RNA–Protein interactions for RNA: ENST00000396505.6

DKK3-202, Transcript of dickkopf WNT signaling pathway inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DKK3, Length 2,650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3-202ENST00000396505 NISCHQ9Y2I1 1504 aa39.54■■■■□ 3.92
DKK3-202ENST00000396505 SHROOM4Q9ULL8 1493 aa33.99■■■■□ 3.03
DKK3-202ENST00000396505 CCDC180Q9P1Z9 1646 aa33.58■■■□□ 2.97
DKK3-202ENST00000396505 DCAF8L2P0C7V8 631 aa33.53■■■□□ 2.96
DKK3-202ENST00000396505 ZCCHC6Q5VYS8 1495 aaKnown RBP33.32■■■□□ 2.93
DKK3-202ENST00000396505 SUPT5HO00267 1087 aaKnown RBP33.12■■■□□ 2.89
DKK3-202ENST00000396505 DCAF1Q9Y4B6 1507 aa32.17■■■□□ 2.74
DKK3-202ENST00000396505 ABCC9O60706 1549 aa31.96■■■□□ 2.71
DKK3-202ENST00000396505 SCRIBQ14160 1630 aa31.83■■■□□ 2.69
DKK3-202ENST00000396505 CHIC1Q5VXU3 224 aa31.75■■■□□ 2.67
DKK3-202ENST00000396505 MYO15BQ96JP2 1530 aa31.59■■■□□ 2.65
DKK3-202ENST00000396505 RSF1Q96T23 1441 aaPredicted RBP31.23■■■□□ 2.59
DKK3-202ENST00000396505 NACADO15069 1562 aa31.22■■■□□ 2.59
DKK3-202ENST00000396505 CECR2Q9BXF3 1484 aa31.08■■■□□ 2.57
DKK3-202ENST00000396505 LOC105371045A0A1W2PR82 267 aa31.03■■■□□ 2.56
DKK3-202ENST00000396505 RB1CC1Q8TDY2 1594 aa30.93■■■□□ 2.54
DKK3-202ENST00000396505 MROH2BQ7Z745 1585 aa30.86■■■□□ 2.53
DKK3-202ENST00000396505 FAM9AQ8IZU1 332 aaPredicted RBP30.71■■■□□ 2.51
DKK3-202ENST00000396505 EHMT2Q96KQ7 1210 aa30.7■■■□□ 2.51
DKK3-202ENST00000396505 WIZO95785 1651 aa30.69■■■□□ 2.5
DKK3-202ENST00000396505 TRIM41Q8WV44 630 aa30.69■■■□□ 2.5
DKK3-202ENST00000396505 PABPN1Q86U42 306 aaKnown RBP eCLIP30.64■■■□□ 2.5
DKK3-202ENST00000396505 PCGF6Q9BYE7 350 aa30.58■■■□□ 2.49
DKK3-202ENST00000396505 UNC13AQ9UPW8 1703 aa30.48■■■□□ 2.47
DKK3-202ENST00000396505 BAZ1AQ9NRL2 1556 aaPredicted RBP30.36■■■□□ 2.45
DKK3-202ENST00000396505 HRCP23327 699 aa30.22■■■□□ 2.43
DKK3-202ENST00000396505 SMARCA4P51532 1647 aa30.2■■■□□ 2.43
DKK3-202ENST00000396505 BICRAQ9NZM4 1560 aa30.1■■■□□ 2.41
DKK3-202ENST00000396505 CCDC88BA6NC98 1476 aa30.04■■■□□ 2.4
DKK3-202ENST00000396505 TOP2AP11388 1531 aaKnown RBP30.02■■■□□ 2.4
DKK3-202ENST00000396505 PPARGC1BQ86YN6 1023 aaKnown RBP29.99■■■□□ 2.39
DKK3-202ENST00000396505 ABCC8Q09428 1581 aa29.97■■■□□ 2.39
DKK3-202ENST00000396505 SMARCA2P51531 1590 aa29.91■■■□□ 2.38
DKK3-202ENST00000396505 EIF4G1Q04637 1599 aaKnown RBP29.87■■■□□ 2.37
DKK3-202ENST00000396505 TRIM26Q12899 539 aaPredicted RBP29.82■■■□□ 2.36
DKK3-202ENST00000396505 SOGA1O94964 1423 aa29.61■■■□□ 2.33
DKK3-202ENST00000396505 ATAD2BQ9ULI0 1458 aa29.56■■■□□ 2.32
DKK3-202ENST00000396505 TTBK1Q5TCY1 1321 aaPredicted RBP29.55■■■□□ 2.32
DKK3-202ENST00000396505 RUSC2Q8N2Y8 1516 aa29.51■■■□□ 2.32
DKK3-202ENST00000396505 BAZ1BQ9UIG0 1483 aaKnown RBP29.51■■■□□ 2.31
DKK3-202ENST00000396505 PEG3Q9GZU2 1588 aa29.44■■■□□ 2.3
DKK3-202ENST00000396505 UBTFP17480 764 aaKnown RBP29.38■■■□□ 2.29
DKK3-202ENST00000396505 WRNQ14191 1432 aaPredicted RBP eCLIP29.37■■■□□ 2.29
DKK3-202ENST00000396505 CSRNP3Q8WYN3 585 aa29.33■■■□□ 2.29
DKK3-202ENST00000396505 SYNJ1O43426 1573 aa29.25■■■□□ 2.27
DKK3-202ENST00000396505 RANGAP1P46060 587 aaPredicted RBP29.22■■■□□ 2.27
DKK3-202ENST00000396505 CEP162Q5TB80 1403 aa29.2■■■□□ 2.26
DKK3-202ENST00000396505 TNIKQ9UKE5 1360 aa29.05■■■□□ 2.24
DKK3-202ENST00000396505 EEA1Q15075 1411 aa29.02■■■□□ 2.24
DKK3-202ENST00000396505 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29■■■□□ 2.23
DKK3-202ENST00000396505 GOLGA3Q08378 1498 aa28.98■■■□□ 2.23
DKK3-202ENST00000396505 NCAPD3P42695 1498 aa28.95■■■□□ 2.22
DKK3-202ENST00000396505 RAPGEF2Q9Y4G8 1499 aa28.85■■■□□ 2.21
DKK3-202ENST00000396505 HMGXB3Q12766 1538 aa28.85■■■□□ 2.21
DKK3-202ENST00000396505 CEP164Q9UPV0 1460 aa28.83■■■□□ 2.21
DKK3-202ENST00000396505 ZEB1P37275 1124 aaPredicted RBP28.82■■■□□ 2.2
DKK3-202ENST00000396505 CCER1Q8TC90 406 aaPredicted RBP28.79■■■□□ 2.2
DKK3-202ENST00000396505 TOP2BQ02880 1626 aa28.78■■■□□ 2.2
DKK3-202ENST00000396505 CLIP1P30622 1438 aa28.74■■■□□ 2.19
DKK3-202ENST00000396505 CUX1P39880 1505 aa28.72■■■□□ 2.19
DKK3-202ENST00000396505 KIF21BO75037 1637 aa28.69■■■□□ 2.18
DKK3-202ENST00000396505 CFTRP13569 1480 aa28.66■■■□□ 2.18
DKK3-202ENST00000396505 BIVM-ERCC5R4GMW8 1640 aa28.63■■■□□ 2.17
DKK3-202ENST00000396505 CC2D2AQ9P2K1 1620 aa28.59■■■□□ 2.17
DKK3-202ENST00000396505 HNRNPUL2Q1KMD3 747 aaKnown RBP28.57■■■□□ 2.16
DKK3-202ENST00000396505 APLP2Q06481 763 aa28.53■■■□□ 2.16
DKK3-202ENST00000396505 CADPSQ9ULU8 1353 aa28.49■■■□□ 2.15
DKK3-202ENST00000396505 VPS8Q8N3P4 1428 aa28.47■■■□□ 2.15
DKK3-202ENST00000396505 KIF27Q86VH2 1401 aa28.46■■■□□ 2.15
DKK3-202ENST00000396505 PRXQ9BXM0 1461 aa28.42■■■□□ 2.14
DKK3-202ENST00000396505 CUX2O14529 1486 aa28.38■■■□□ 2.13
DKK3-202ENST00000396505 DNAJC5BQ9UF47 199 aa28.38■■■□□ 2.13
DKK3-202ENST00000396505 NESP48681 1621 aa28.35■■■□□ 2.13
DKK3-202ENST00000396505 FGD5Q6ZNL6 1462 aa28.3■■■□□ 2.12
DKK3-202ENST00000396505 KANK4Q5T7N3 995 aaPredicted RBP28.28■■■□□ 2.12
DKK3-202ENST00000396505 ERICH3Q5RHP9 1530 aa28.28■■■□□ 2.12
DKK3-202ENST00000396505 ARAP1Q96P48 1450 aa28.27■■■□□ 2.12
DKK3-202ENST00000396505 FANCD2Q9BXW9 1451 aa28.26■■■□□ 2.11
DKK3-202ENST00000396505 PRDM2Q13029 1718 aa28.25■■■□□ 2.11
DKK3-202ENST00000396505 IGF1RP08069 1367 aa28.23■■■□□ 2.11
DKK3-202ENST00000396505 P3H3Q8IVL6 736 aa28.19■■■□□ 2.1
DKK3-202ENST00000396505 RAD54L2Q9Y4B4 1467 aa28.19■■■□□ 2.1
DKK3-202ENST00000396505 CARMIL1Q5VZK9 1371 aa28.14■■■□□ 2.09
DKK3-202ENST00000396505 ARHGAP35Q9NRY4 1499 aa28.1■■■□□ 2.09
DKK3-202ENST00000396505 ITGAEP38570 1179 aa28.08■■■□□ 2.09
DKK3-202ENST00000396505 ATP1B4Q9UN42 357 aaPredicted RBP28.08■■■□□ 2.09
DKK3-202ENST00000396505 TOPBP1Q92547 1522 aa28■■■□□ 2.07
DKK3-202ENST00000396505 POLA1P09884 1462 aaPredicted RBP27.99■■■□□ 2.07
DKK3-202ENST00000396505 DIEXFQ68CQ4 756 aaKnown RBP27.95■■■□□ 2.07
DKK3-202ENST00000396505 DNMBPQ6XZF7 1577 aa27.93■■■□□ 2.06
DKK3-202ENST00000396505 TDRD9Q8NDG6 1382 aaKnown RBP27.91■■■□□ 2.06
DKK3-202ENST00000396505 URB2Q14146 1524 aaKnown RBP27.88■■■□□ 2.05
DKK3-202ENST00000396505 SCAF1Q9H7N4 1312 aaKnown RBP27.84■■■□□ 2.05
DKK3-202ENST00000396505 ABCA10Q8WWZ4 1543 aa27.81■■■□□ 2.04
DKK3-202ENST00000396505 FHOD3Q2V2M9 1422 aa27.81■■■□□ 2.04
DKK3-202ENST00000396505 LAMC3Q9Y6N6 1575 aa27.75■■■□□ 2.03
DKK3-202ENST00000396505 ZNF316A6NFI3 1004 aaPredicted RBP27.75■■■□□ 2.03
DKK3-202ENST00000396505 CCNB3Q8WWL7 1395 aa27.73■■■□□ 2.03
DKK3-202ENST00000396505 FAM50AQ14320 339 aaKnown RBP27.7■■■□□ 2.03
DKK3-202ENST00000396505 KIF21AQ7Z4S6 1674 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms