492 ATXN8OSP0DMR3 200 aa11.21□□□□□ -0.61
MRPL42P3-201ENST00000401492 AKT1S1Q96B36 256 aa11.2□□□□□ -0.62
MRPL42P3-201ENST00000401492 OSCARQ8IYS5 282 aa11.17□□□□□ -0.62
MRPL42P3-201ENST00000401492 REM2Q8IYK8 340 aaPredicted RBP11.09□□□□□ -0.63
MRPL42P3-201ENST00000401492 FBLN2P98095 1184 aa11□□□□□ -0.65
MRPL42P3-201ENST00000401492 PITPNM1O00562 1244 aa10.97□□□□□ -0.65
MRPL42P3-201ENST00000401492 SPDYE2BA6NHP3 402 aa10.96□□□□□ -0.65
MRPL42P3-201ENST00000401492 SPDYE6P0CI01 402 aa10.96□□□□□ -0.65
MRPL42P3-201ENST00000401492 SPDYE2Q495Y8 402 aa10.96□□□□□ -0.65
MRPL42P3-201ENST00000401492 PIP4P2Q8N4L2 257 aa10.96□□□□□ -0.65
MRPL42P3-201ENST00000401492 MKRN4PQ13434 485 aaPredicted RBP10.92□□□□□ -0.66
MRPL42P3-201ENST00000401492 FXR2P51116 673 aaKnown RBP eCLIP10.89□□□□□ -0.67
MRPL42P3-201ENST00000401492 SP7Q8TDD2 431 aaPredicted RBP10.84□□□□□ -0.67
MRPL42P3-201ENST00000401492 CSRNP3Q8WYN3 585 aa10.82□□□□□ -0.68
MRPL42P3-201ENST00000401492 ZNF692Q9BU19 519 aaPredicted RBP10.81□□□□□ -0.68
MRPL42P3-201ENST00000401492 SSUH2Q9Y2M2 353 aa10.8□□□□□ -0.68
MRPL42P3-201ENST00000401492 HAX1O00165 279 aa10.78□□□□□ -0.68
MRPL42P3-201ENST00000401492 SPDYE1Q8NFV5 336 aaPredicted RBP10.78□□□□□ -0.68
MRPL42P3-201ENST00000401492 CLEC11AQ9Y240 323 aa10.76□□□□□ -0.69
MRPL42P3-201ENST00000401492 PRKAR2AP13861 404 aaKnown RBP10.69□□□□□ -0.7
MRPL42P3-201ENST00000401492 EVX2Q03828 476 aa10.65□□□□□ -0.7
MRPL42P3-201ENST00000401492 PABPN1Q86U42 306 aaKnown RBP eCLIP10.65□□□□□ -0.7
MRPL42P3-201ENST00000401492 EHMT2Q96KQ7 1210 aa10.62□□□□□ -0.71
MRPL42P3-201ENST00000401492 PRR29P0C7W0 189 aa10.57□□□□□ -0.72
MRPL42P3-201ENST00000401492 CHADLQ6NUI6 762 aa10.56□□□□□ -0.72
MRPL42P3-201ENST00000401492 C19orf67A6NJJ6 358 aa10.54□□□□□ -0.72
MRPL42P3-201ENST00000401492 GABBR2O75899 941 aa10.4□□□□□ -0.74
MRPL42P3-201ENST00000401492 FARP1Q9Y4F1 1045 aaPredicted RBP10.4□□□□□ -0.74
MRPL42P3-201ENST00000401492 SPDYE4A6NLX3 237 aa10.38□□□□□ -0.75
MRPL42P3-201ENST00000401492 STAG3Q9UJ98 1225 aa10.35□□□□□ -0.75
MRPL42P3-201ENST00000401492 CD44P16070 742 aaKnown RBP10.34□□□□□ -0.75
MRPL42P3-201ENST00000401492 CREBZFQ9NS37 354 aa10.3□□□□□ -0.76
MRPL42P3-201ENST00000401492 CLCN6P51797 869 aa10.22□□□□□ -0.77
MRPL42P3-201ENST00000401492 ZRANB1Q9UGI0 708 aa10.2□□□□□ -0.78
MRPL42P3-201ENST00000401492 POTEIP0CG38 1075 aa10.19□□□□□ -0.78
MRPL42P3-201ENST00000401492 ZNF579Q8NAF0 562 aaKnown RBP10.18□□□□□ -0.78
MRPL42P3-201ENST00000401492 LHX8Q68G74 356 aa10.17□□□□□ -0.78
MRPL42P3-201ENST00000401492 MNX1P50219 401 aaPredicted RBP10.12□□□□□ -0.79
MRPL42P3-201ENST00000401492 PROM2Q8N271 834 aa10.12□□□□□ -0.79
MRPL42P3-201ENST00000401492 NPM1P06748 294 aaKnown RBP eCLIP10.11□□□□□ -0.79
MRPL42P3-201ENST00000401492 DCBLD2Q96PD2 775 aa10.11□□□□□ -0.79
MRPL42P3-201ENST00000401492 PAK3O75914 559 aaPredicted RBP10.1□□□□□ -0.79
MRPL42P3-201ENST00000401492 GALR2O43603 387 aaPredicted RBP10.07□□□□□ -0.8
MRPL42P3-201ENST00000401492 PHF12Q96QT6 1004 aa10.04□□□□□ -0.8
MRPL42P3-201ENST00000401492 TSPYL2Q9H2G4 693 aaPredicted RBP9.93□□□□□ -0.82
MRPL42P3-201ENST00000401492 MS4A3Q96HJ5 214 aa9.92□□□□□ -0.82
MRPL42P3-201ENST00000401492 MIER1Q8N108 512 aa9.91□□□□□ -0.82
MRPL42P3-201ENST00000401492 PLEKHG5O94827 1062 aa9.9□□□□□ -0.82
MRPL42P3-201ENST00000401492 CCDC61Q9Y6R9 512 aa9.89□□□□□ -0.83
MRPL42P3-201ENST00000401492 PELP1Q8IZL8 1130 aaKnown RBP9.88□□□□□ -0.83
MRPL42P3-201ENST00000401492 POTEB2H3BUK9 544 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms