RNA–Protein interactions for RNA: ENST00000399100.6

SEC24B-202, Transcript of SEC24 homolog B, COPII coat complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEC24B, Length 3,780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24B-202ENST00000399100 NISCHQ9Y2I1 1504 aa28.81■■■□□ 2.2
SEC24B-202ENST00000399100 CCDC180Q9P1Z9 1646 aa25■■□□□ 1.59
SEC24B-202ENST00000399100 ZCCHC6Q5VYS8 1495 aaKnown RBP24.49■■□□□ 1.51
SEC24B-202ENST00000399100 DCAF1Q9Y4B6 1507 aa24.05■■□□□ 1.44
SEC24B-202ENST00000399100 MYO15BQ96JP2 1530 aa23.46■■□□□ 1.35
SEC24B-202ENST00000399100 SHROOM4Q9ULL8 1493 aa23.41■■□□□ 1.34
SEC24B-202ENST00000399100 ABCC9O60706 1549 aa23.16■■□□□ 1.3
SEC24B-202ENST00000399100 NACADO15069 1562 aa22.8■■□□□ 1.24
SEC24B-202ENST00000399100 DCAF8L2P0C7V8 631 aa22.79■■□□□ 1.24
SEC24B-202ENST00000399100 SUPT5HO00267 1087 aaKnown RBP22.73■■□□□ 1.23
SEC24B-202ENST00000399100 SCRIBQ14160 1630 aa22.71■■□□□ 1.23
SEC24B-202ENST00000399100 CHIC1Q5VXU3 224 aa22.67■■□□□ 1.22
SEC24B-202ENST00000399100 RSF1Q96T23 1441 aaPredicted RBP22.59■■□□□ 1.21
SEC24B-202ENST00000399100 RB1CC1Q8TDY2 1594 aa22.53■■□□□ 1.2
SEC24B-202ENST00000399100 UNC13AQ9UPW8 1703 aa22.51■■□□□ 1.19
SEC24B-202ENST00000399100 EIF4G1Q04637 1599 aaKnown RBP22.47■■□□□ 1.19
SEC24B-202ENST00000399100 BAZ1AQ9NRL2 1556 aaPredicted RBP22.29■■□□□ 1.16
SEC24B-202ENST00000399100 MROH2BQ7Z745 1585 aa22.29■■□□□ 1.16
SEC24B-202ENST00000399100 CECR2Q9BXF3 1484 aa22.24■■□□□ 1.15
SEC24B-202ENST00000399100 WIZO95785 1651 aa22.23■■□□□ 1.15
SEC24B-202ENST00000399100 SMARCA4P51532 1647 aa22.05■■□□□ 1.12
SEC24B-202ENST00000399100 BICRAQ9NZM4 1560 aa22■■□□□ 1.11
SEC24B-202ENST00000399100 PEG3Q9GZU2 1588 aa21.97■■□□□ 1.11
SEC24B-202ENST00000399100 TOP2AP11388 1531 aaKnown RBP21.97■■□□□ 1.11
SEC24B-202ENST00000399100 SMARCA2P51531 1590 aa21.87■■□□□ 1.09
SEC24B-202ENST00000399100 HRCP23327 699 aa21.75■■□□□ 1.07
SEC24B-202ENST00000399100 LOC105371045A0A1W2PR82 267 aa21.67■■□□□ 1.06
SEC24B-202ENST00000399100 CCDC88BA6NC98 1476 aa21.64■■□□□ 1.06
SEC24B-202ENST00000399100 ABCC8Q09428 1581 aa21.46■■□□□ 1.03
SEC24B-202ENST00000399100 TRIM41Q8WV44 630 aa21.38■■□□□ 1.01
SEC24B-202ENST00000399100 PCGF6Q9BYE7 350 aa21.36■■□□□ 1.01
SEC24B-202ENST00000399100 TRIM26Q12899 539 aaPredicted RBP21.32■■□□□ 1
SEC24B-202ENST00000399100 WRNQ14191 1432 aaPredicted RBP eCLIP21.31■■□□□ 1
SEC24B-202ENST00000399100 EHMT2Q96KQ7 1210 aa21.3■■□□□ 1
SEC24B-202ENST00000399100 ATAD2BQ9ULI0 1458 aa21.29■■□□□ 1
SEC24B-202ENST00000399100 SYNJ1O43426 1573 aa21.28■■□□□ 1
SEC24B-202ENST00000399100 BIVM-ERCC5R4GMW8 1640 aa21.25■□□□□ 0.99
SEC24B-202ENST00000399100 KIF21BO75037 1637 aa21.23■□□□□ 0.99
SEC24B-202ENST00000399100 PRDM2Q13029 1718 aa21.21■□□□□ 0.99
SEC24B-202ENST00000399100 EEA1Q15075 1411 aa21.2■□□□□ 0.98
SEC24B-202ENST00000399100 HMGXB3Q12766 1538 aa21.18■□□□□ 0.98
SEC24B-202ENST00000399100 TOP2BQ02880 1626 aa21.13■□□□□ 0.97
SEC24B-202ENST00000399100 SOGA1O94964 1423 aa21.12■□□□□ 0.97
SEC24B-202ENST00000399100 RUSC2Q8N2Y8 1516 aa21.11■□□□□ 0.97
SEC24B-202ENST00000399100 TNIKQ9UKE5 1360 aa21.06■□□□□ 0.96
SEC24B-202ENST00000399100 BAZ1BQ9UIG0 1483 aaKnown RBP21.02■□□□□ 0.96
SEC24B-202ENST00000399100 PPARGC1BQ86YN6 1023 aaKnown RBP21.01■□□□□ 0.95
SEC24B-202ENST00000399100 NCAPD3P42695 1498 aa21■□□□□ 0.95
SEC24B-202ENST00000399100 CEP162Q5TB80 1403 aa20.97■□□□□ 0.95
SEC24B-202ENST00000399100 GOLGA3Q08378 1498 aa20.92■□□□□ 0.94
SEC24B-202ENST00000399100 ERICH3Q5RHP9 1530 aa20.86■□□□□ 0.93
SEC24B-202ENST00000399100 PABPN1Q86U42 306 aaKnown RBP eCLIP20.85■□□□□ 0.93
SEC24B-202ENST00000399100 CEP164Q9UPV0 1460 aa20.85■□□□□ 0.93
SEC24B-202ENST00000399100 FAM9AQ8IZU1 332 aaPredicted RBP20.84■□□□□ 0.93
SEC24B-202ENST00000399100 CUX1P39880 1505 aa20.8■□□□□ 0.92
SEC24B-202ENST00000399100 CFTRP13569 1480 aa20.79■□□□□ 0.92
SEC24B-202ENST00000399100 PRXQ9BXM0 1461 aa20.77■□□□□ 0.91
SEC24B-202ENST00000399100 ZEB1P37275 1124 aaPredicted RBP20.76■□□□□ 0.91
SEC24B-202ENST00000399100 CSRNP3Q8WYN3 585 aa20.73■□□□□ 0.91
SEC24B-202ENST00000399100 RAPGEF2Q9Y4G8 1499 aa20.69■□□□□ 0.9
SEC24B-202ENST00000399100 VPS8Q8N3P4 1428 aa20.6■□□□□ 0.89
SEC24B-202ENST00000399100 ARAP1Q96P48 1450 aa20.57■□□□□ 0.88
SEC24B-202ENST00000399100 CLIP1P30622 1438 aa20.57■□□□□ 0.88
SEC24B-202ENST00000399100 WDR97A6NE52 1622 aa20.53■□□□□ 0.88
SEC24B-202ENST00000399100 CC2D2AQ9P2K1 1620 aa20.45■□□□□ 0.86
SEC24B-202ENST00000399100 CUX2O14529 1486 aa20.41■□□□□ 0.86
SEC24B-202ENST00000399100 MAP3K1Q13233 1512 aa20.39■□□□□ 0.85
SEC24B-202ENST00000399100 TTBK1Q5TCY1 1321 aaPredicted RBP20.38■□□□□ 0.85
SEC24B-202ENST00000399100 CFAP43Q8NDM7 1665 aa20.35■□□□□ 0.85
SEC24B-202ENST00000399100 ARHGAP35Q9NRY4 1499 aa20.34■□□□□ 0.85
SEC24B-202ENST00000399100 KIF27Q86VH2 1401 aa20.31■□□□□ 0.84
SEC24B-202ENST00000399100 DNMBPQ6XZF7 1577 aa20.3■□□□□ 0.84
SEC24B-202ENST00000399100 RRBP1Q9P2E9 1410 aaKnown RBP20.3■□□□□ 0.84
SEC24B-202ENST00000399100 CADPSQ9ULU8 1353 aa20.29■□□□□ 0.84
SEC24B-202ENST00000399100 CTTNBP2Q8WZ74 1663 aa20.27■□□□□ 0.84
SEC24B-202ENST00000399100 FGD5Q6ZNL6 1462 aa20.24■□□□□ 0.83
SEC24B-202ENST00000399100 CUL7Q14999 1698 aa20.24■□□□□ 0.83
SEC24B-202ENST00000399100 ABCA10Q8WWZ4 1543 aa20.22■□□□□ 0.83
SEC24B-202ENST00000399100 ABCA5Q8WWZ7 1642 aa20.22■□□□□ 0.83
SEC24B-202ENST00000399100 IGF1RP08069 1367 aa20.22■□□□□ 0.83
SEC24B-202ENST00000399100 LRRIQ1Q96JM4 1722 aa20.21■□□□□ 0.83
SEC24B-202ENST00000399100 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.21■□□□□ 0.83
SEC24B-202ENST00000399100 TIAM1Q13009 1591 aa20.21■□□□□ 0.83
SEC24B-202ENST00000399100 LAMC3Q9Y6N6 1575 aa20.18■□□□□ 0.82
SEC24B-202ENST00000399100 UBTFP17480 764 aaKnown RBP20.16■□□□□ 0.82
SEC24B-202ENST00000399100 TOPBP1Q92547 1522 aa20.13■□□□□ 0.81
SEC24B-202ENST00000399100 SAMD9Q5K651 1589 aa20.12■□□□□ 0.81
SEC24B-202ENST00000399100 FANCD2Q9BXW9 1451 aa20.12■□□□□ 0.81
SEC24B-202ENST00000399100 RANGAP1P46060 587 aaPredicted RBP20.11■□□□□ 0.81
SEC24B-202ENST00000399100 POLA1P09884 1462 aaPredicted RBP20.08■□□□□ 0.81
SEC24B-202ENST00000399100 PCF11O94913 1555 aaKnown RBP20.08■□□□□ 0.8
SEC24B-202ENST00000399100 EFCAB5A4FU69 1503 aa20.07■□□□□ 0.8
SEC24B-202ENST00000399100 KIF21AQ7Z4S6 1674 aa20.07■□□□□ 0.8
SEC24B-202ENST00000399100 AQRO60306 1485 aaKnown RBP eCLIP20.06■□□□□ 0.82e-9■■■■■ 40.3
SEC24B-202ENST00000399100 TARBP1Q13395 1621 aaKnown RBP20.06■□□□□ 0.8
SEC24B-202ENST00000399100 URB2Q14146 1524 aaKnown RBP20.03■□□□□ 0.8
SEC24B-202ENST00000399100 CCER1Q8TC90 406 aaPredicted RBP20■□□□□ 0.79
SEC24B-202ENST00000399100 DHX57Q6P158 1386 aaKnown RBP20■□□□□ 0.79
SEC24B-202ENST00000399100 CLSPNQ9HAW4 1339 aa19.99■□□□□ 0.79
SEC24B-202ENST00000399100 PELP1Q8IZL8 1130 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms