RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 DCAF8L2P0C7V8 631 aa29.81■■■□□ 2.36
UBFD1-201ENST00000395878 NISCHQ9Y2I1 1504 aa28.52■■■□□ 2.16
UBFD1-201ENST00000395878 SUPT5HO00267 1087 aaKnown RBP28.48■■■□□ 2.15
UBFD1-201ENST00000395878 SHROOM4Q9ULL8 1493 aa27.88■■■□□ 2.05
UBFD1-201ENST00000395878 EHMT2Q96KQ7 1210 aa27.45■■□□□ 1.98
UBFD1-201ENST00000395878 PELP1Q8IZL8 1130 aaKnown RBP27.38■■□□□ 1.97
UBFD1-201ENST00000395878 APLP2Q06481 763 aa27.23■■□□□ 1.95
UBFD1-201ENST00000395878 FAM9AQ8IZU1 332 aaPredicted RBP26.85■■□□□ 1.89
UBFD1-201ENST00000395878 PCGF6Q9BYE7 350 aa26.73■■□□□ 1.87
UBFD1-201ENST00000395878 TTBK1Q5TCY1 1321 aaPredicted RBP26.59■■□□□ 1.85
UBFD1-201ENST00000395878 ZEB1P37275 1124 aaPredicted RBP26.52■■□□□ 1.84
UBFD1-201ENST00000395878 TRIM41Q8WV44 630 aa26.45■■□□□ 1.82
UBFD1-201ENST00000395878 CENPBP07199 599 aaPredicted RBP26.43■■□□□ 1.82
UBFD1-201ENST00000395878 CCER1Q8TC90 406 aaPredicted RBP26.32■■□□□ 1.8
UBFD1-201ENST00000395878 RANGAP1P46060 587 aaPredicted RBP26.28■■□□□ 1.8
UBFD1-201ENST00000395878 ERICH6Q7L0X2 663 aa26.14■■□□□ 1.78
UBFD1-201ENST00000395878 UBTFP17480 764 aaKnown RBP26.13■■□□□ 1.77
UBFD1-201ENST00000395878 ATP1B4Q9UN42 357 aaPredicted RBP26.1■■□□□ 1.77
UBFD1-201ENST00000395878 NEFLP07196 543 aa25.85■■□□□ 1.73
UBFD1-201ENST00000395878 YTHDC1Q96MU7 727 aaKnown RBP25.7■■□□□ 1.7
UBFD1-201ENST00000395878 TRIM26Q12899 539 aaPredicted RBP25.68■■□□□ 1.7
UBFD1-201ENST00000395878 PPARGC1BQ86YN6 1023 aaKnown RBP25.58■■□□□ 1.69
UBFD1-201ENST00000395878 MYT1Q01538 1121 aa25.53■■□□□ 1.68
UBFD1-201ENST00000395878 HRCP23327 699 aa25.41■■□□□ 1.66
UBFD1-201ENST00000395878 CHIC1Q5VXU3 224 aa25.29■■□□□ 1.64
UBFD1-201ENST00000395878 ITGAEP38570 1179 aa25.26■■□□□ 1.63
UBFD1-201ENST00000395878 LOC105371045A0A1W2PR82 267 aa25.23■■□□□ 1.63
UBFD1-201ENST00000395878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.18■■□□□ 1.62
UBFD1-201ENST00000395878 HNRNPUL2Q1KMD3 747 aaKnown RBP25.18■■□□□ 1.62
UBFD1-201ENST00000395878 POLR3GLQ9BT43 218 aa25.09■■□□□ 1.61
UBFD1-201ENST00000395878 MYT1LQ9UL68 1186 aa25.08■■□□□ 1.6
UBFD1-201ENST00000395878 DAXXQ9UER7 740 aaPredicted RBP25.07■■□□□ 1.6
UBFD1-201ENST00000395878 DIEXFQ68CQ4 756 aaKnown RBP24.79■■□□□ 1.56
UBFD1-201ENST00000395878 CNGB1Q14028 1251 aaPredicted RBP24.77■■□□□ 1.56
UBFD1-201ENST00000395878 FAM50AQ14320 339 aaKnown RBP24.66■■□□□ 1.54
UBFD1-201ENST00000395878 SLC4A1APQ9BWU0 796 aaKnown RBP24.59■■□□□ 1.53
UBFD1-201ENST00000395878 TRIM52Q96A61 297 aa24.54■■□□□ 1.52
UBFD1-201ENST00000395878 RTL5Q5HYW3 569 aaPredicted RBP24.51■■□□□ 1.51
UBFD1-201ENST00000395878 CLSPNQ9HAW4 1339 aa24.5■■□□□ 1.51
UBFD1-201ENST00000395878 ZNF316A6NFI3 1004 aaPredicted RBP24.48■■□□□ 1.51
UBFD1-201ENST00000395878 NEUROD1Q13562 356 aa24.45■■□□□ 1.5
UBFD1-201ENST00000395878 PABPN1Q86U42 306 aaKnown RBP eCLIP24.44■■□□□ 1.5
UBFD1-201ENST00000395878 ABCC9O60706 1549 aa24.44■■□□□ 1.5
UBFD1-201ENST00000395878 ANP32CO43423 234 aa24.35■■□□□ 1.49
UBFD1-201ENST00000395878 GTF3C3Q9Y5Q9 886 aa24.25■■□□□ 1.47
UBFD1-201ENST00000395878 ZNF326Q5BKZ1 582 aaKnown RBP24.22■■□□□ 1.47
UBFD1-201ENST00000395878 BCANQ96GW7 911 aa24.2■■□□□ 1.46
UBFD1-201ENST00000395878 CDK11AQ9UQ88 783 aaPredicted RBP24.17■■□□□ 1.46
UBFD1-201ENST00000395878 CSRNP3Q8WYN3 585 aa24.12■■□□□ 1.45
UBFD1-201ENST00000395878 ZBTB47Q9UFB7 747 aaPredicted RBP24.06■■□□□ 1.44
UBFD1-201ENST00000395878 FBLN2P98095 1184 aa24.05■■□□□ 1.44
UBFD1-201ENST00000395878 P3H3Q8IVL6 736 aa23.96■■□□□ 1.43
UBFD1-201ENST00000395878 ACIN1Q9UKV3 1341 aaKnown RBP23.95■■□□□ 1.42
UBFD1-201ENST00000395878 CANXP27824 592 aaKnown RBP23.94■■□□□ 1.42
UBFD1-201ENST00000395878 NEFMP07197 916 aa23.89■■□□□ 1.41
UBFD1-201ENST00000395878 ARID3CA6NKF2 412 aa23.83■■□□□ 1.41
UBFD1-201ENST00000395878 ZNF777Q9ULD5 760 aaPredicted RBP23.8■■□□□ 1.4
UBFD1-201ENST00000395878 ANP32AP39687 249 aaKnown RBP23.78■■□□□ 1.4
UBFD1-201ENST00000395878 TONSLQ96HA7 1378 aa23.73■■□□□ 1.39
UBFD1-201ENST00000395878 SLC24A1O60721 1099 aa23.71■■□□□ 1.39
UBFD1-201ENST00000395878 DCAF1Q9Y4B6 1507 aa23.71■■□□□ 1.39
UBFD1-201ENST00000395878 SCRIBQ14160 1630 aa23.66■■□□□ 1.38
UBFD1-201ENST00000395878 BCL11AQ9H165 835 aa23.65■■□□□ 1.38
UBFD1-201ENST00000395878 ZCCHC6Q5VYS8 1495 aaKnown RBP23.6■■□□□ 1.37
UBFD1-201ENST00000395878 FKBP8Q14318 412 aa23.59■■□□□ 1.37
UBFD1-201ENST00000395878 NPM2Q86SE8 214 aaKnown RBP23.55■■□□□ 1.36
UBFD1-201ENST00000395878 HNRNPUQ00839 825 aaKnown RBP eCLIP23.55■■□□□ 1.36
UBFD1-201ENST00000395878 DDX10Q13206 875 aaKnown RBP23.52■■□□□ 1.36
UBFD1-201ENST00000395878 ESF1Q9H501 851 aaKnown RBP23.47■■□□□ 1.35
UBFD1-201ENST00000395878 FAM9BQ8IZU0 186 aa23.46■■□□□ 1.35
UBFD1-201ENST00000395878 CHGAP10645 457 aaKnown RBP23.45■■□□□ 1.34
UBFD1-201ENST00000395878 UPF2Q9HAU5 1272 aaKnown RBP23.42■■□□□ 1.34
UBFD1-201ENST00000395878 STAG3Q9UJ98 1225 aa23.4■■□□□ 1.34
UBFD1-201ENST00000395878 TMC1Q8TDI8 760 aa23.37■■□□□ 1.33
UBFD1-201ENST00000395878 ANP32BQ92688 251 aaKnown RBP23.37■■□□□ 1.33
UBFD1-201ENST00000395878 CHIC2Q9UKJ5 165 aa23.37■■□□□ 1.33
UBFD1-201ENST00000395878 HSP90AA1P07900 732 aaKnown RBP23.37■■□□□ 1.33
UBFD1-201ENST00000395878 NPM1P06748 294 aaKnown RBP eCLIP23.34■■□□□ 1.33
UBFD1-201ENST00000395878 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.33■■□□□ 1.33
UBFD1-201ENST00000395878 MTUS2Q5JR59 1369 aa23.31■■□□□ 1.32
UBFD1-201ENST00000395878 CCDC136Q96JN2 1154 aa23.31■■□□□ 1.32
UBFD1-201ENST00000395878 TSPY4P0CV99 314 aa23.3■■□□□ 1.32
UBFD1-201ENST00000395878 TSPY10P0CW01 314 aa23.3■■□□□ 1.32
UBFD1-201ENST00000395878 SALL2Q9Y467 1007 aaPredicted RBP23.28■■□□□ 1.32
UBFD1-201ENST00000395878 CLIP1P30622 1438 aa23.28■■□□□ 1.32
UBFD1-201ENST00000395878 MRS2Q9HD23 443 aa23.27■■□□□ 1.32
UBFD1-201ENST00000395878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.27■■□□□ 1.325e-12■□□□□ 11.1
UBFD1-201ENST00000395878 WDR43Q15061 677 aaKnown RBP eCLIP23.26■■□□□ 1.31
UBFD1-201ENST00000395878 KDM2AQ9Y2K7 1162 aa23.18■■□□□ 1.3
UBFD1-201ENST00000395878 CCDC180Q9P1Z9 1646 aa23.18■■□□□ 1.3
UBFD1-201ENST00000395878 EEA1Q15075 1411 aa23.17■■□□□ 1.3
UBFD1-201ENST00000395878 MIER1Q8N108 512 aa23.16■■□□□ 1.3
UBFD1-201ENST00000395878 EIF4G2P78344 907 aaKnown RBP eCLIP23.16■■□□□ 1.3
UBFD1-201ENST00000395878 SCAF1Q9H7N4 1312 aaKnown RBP23.14■■□□□ 1.29
UBFD1-201ENST00000395878 GOLGA3Q08378 1498 aa23.11■■□□□ 1.29
UBFD1-201ENST00000395878 CHMP7Q8WUX9 453 aaPredicted RBP23.09■■□□□ 1.29
UBFD1-201ENST00000395878 EIF5BO60841 1220 aaKnown RBP23.09■■□□□ 1.29
UBFD1-201ENST00000395878 RSF1Q96T23 1441 aaPredicted RBP23.09■■□□□ 1.29
UBFD1-201ENST00000395878 CEP162Q5TB80 1403 aa23.05■■□□□ 1.28
UBFD1-201ENST00000395878 RRP7BPQ9NSQ0 103 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms