RNA–Protein interactions for RNA: ENST00000396133.7

CCNE2-202, Transcript of cyclin E2, humanhuman

TSL 1 (best) BASIC

Gene CCNE2, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE2-202ENST00000396133 AEBP2Q6ZN18 517 aaPredicted RBP29.52■■■□□ 2.32
CCNE2-202ENST00000396133 CHIC1Q5VXU3 224 aa28.08■■■□□ 2.09
CCNE2-202ENST00000396133 SENP3Q9H4L4 574 aaPredicted RBP25.12■■□□□ 1.61
CCNE2-202ENST00000396133 PHF23Q9BUL5 403 aaPredicted RBP24.82■■□□□ 1.56
CCNE2-202ENST00000396133 FOXD1Q16676 465 aa23.48■■□□□ 1.35
CCNE2-202ENST00000396133 PLPPR3Q6T4P5 718 aa23.16■■□□□ 1.3
CCNE2-202ENST00000396133 MSH5O43196 834 aa21.96■■□□□ 1.11
CCNE2-202ENST00000396133 PPP6R1Q9UPN7 881 aa21.9■■□□□ 1.1
CCNE2-202ENST00000396133 PIAS4Q8N2W9 510 aaPredicted RBP21.87■■□□□ 1.09
CCNE2-202ENST00000396133 ADRA2BP18089 450 aa21.8■■□□□ 1.08
CCNE2-202ENST00000396133 POTEDQ86YR6 584 aa21.62■■□□□ 1.05
CCNE2-202ENST00000396133 KCNA4P22459 653 aa20.97■□□□□ 0.95
CCNE2-202ENST00000396133 PPP4R3CPQ6ZMV5 832 aa20.49■□□□□ 0.87
CCNE2-202ENST00000396133 EHMT2Q96KQ7 1210 aa20.48■□□□□ 0.87
CCNE2-202ENST00000396133 NCBP3Q53F19 620 aaKnown RBP20.19■□□□□ 0.82
CCNE2-202ENST00000396133 SLC4A1APQ9BWU0 796 aaKnown RBP20.11■□□□□ 0.81
CCNE2-202ENST00000396133 MAPK8IP2Q13387 824 aaPredicted RBP20.08■□□□□ 0.8
CCNE2-202ENST00000396133 DMRT2Q9Y5R5 561 aa19.94■□□□□ 0.78
CCNE2-202ENST00000396133 NPM3O75607 178 aaKnown RBP19.91■□□□□ 0.78
CCNE2-202ENST00000396133 SCAF1Q9H7N4 1312 aaKnown RBP19.89■□□□□ 0.77
CCNE2-202ENST00000396133 CSRNP3Q8WYN3 585 aa19.83■□□□□ 0.77
CCNE2-202ENST00000396133 CNKSR2Q8WXI2 1034 aa19.74■□□□□ 0.75
CCNE2-202ENST00000396133 ZBTB22O15209 634 aa19.32■□□□□ 0.68
CCNE2-202ENST00000396133 DNAJC5BQ9UF47 199 aa19.22■□□□□ 0.67
CCNE2-202ENST00000396133 HOXD11P31277 338 aaPredicted RBP19.19■□□□□ 0.66
CCNE2-202ENST00000396133 RNF216Q9NWF9 866 aaPredicted RBP19.16■□□□□ 0.66
CCNE2-202ENST00000396133 FOXD4L1Q9NU39 408 aa19.08■□□□□ 0.65
CCNE2-202ENST00000396133 DCAF8L1A6NGE4 600 aa19.06■□□□□ 0.64
CCNE2-202ENST00000396133 CACNB1Q02641 598 aaPredicted RBP18.9■□□□□ 0.62
CCNE2-202ENST00000396133 RNF39Q9H2S5 420 aa18.76■□□□□ 0.59
CCNE2-202ENST00000396133 SLC4A2P04920 1241 aa18.6■□□□□ 0.57
CCNE2-202ENST00000396133 C1QBPQ07021 282 aaKnown RBP18.45■□□□□ 0.54
CCNE2-202ENST00000396133 MYCNP04198 464 aaPredicted RBP18.41■□□□□ 0.54
CCNE2-202ENST00000396133 ATXN8OSP0DMR3 200 aa18.31■□□□□ 0.52
CCNE2-202ENST00000396133 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.22■□□□□ 0.51
CCNE2-202ENST00000396133 FKBP8Q14318 412 aa17.91■□□□□ 0.46
CCNE2-202ENST00000396133 U3KPZ7 1027 aaPredicted RBP17.88■□□□□ 0.45
CCNE2-202ENST00000396133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.84■□□□□ 0.45
CCNE2-202ENST00000396133 HNRNPUL2Q1KMD3 747 aaKnown RBP17.84■□□□□ 0.45
CCNE2-202ENST00000396133 SAMD1Q6SPF0 538 aaPredicted RBP17.83■□□□□ 0.45
CCNE2-202ENST00000396133 ATF5Q9Y2D1 282 aaPredicted RBP17.81■□□□□ 0.44
CCNE2-202ENST00000396133 AMER1Q5JTC6 1135 aaPredicted RBP17.77■□□□□ 0.43
CCNE2-202ENST00000396133 RTN4Q9NQC3 1192 aaKnown RBP17.75■□□□□ 0.43
CCNE2-202ENST00000396133 SPINK5Q9NQ38 1064 aaPredicted RBP17.66■□□□□ 0.42
CCNE2-202ENST00000396133 CAPN15O75808 1086 aa17.58■□□□□ 0.4
CCNE2-202ENST00000396133 DSG3P32926 999 aa17.54■□□□□ 0.4
CCNE2-202ENST00000396133 APLP2Q06481 763 aa17.48■□□□□ 0.39
CCNE2-202ENST00000396133 ZNF219Q9P2Y4 722 aaPredicted RBP17.43■□□□□ 0.38
CCNE2-202ENST00000396133 SLC24A1O60721 1099 aa17.38■□□□□ 0.37
CCNE2-202ENST00000396133 TRHP20396 242 aaPredicted RBP17.28■□□□□ 0.36
CCNE2-202ENST00000396133 ABCB7O75027 752 aa17.17■□□□□ 0.34
CCNE2-202ENST00000396133 SPDYE4A6NLX3 237 aa17.11■□□□□ 0.33
CCNE2-202ENST00000396133 MKRN4PQ13434 485 aaPredicted RBP17.1■□□□□ 0.33
CCNE2-202ENST00000396133 FBLN2P98095 1184 aa17.03■□□□□ 0.32
CCNE2-202ENST00000396133 FBXO3Q9UK99 471 aa17.03■□□□□ 0.32
CCNE2-202ENST00000396133 PROM2Q8N271 834 aa16.97■□□□□ 0.31
CCNE2-202ENST00000396133 POLA2Q14181 598 aa16.94■□□□□ 0.3
CCNE2-202ENST00000396133 POTEHQ6S545 545 aa16.91■□□□□ 0.3
CCNE2-202ENST00000396133 VASPP50552 380 aaPredicted RBP16.82■□□□□ 0.28
CCNE2-202ENST00000396133 ZBTB12Q9Y330 459 aaPredicted RBP16.78■□□□□ 0.28
CCNE2-202ENST00000396133 RBM42Q9BTD8 480 aaKnown RBP16.68■□□□□ 0.26
CCNE2-202ENST00000396133 IFNLR1Q8IU57 520 aaPredicted RBP16.61■□□□□ 0.25
CCNE2-202ENST00000396133 OSCARQ8IYS5 282 aa16.4■□□□□ 0.22
CCNE2-202ENST00000396133 ZNF692Q9BU19 519 aaPredicted RBP16.4■□□□□ 0.22
CCNE2-202ENST00000396133 PLCB2Q00722 1185 aa16.38■□□□□ 0.21
CCNE2-202ENST00000396133 CHRDL2Q6WN34 429 aa16.38■□□□□ 0.21
CCNE2-202ENST00000396133 SPDYE2BA6NHP3 402 aa16.38■□□□□ 0.21
CCNE2-202ENST00000396133 SPDYE6P0CI01 402 aa16.38■□□□□ 0.21
CCNE2-202ENST00000396133 PKD2Q13563 968 aa16.38■□□□□ 0.21
CCNE2-202ENST00000396133 SPDYE2Q495Y8 402 aa16.38■□□□□ 0.21
CCNE2-202ENST00000396133 DCAF8L2P0C7V8 631 aa16.37■□□□□ 0.21
CCNE2-202ENST00000396133 SSUH2Q9Y2M2 353 aa16.36■□□□□ 0.21
CCNE2-202ENST00000396133 AKT1S1Q96B36 256 aa16.31■□□□□ 0.2
CCNE2-202ENST00000396133 STAG3Q9UJ98 1225 aa16.31■□□□□ 0.2
CCNE2-202ENST00000396133 SPOCK2Q92563 424 aa16.29■□□□□ 0.2
CCNE2-202ENST00000396133 KLHL34Q8N239 644 aa16.28■□□□□ 0.2
CCNE2-202ENST00000396133 PABPN1Q86U42 306 aaKnown RBP eCLIP16.24■□□□□ 0.19
CCNE2-202ENST00000396133 PLCD3Q8N3E9 789 aa16.2■□□□□ 0.18
CCNE2-202ENST00000396133 REM2Q8IYK8 340 aaPredicted RBP16.17■□□□□ 0.18
CCNE2-202ENST00000396133 HAP1P54257 671 aaPredicted RBP16.14■□□□□ 0.17
CCNE2-202ENST00000396133 ECM2O94769 699 aaPredicted RBP16.13■□□□□ 0.17
CCNE2-202ENST00000396133 MIER1Q8N108 512 aa16.08■□□□□ 0.16
CCNE2-202ENST00000396133 PITPNM1O00562 1244 aa16■□□□□ 0.15
CCNE2-202ENST00000396133 PIP4P2Q8N4L2 257 aa16■□□□□ 0.15
CCNE2-202ENST00000396133 PLEKHG5O94827 1062 aa15.99■□□□□ 0.15
CCNE2-202ENST00000396133 ZBTB47Q9UFB7 747 aaPredicted RBP15.98■□□□□ 0.15
CCNE2-202ENST00000396133 BBXQ8WY36 941 aaPredicted RBP15.97■□□□□ 0.15
CCNE2-202ENST00000396133 RGL2O15211 777 aa15.96■□□□□ 0.15
CCNE2-202ENST00000396133 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.96■□□□□ 0.15
CCNE2-202ENST00000396133 NPM1P06748 294 aaKnown RBP eCLIP15.92■□□□□ 0.14
CCNE2-202ENST00000396133 FXR2P51116 673 aaKnown RBP eCLIP15.89■□□□□ 0.13
CCNE2-202ENST00000396133 VSIG10Q8N0Z9 540 aa15.88■□□□□ 0.13
CCNE2-202ENST00000396133 CIZ1Q9ULV3 898 aaPredicted RBP15.88■□□□□ 0.13
CCNE2-202ENST00000396133 PAXIP1Q6ZW49 1069 aaPredicted RBP15.83■□□□□ 0.12
CCNE2-202ENST00000396133 SP7Q8TDD2 431 aaPredicted RBP15.81■□□□□ 0.12
CCNE2-202ENST00000396133 TRIM41Q8WV44 630 aa15.8■□□□□ 0.12
CCNE2-202ENST00000396133 CFAP44Q96MT7 982 aa15.79■□□□□ 0.12
CCNE2-202ENST00000396133 BCANQ96GW7 911 aa15.78■□□□□ 0.12
CCNE2-202ENST00000396133 CHGAP10645 457 aaKnown RBP15.72■□□□□ 0.11
CCNE2-202ENST00000396133 HAX1O00165 279 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms