RNA–Protein interactions for RNA: ENST00000397912.3

PRKRIP1-201, Transcript of PRKR interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKRIP1, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKRIP1-201ENST00000397912 NISCHQ9Y2I1 1504 aa31.24■■■□□ 2.59
PRKRIP1-201ENST00000397912 SHROOM4Q9ULL8 1493 aa26.54■■□□□ 1.84
PRKRIP1-201ENST00000397912 CCDC180Q9P1Z9 1646 aa26.51■■□□□ 1.83
PRKRIP1-201ENST00000397912 ZCCHC6Q5VYS8 1495 aaKnown RBP26.48■■□□□ 1.83
PRKRIP1-201ENST00000397912 SUPT5HO00267 1087 aaKnown RBP26.14■■□□□ 1.78
PRKRIP1-201ENST00000397912 DCAF1Q9Y4B6 1507 aa25.75■■□□□ 1.71
PRKRIP1-201ENST00000397912 DCAF8L2P0C7V8 631 aa25.66■■□□□ 1.7
PRKRIP1-201ENST00000397912 CHIC1Q5VXU3 224 aa25.61■■□□□ 1.69
PRKRIP1-201ENST00000397912 MYO15BQ96JP2 1530 aa25.47■■□□□ 1.67
PRKRIP1-201ENST00000397912 HRCP23327 699 aa25.1■■□□□ 1.61
PRKRIP1-201ENST00000397912 ABCC9O60706 1549 aa24.99■■□□□ 1.59
PRKRIP1-201ENST00000397912 PCGF6Q9BYE7 350 aa24.89■■□□□ 1.58
PRKRIP1-201ENST00000397912 RSF1Q96T23 1441 aaPredicted RBP24.78■■□□□ 1.56
PRKRIP1-201ENST00000397912 LOC105371045A0A1W2PR82 267 aa24.76■■□□□ 1.55
PRKRIP1-201ENST00000397912 SCRIBQ14160 1630 aa24.74■■□□□ 1.55
PRKRIP1-201ENST00000397912 RB1CC1Q8TDY2 1594 aa24.54■■□□□ 1.52
PRKRIP1-201ENST00000397912 TRIM26Q12899 539 aaPredicted RBP24.5■■□□□ 1.51
PRKRIP1-201ENST00000397912 NACADO15069 1562 aa24.5■■□□□ 1.51
PRKRIP1-201ENST00000397912 TRIM41Q8WV44 630 aa24.44■■□□□ 1.5
PRKRIP1-201ENST00000397912 PPARGC1BQ86YN6 1023 aaKnown RBP24.39■■□□□ 1.5
PRKRIP1-201ENST00000397912 CECR2Q9BXF3 1484 aa24.28■■□□□ 1.48
PRKRIP1-201ENST00000397912 MROH2BQ7Z745 1585 aa24.24■■□□□ 1.47
PRKRIP1-201ENST00000397912 FAM9AQ8IZU1 332 aaPredicted RBP24.11■■□□□ 1.45
PRKRIP1-201ENST00000397912 ZEB1P37275 1124 aaPredicted RBP24.1■■□□□ 1.45
PRKRIP1-201ENST00000397912 WIZO95785 1651 aa24.07■■□□□ 1.44
PRKRIP1-201ENST00000397912 BAZ1AQ9NRL2 1556 aaPredicted RBP24.03■■□□□ 1.44
PRKRIP1-201ENST00000397912 EIF4G1Q04637 1599 aaKnown RBP23.91■■□□□ 1.42
PRKRIP1-201ENST00000397912 TOP2AP11388 1531 aaKnown RBP23.8■■□□□ 1.4
PRKRIP1-201ENST00000397912 EHMT2Q96KQ7 1210 aa23.79■■□□□ 1.4
PRKRIP1-201ENST00000397912 SMARCA4P51532 1647 aa23.73■■□□□ 1.39
PRKRIP1-201ENST00000397912 CCDC88BA6NC98 1476 aa23.67■■□□□ 1.38
PRKRIP1-201ENST00000397912 SMARCA2P51531 1590 aa23.64■■□□□ 1.38
PRKRIP1-201ENST00000397912 ABCC8Q09428 1581 aa23.58■■□□□ 1.36
PRKRIP1-201ENST00000397912 WRNQ14191 1432 aaPredicted RBP eCLIP23.55■■□□□ 1.36
PRKRIP1-201ENST00000397912 UNC13AQ9UPW8 1703 aa23.54■■□□□ 1.36
PRKRIP1-201ENST00000397912 EEA1Q15075 1411 aa23.49■■□□□ 1.35
PRKRIP1-201ENST00000397912 TNIKQ9UKE5 1360 aa23.46■■□□□ 1.35
PRKRIP1-201ENST00000397912 CEP162Q5TB80 1403 aa23.44■■□□□ 1.34
PRKRIP1-201ENST00000397912 SOGA1O94964 1423 aa23.43■■□□□ 1.34
PRKRIP1-201ENST00000397912 CSRNP3Q8WYN3 585 aa23.38■■□□□ 1.33
PRKRIP1-201ENST00000397912 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.37■■□□□ 1.33
PRKRIP1-201ENST00000397912 CCER1Q8TC90 406 aaPredicted RBP23.37■■□□□ 1.33
PRKRIP1-201ENST00000397912 PEG3Q9GZU2 1588 aa23.36■■□□□ 1.33
PRKRIP1-201ENST00000397912 BICRAQ9NZM4 1560 aa23.33■■□□□ 1.33
PRKRIP1-201ENST00000397912 RUSC2Q8N2Y8 1516 aa23.28■■□□□ 1.32
PRKRIP1-201ENST00000397912 GOLGA3Q08378 1498 aa23.26■■□□□ 1.31
PRKRIP1-201ENST00000397912 PABPN1Q86U42 306 aaKnown RBP eCLIP23.24■■□□□ 1.319e-7■■■□□ 19
PRKRIP1-201ENST00000397912 UBTFP17480 764 aaKnown RBP23.23■■□□□ 1.31
PRKRIP1-201ENST00000397912 SCAF1Q9H7N4 1312 aaKnown RBP23.14■■□□□ 1.3
PRKRIP1-201ENST00000397912 CEP164Q9UPV0 1460 aa23.13■■□□□ 1.29
PRKRIP1-201ENST00000397912 ATAD2BQ9ULI0 1458 aa23.11■■□□□ 1.29
PRKRIP1-201ENST00000397912 KIF21BO75037 1637 aa23.09■■□□□ 1.29
PRKRIP1-201ENST00000397912 TTBK1Q5TCY1 1321 aaPredicted RBP23.09■■□□□ 1.29
PRKRIP1-201ENST00000397912 SYNJ1O43426 1573 aa23.09■■□□□ 1.29
PRKRIP1-201ENST00000397912 BAZ1BQ9UIG0 1483 aaKnown RBP23.04■■□□□ 1.28
PRKRIP1-201ENST00000397912 DIEXFQ68CQ4 756 aaKnown RBP23.01■■□□□ 1.27
PRKRIP1-201ENST00000397912 PELP1Q8IZL8 1130 aaKnown RBP23.01■■□□□ 1.27
PRKRIP1-201ENST00000397912 CLIP1P30622 1438 aa22.98■■□□□ 1.27
PRKRIP1-201ENST00000397912 ACIN1Q9UKV3 1341 aaKnown RBP22.95■■□□□ 1.26
PRKRIP1-201ENST00000397912 VPS8Q8N3P4 1428 aa22.93■■□□□ 1.26
PRKRIP1-201ENST00000397912 RAPGEF2Q9Y4G8 1499 aa22.87■■□□□ 1.25
PRKRIP1-201ENST00000397912 TOP2BQ02880 1626 aa22.85■■□□□ 1.25
PRKRIP1-201ENST00000397912 ZNF316A6NFI3 1004 aaPredicted RBP22.84■■□□□ 1.25
PRKRIP1-201ENST00000397912 NEUROD1Q13562 356 aa22.84■■□□□ 1.25
PRKRIP1-201ENST00000397912 CENPBP07199 599 aaPredicted RBP22.83■■□□□ 1.24
PRKRIP1-201ENST00000397912 APLP2Q06481 763 aa22.79■■□□□ 1.24
PRKRIP1-201ENST00000397912 BIVM-ERCC5R4GMW8 1640 aa22.76■■□□□ 1.23
PRKRIP1-201ENST00000397912 HNRNPUL2Q1KMD3 747 aaKnown RBP22.75■■□□□ 1.23
PRKRIP1-201ENST00000397912 ERICH3Q5RHP9 1530 aa22.73■■□□□ 1.23
PRKRIP1-201ENST00000397912 PRXQ9BXM0 1461 aa22.71■■□□□ 1.23
PRKRIP1-201ENST00000397912 NCAPD3P42695 1498 aa22.69■■□□□ 1.22
PRKRIP1-201ENST00000397912 HMGXB3Q12766 1538 aa22.68■■□□□ 1.22
PRKRIP1-201ENST00000397912 GTF3C3Q9Y5Q9 886 aa22.62■■□□□ 1.21
PRKRIP1-201ENST00000397912 ARAP1Q96P48 1450 aa22.58■■□□□ 1.21
PRKRIP1-201ENST00000397912 CLSPNQ9HAW4 1339 aa22.58■■□□□ 1.21
PRKRIP1-201ENST00000397912 RANGAP1P46060 587 aaPredicted RBP22.57■■□□□ 1.2
PRKRIP1-201ENST00000397912 CUX1P39880 1505 aa22.57■■□□□ 1.2
PRKRIP1-201ENST00000397912 KIF27Q86VH2 1401 aa22.56■■□□□ 1.2
PRKRIP1-201ENST00000397912 CFTRP13569 1480 aa22.53■■□□□ 1.2
PRKRIP1-201ENST00000397912 MIER1Q8N108 512 aa22.47■■□□□ 1.19
PRKRIP1-201ENST00000397912 DHX57Q6P158 1386 aaKnown RBP22.44■■□□□ 1.18
PRKRIP1-201ENST00000397912 RRBP1Q9P2E9 1410 aaKnown RBP22.44■■□□□ 1.18
PRKRIP1-201ENST00000397912 KANK4Q5T7N3 995 aaPredicted RBP22.44■■□□□ 1.18
PRKRIP1-201ENST00000397912 ARHGAP35Q9NRY4 1499 aa22.37■■□□□ 1.17
PRKRIP1-201ENST00000397912 CUX2O14529 1486 aa22.37■■□□□ 1.17
PRKRIP1-201ENST00000397912 YTHDC1Q96MU7 727 aaKnown RBP22.35■■□□□ 1.17
PRKRIP1-201ENST00000397912 CCNB3Q8WWL7 1395 aa22.31■■□□□ 1.16
PRKRIP1-201ENST00000397912 IGF1RP08069 1367 aa22.29■■□□□ 1.16
PRKRIP1-201ENST00000397912 PRDM2Q13029 1718 aa22.27■■□□□ 1.16
PRKRIP1-201ENST00000397912 MAP3K1Q13233 1512 aa22.25■■□□□ 1.15
PRKRIP1-201ENST00000397912 CADPSQ9ULU8 1353 aa22.23■■□□□ 1.15
PRKRIP1-201ENST00000397912 CARMIL1Q5VZK9 1371 aa22.18■■□□□ 1.14
PRKRIP1-201ENST00000397912 TIAM1Q13009 1591 aa22.16■■□□□ 1.14
PRKRIP1-201ENST00000397912 FGD5Q6ZNL6 1462 aa22.14■■□□□ 1.13
PRKRIP1-201ENST00000397912 LRRC9Q6ZRR7 1453 aa22.09■■□□□ 1.13
PRKRIP1-201ENST00000397912 RAB3GAP2Q9H2M9 1393 aa22.09■■□□□ 1.13
PRKRIP1-201ENST00000397912 FHAD1B1AJZ9 1412 aa22.09■■□□□ 1.13
PRKRIP1-201ENST00000397912 ITGAEP38570 1179 aa22.05■■□□□ 1.12
PRKRIP1-201ENST00000397912 SETD5Q9C0A6 1442 aa22.03■■□□□ 1.12
PRKRIP1-201ENST00000397912 MAPKBP1O60336 1514 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms