RNA–Protein interactions for RNA: ENST00000399543.1

AC025171.2-203, humanhuman

TSL 1 (best)

Gene AC025171.2, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025171.2-203ENST00000399543 NISCHQ9Y2I1 1504 aa27.04■■□□□ 1.92
AC025171.2-203ENST00000399543 SHROOM4Q9ULL8 1493 aa23.01■■□□□ 1.27
AC025171.2-203ENST00000399543 CCDC180Q9P1Z9 1646 aa22.99■■□□□ 1.27
AC025171.2-203ENST00000399543 ZCCHC6Q5VYS8 1495 aaKnown RBP22.9■■□□□ 1.26
AC025171.2-203ENST00000399543 SUPT5HO00267 1087 aaKnown RBP22.59■■□□□ 1.21
AC025171.2-203ENST00000399543 DCAF8L2P0C7V8 631 aa22.26■■□□□ 1.15
AC025171.2-203ENST00000399543 DCAF1Q9Y4B6 1507 aa22.22■■□□□ 1.15
AC025171.2-203ENST00000399543 CHIC1Q5VXU3 224 aa22.04■■□□□ 1.12
AC025171.2-203ENST00000399543 MYO15BQ96JP2 1530 aa22.01■■□□□ 1.11
AC025171.2-203ENST00000399543 ABCC9O60706 1549 aa21.82■■□□□ 1.08
AC025171.2-203ENST00000399543 SCRIBQ14160 1630 aa21.51■■□□□ 1.03
AC025171.2-203ENST00000399543 HRCP23327 699 aa21.48■■□□□ 1.03
AC025171.2-203ENST00000399543 RSF1Q96T23 1441 aaPredicted RBP21.41■■□□□ 1.02
AC025171.2-203ENST00000399543 PCGF6Q9BYE7 350 aa21.39■■□□□ 1.02
AC025171.2-203ENST00000399543 LOC105371045A0A1W2PR82 267 aa21.36■■□□□ 1.01
AC025171.2-203ENST00000399543 RB1CC1Q8TDY2 1594 aa21.22■□□□□ 0.99
AC025171.2-203ENST00000399543 NACADO15069 1562 aa21.21■□□□□ 0.99
AC025171.2-203ENST00000399543 CECR2Q9BXF3 1484 aa21.07■□□□□ 0.96
AC025171.2-203ENST00000399543 TRIM41Q8WV44 630 aa21.05■□□□□ 0.96
AC025171.2-203ENST00000399543 MROH2BQ7Z745 1585 aa21.02■□□□□ 0.96
AC025171.2-203ENST00000399543 TRIM26Q12899 539 aaPredicted RBP20.99■□□□□ 0.95
AC025171.2-203ENST00000399543 PPARGC1BQ86YN6 1023 aaKnown RBP20.99■□□□□ 0.95
AC025171.2-203ENST00000399543 WIZO95785 1651 aa20.92■□□□□ 0.94
AC025171.2-203ENST00000399543 FAM9AQ8IZU1 332 aaPredicted RBP20.85■□□□□ 0.93
AC025171.2-203ENST00000399543 BAZ1AQ9NRL2 1556 aaPredicted RBP20.81■□□□□ 0.92
AC025171.2-203ENST00000399543 EIF4G1Q04637 1599 aaKnown RBP20.72■□□□□ 0.91
AC025171.2-203ENST00000399543 EHMT2Q96KQ7 1210 aa20.64■□□□□ 0.89
AC025171.2-203ENST00000399543 UNC13AQ9UPW8 1703 aa20.6■□□□□ 0.89
AC025171.2-203ENST00000399543 TOP2AP11388 1531 aaKnown RBP20.59■□□□□ 0.89
AC025171.2-203ENST00000399543 SMARCA4P51532 1647 aa20.59■□□□□ 0.89
AC025171.2-203ENST00000399543 ZEB1P37275 1124 aaPredicted RBP20.55■□□□□ 0.88
AC025171.2-203ENST00000399543 SMARCA2P51531 1590 aa20.49■□□□□ 0.87
AC025171.2-203ENST00000399543 CCDC88BA6NC98 1476 aa20.49■□□□□ 0.87
AC025171.2-203ENST00000399543 ABCC8Q09428 1581 aa20.46■□□□□ 0.87
AC025171.2-203ENST00000399543 PABPN1Q86U42 306 aaKnown RBP eCLIP20.38■□□□□ 0.85
AC025171.2-203ENST00000399543 AEBP2Q6ZN18 517 aaPredicted RBP20.32■□□□□ 0.84
AC025171.2-203ENST00000399543 BICRAQ9NZM4 1560 aa20.31■□□□□ 0.84
AC025171.2-203ENST00000399543 DNAJC5BQ9UF47 199 aa20.27■□□□□ 0.84
AC025171.2-203ENST00000399543 SOGA1O94964 1423 aa20.27■□□□□ 0.84
AC025171.2-203ENST00000399543 WRNQ14191 1432 aaPredicted RBP eCLIP20.24■□□□□ 0.83
AC025171.2-203ENST00000399543 PEG3Q9GZU2 1588 aa20.22■□□□□ 0.83
AC025171.2-203ENST00000399543 CEP162Q5TB80 1403 aa20.21■□□□□ 0.83
AC025171.2-203ENST00000399543 EEA1Q15075 1411 aa20.19■□□□□ 0.82
AC025171.2-203ENST00000399543 TNIKQ9UKE5 1360 aa20.17■□□□□ 0.82
AC025171.2-203ENST00000399543 RUSC2Q8N2Y8 1516 aa20.17■□□□□ 0.82
AC025171.2-203ENST00000399543 CSRNP3Q8WYN3 585 aa20.13■□□□□ 0.81
AC025171.2-203ENST00000399543 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.13■□□□□ 0.81
AC025171.2-203ENST00000399543 CCER1Q8TC90 406 aaPredicted RBP20.06■□□□□ 0.8
AC025171.2-203ENST00000399543 GOLGA3Q08378 1498 aa20.05■□□□□ 0.8
AC025171.2-203ENST00000399543 SYNJ1O43426 1573 aa20.03■□□□□ 0.8
AC025171.2-203ENST00000399543 UBTFP17480 764 aaKnown RBP20.03■□□□□ 0.8
AC025171.2-203ENST00000399543 ATAD2BQ9ULI0 1458 aa20.02■□□□□ 0.8
AC025171.2-203ENST00000399543 TTBK1Q5TCY1 1321 aaPredicted RBP20.01■□□□□ 0.79
AC025171.2-203ENST00000399543 BAZ1BQ9UIG0 1483 aaKnown RBP19.96■□□□□ 0.79
AC025171.2-203ENST00000399543 KIF21BO75037 1637 aa19.95■□□□□ 0.78
AC025171.2-203ENST00000399543 CEP164Q9UPV0 1460 aa19.93■□□□□ 0.78
AC025171.2-203ENST00000399543 SCAF1Q9H7N4 1312 aaKnown RBP19.82■□□□□ 0.76
AC025171.2-203ENST00000399543 CLIP1P30622 1438 aa19.81■□□□□ 0.76
AC025171.2-203ENST00000399543 RAPGEF2Q9Y4G8 1499 aa19.79■□□□□ 0.76
AC025171.2-203ENST00000399543 TOP2BQ02880 1626 aa19.78■□□□□ 0.76
AC025171.2-203ENST00000399543 VPS8Q8N3P4 1428 aa19.76■□□□□ 0.75
AC025171.2-203ENST00000399543 BIVM-ERCC5R4GMW8 1640 aa19.72■□□□□ 0.75
AC025171.2-203ENST00000399543 DIEXFQ68CQ4 756 aaKnown RBP19.72■□□□□ 0.75
AC025171.2-203ENST00000399543 CC2D2AQ9P2K1 1620 aa19.71■□□□□ 0.75
AC025171.2-203ENST00000399543 HMGXB3Q12766 1538 aa19.65■□□□□ 0.74
AC025171.2-203ENST00000399543 NCAPD3P42695 1498 aa19.62■□□□□ 0.73
AC025171.2-203ENST00000399543 HNRNPUL2Q1KMD3 747 aaKnown RBP19.62■□□□□ 0.73
AC025171.2-203ENST00000399543 ERICH3Q5RHP9 1530 aa19.61■□□□□ 0.73
AC025171.2-203ENST00000399543 ACIN1Q9UKV3 1341 aaKnown RBP19.6■□□□□ 0.73
AC025171.2-203ENST00000399543 PRXQ9BXM0 1461 aa19.6■□□□□ 0.73
AC025171.2-203ENST00000399543 APLP2Q06481 763 aa19.58■□□□□ 0.72
AC025171.2-203ENST00000399543 NEUROD1Q13562 356 aa19.58■□□□□ 0.72
AC025171.2-203ENST00000399543 RANGAP1P46060 587 aaPredicted RBP19.57■□□□□ 0.72
AC025171.2-203ENST00000399543 CUX1P39880 1505 aa19.57■□□□□ 0.72
AC025171.2-203ENST00000399543 ZNF316A6NFI3 1004 aaPredicted RBP19.56■□□□□ 0.72
AC025171.2-203ENST00000399543 ARAP1Q96P48 1450 aa19.51■□□□□ 0.71
AC025171.2-203ENST00000399543 CFTRP13569 1480 aa19.5■□□□□ 0.71
AC025171.2-203ENST00000399543 KIF27Q86VH2 1401 aa19.47■□□□□ 0.71
AC025171.2-203ENST00000399543 CENPBP07199 599 aaPredicted RBP19.46■□□□□ 0.71
AC025171.2-203ENST00000399543 PELP1Q8IZL8 1130 aaKnown RBP19.44■□□□□ 0.7
AC025171.2-203ENST00000399543 PRDM2Q13029 1718 aa19.39■□□□□ 0.69
AC025171.2-203ENST00000399543 KANK4Q5T7N3 995 aaPredicted RBP19.38■□□□□ 0.69
AC025171.2-203ENST00000399543 GTF3C3Q9Y5Q9 886 aa19.37■□□□□ 0.69
AC025171.2-203ENST00000399543 ARHGAP35Q9NRY4 1499 aa19.33■□□□□ 0.69
AC025171.2-203ENST00000399543 RRBP1Q9P2E9 1410 aaKnown RBP19.32■□□□□ 0.68
AC025171.2-203ENST00000399543 DHX57Q6P158 1386 aaKnown RBP19.32■□□□□ 0.68
AC025171.2-203ENST00000399543 CLSPNQ9HAW4 1339 aa19.31■□□□□ 0.68
AC025171.2-203ENST00000399543 MIER1Q8N108 512 aa19.3■□□□□ 0.68
AC025171.2-203ENST00000399543 CUX2O14529 1486 aa19.26■□□□□ 0.67
AC025171.2-203ENST00000399543 IGF1RP08069 1367 aa19.25■□□□□ 0.67
AC025171.2-203ENST00000399543 CADPSQ9ULU8 1353 aa19.23■□□□□ 0.67
AC025171.2-203ENST00000399543 YTHDC1Q96MU7 727 aaKnown RBP19.22■□□□□ 0.67
AC025171.2-203ENST00000399543 CCNB3Q8WWL7 1395 aa19.21■□□□□ 0.67
AC025171.2-203ENST00000399543 FGD5Q6ZNL6 1462 aa19.19■□□□□ 0.66
AC025171.2-203ENST00000399543 CARMIL1Q5VZK9 1371 aa19.16■□□□□ 0.66
AC025171.2-203ENST00000399543 TIAM1Q13009 1591 aa19.15■□□□□ 0.66
AC025171.2-203ENST00000399543 MAP3K1Q13233 1512 aa19.14■□□□□ 0.65
AC025171.2-203ENST00000399543 LRRC9Q6ZRR7 1453 aa19.06■□□□□ 0.64
AC025171.2-203ENST00000399543 ITGAEP38570 1179 aa19.06■□□□□ 0.64
AC025171.2-203ENST00000399543 FANCD2Q9BXW9 1451 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms