RNA–Protein interactions for RNA: ENST00000395809.5

RASGEF1A-203, Transcript of RasGEF domain family member 1A, humanhuman

APPRIS P3 TSL 2 BASIC

Gene RASGEF1A, Length 4,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1A-203ENST00000395809 NISCHQ9Y2I1 1504 aa24.97■■□□□ 1.59
RASGEF1A-203ENST00000395809 DCAF8L2P0C7V8 631 aa22.2■■□□□ 1.14
RASGEF1A-203ENST00000395809 SHROOM4Q9ULL8 1493 aa22.04■■□□□ 1.12
RASGEF1A-203ENST00000395809 SUPT5HO00267 1087 aaKnown RBP21.78■■□□□ 1.08
RASGEF1A-203ENST00000395809 CCDC180Q9P1Z9 1646 aa20.97■□□□□ 0.95
RASGEF1A-203ENST00000395809 ZCCHC6Q5VYS8 1495 aaKnown RBP20.96■□□□□ 0.95
RASGEF1A-203ENST00000395809 CHIC1Q5VXU3 224 aa20.55■□□□□ 0.88
RASGEF1A-203ENST00000395809 ABCC9O60706 1549 aa20.37■□□□□ 0.85
RASGEF1A-203ENST00000395809 EHMT2Q96KQ7 1210 aa20.3■□□□□ 0.84
RASGEF1A-203ENST00000395809 FAM9AQ8IZU1 332 aaPredicted RBP20.26■□□□□ 0.83
RASGEF1A-203ENST00000395809 TRIM41Q8WV44 630 aa20.23■□□□□ 0.83
RASGEF1A-203ENST00000395809 PCGF6Q9BYE7 350 aa20.23■□□□□ 0.83
RASGEF1A-203ENST00000395809 DCAF1Q9Y4B6 1507 aa20.21■□□□□ 0.83
RASGEF1A-203ENST00000395809 LOC105371045A0A1W2PR82 267 aa20.13■□□□□ 0.81
RASGEF1A-203ENST00000395809 SCRIBQ14160 1630 aa20.13■□□□□ 0.81
RASGEF1A-203ENST00000395809 MYO15BQ96JP2 1530 aa19.93■□□□□ 0.78
RASGEF1A-203ENST00000395809 RSF1Q96T23 1441 aaPredicted RBP19.82■□□□□ 0.76
RASGEF1A-203ENST00000395809 HRCP23327 699 aa19.78■□□□□ 0.76
RASGEF1A-203ENST00000395809 NACADO15069 1562 aa19.75■□□□□ 0.75
RASGEF1A-203ENST00000395809 PABPN1Q86U42 306 aaKnown RBP eCLIP19.72■□□□□ 0.75
RASGEF1A-203ENST00000395809 TRIM26Q12899 539 aaPredicted RBP19.7■□□□□ 0.74
RASGEF1A-203ENST00000395809 TTBK1Q5TCY1 1321 aaPredicted RBP19.59■□□□□ 0.73
RASGEF1A-203ENST00000395809 RB1CC1Q8TDY2 1594 aa19.58■□□□□ 0.73
RASGEF1A-203ENST00000395809 CECR2Q9BXF3 1484 aa19.58■□□□□ 0.72
RASGEF1A-203ENST00000395809 PPARGC1BQ86YN6 1023 aaKnown RBP19.57■□□□□ 0.72
RASGEF1A-203ENST00000395809 UBTFP17480 764 aaKnown RBP19.51■□□□□ 0.71
RASGEF1A-203ENST00000395809 MROH2BQ7Z745 1585 aa19.42■□□□□ 0.7
RASGEF1A-203ENST00000395809 ZEB1P37275 1124 aaPredicted RBP19.41■□□□□ 0.7
RASGEF1A-203ENST00000395809 RANGAP1P46060 587 aaPredicted RBP19.37■□□□□ 0.69
RASGEF1A-203ENST00000395809 APLP2Q06481 763 aa19.33■□□□□ 0.69
RASGEF1A-203ENST00000395809 BAZ1AQ9NRL2 1556 aaPredicted RBP19.31■□□□□ 0.68
RASGEF1A-203ENST00000395809 CCER1Q8TC90 406 aaPredicted RBP19.29■□□□□ 0.68
RASGEF1A-203ENST00000395809 WIZO95785 1651 aa19.22■□□□□ 0.67
RASGEF1A-203ENST00000395809 CSRNP3Q8WYN3 585 aa19.14■□□□□ 0.65
RASGEF1A-203ENST00000395809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.06■□□□□ 0.64
RASGEF1A-203ENST00000395809 CCDC88BA6NC98 1476 aa19.03■□□□□ 0.64
RASGEF1A-203ENST00000395809 TOP2AP11388 1531 aaKnown RBP18.98■□□□□ 0.63
RASGEF1A-203ENST00000395809 SMARCA4P51532 1647 aa18.96■□□□□ 0.63
RASGEF1A-203ENST00000395809 ABCC8Q09428 1581 aa18.95■□□□□ 0.62
RASGEF1A-203ENST00000395809 HNRNPUL2Q1KMD3 747 aaKnown RBP18.91■□□□□ 0.62
RASGEF1A-203ENST00000395809 WRNQ14191 1432 aaPredicted RBP eCLIP18.9■□□□□ 0.62
RASGEF1A-203ENST00000395809 BAZ1BQ9UIG0 1483 aaKnown RBP18.9■□□□□ 0.62
RASGEF1A-203ENST00000395809 SOGA1O94964 1423 aa18.87■□□□□ 0.61
RASGEF1A-203ENST00000395809 EEA1Q15075 1411 aa18.84■□□□□ 0.61
RASGEF1A-203ENST00000395809 CEP162Q5TB80 1403 aa18.84■□□□□ 0.61
RASGEF1A-203ENST00000395809 ATP1B4Q9UN42 357 aaPredicted RBP18.81■□□□□ 0.6
RASGEF1A-203ENST00000395809 SMARCA2P51531 1590 aa18.77■□□□□ 0.6
RASGEF1A-203ENST00000395809 TNIKQ9UKE5 1360 aa18.77■□□□□ 0.59
RASGEF1A-203ENST00000395809 GOLGA3Q08378 1498 aa18.75■□□□□ 0.59
RASGEF1A-203ENST00000395809 ATAD2BQ9ULI0 1458 aa18.71■□□□□ 0.58
RASGEF1A-203ENST00000395809 ITGAEP38570 1179 aa18.67■□□□□ 0.58
RASGEF1A-203ENST00000395809 CLIP1P30622 1438 aa18.66■□□□□ 0.58
RASGEF1A-203ENST00000395809 RUSC2Q8N2Y8 1516 aa18.63■□□□□ 0.57
RASGEF1A-203ENST00000395809 CEP164Q9UPV0 1460 aa18.63■□□□□ 0.57
RASGEF1A-203ENST00000395809 CENPBP07199 599 aaPredicted RBP18.59■□□□□ 0.57
RASGEF1A-203ENST00000395809 DIEXFQ68CQ4 756 aaKnown RBP18.58■□□□□ 0.57
RASGEF1A-203ENST00000395809 BICRAQ9NZM4 1560 aa18.58■□□□□ 0.56
RASGEF1A-203ENST00000395809 UNC13AQ9UPW8 1703 aa18.56■□□□□ 0.56
RASGEF1A-203ENST00000395809 YTHDC1Q96MU7 727 aaKnown RBP18.48■□□□□ 0.55
RASGEF1A-203ENST00000395809 P3H3Q8IVL6 736 aa18.45■□□□□ 0.54
RASGEF1A-203ENST00000395809 KIF27Q86VH2 1401 aa18.45■□□□□ 0.54
RASGEF1A-203ENST00000395809 ZNF316A6NFI3 1004 aaPredicted RBP18.39■□□□□ 0.54
RASGEF1A-203ENST00000395809 RAPGEF2Q9Y4G8 1499 aa18.38■□□□□ 0.53
RASGEF1A-203ENST00000395809 FAM50AQ14320 339 aaKnown RBP18.38■□□□□ 0.53
RASGEF1A-203ENST00000395809 EIF4G1Q04637 1599 aaKnown RBP18.37■□□□□ 0.53
RASGEF1A-203ENST00000395809 VPS8Q8N3P4 1428 aa18.37■□□□□ 0.53
RASGEF1A-203ENST00000395809 SYNJ1O43426 1573 aa18.36■□□□□ 0.53
RASGEF1A-203ENST00000395809 PEG3Q9GZU2 1588 aa18.31■□□□□ 0.52
RASGEF1A-203ENST00000395809 NCAPD3P42695 1498 aa18.31■□□□□ 0.52
RASGEF1A-203ENST00000395809 CUX2O14529 1486 aa18.28■□□□□ 0.52
RASGEF1A-203ENST00000395809 CADPSQ9ULU8 1353 aa18.23■□□□□ 0.51
RASGEF1A-203ENST00000395809 CARMIL1Q5VZK9 1371 aa18.19■□□□□ 0.5
RASGEF1A-203ENST00000395809 KANK4Q5T7N3 995 aaPredicted RBP18.19■□□□□ 0.5
RASGEF1A-203ENST00000395809 KIF21BO75037 1637 aa18.17■□□□□ 0.5
RASGEF1A-203ENST00000395809 NEUROD1Q13562 356 aa18.17■□□□□ 0.5
RASGEF1A-203ENST00000395809 ACIN1Q9UKV3 1341 aaKnown RBP18.15■□□□□ 0.5
RASGEF1A-203ENST00000395809 HMGXB3Q12766 1538 aa18.15■□□□□ 0.5
RASGEF1A-203ENST00000395809 TOP2BQ02880 1626 aa18.13■□□□□ 0.49
RASGEF1A-203ENST00000395809 CFTRP13569 1480 aa18.12■□□□□ 0.49
RASGEF1A-203ENST00000395809 GTF3C3Q9Y5Q9 886 aa18.09■□□□□ 0.49
RASGEF1A-203ENST00000395809 CUX1P39880 1505 aa18.06■□□□□ 0.48
RASGEF1A-203ENST00000395809 ARID3CA6NKF2 412 aa18.06■□□□□ 0.48
RASGEF1A-203ENST00000395809 CCNB3Q8WWL7 1395 aa18.05■□□□□ 0.48
RASGEF1A-203ENST00000395809 SCAF1Q9H7N4 1312 aaKnown RBP18.05■□□□□ 0.48
RASGEF1A-203ENST00000395809 PRXQ9BXM0 1461 aa18.03■□□□□ 0.48
RASGEF1A-203ENST00000395809 IGF1RP08069 1367 aa18.03■□□□□ 0.48
RASGEF1A-203ENST00000395809 FANCD2Q9BXW9 1451 aa18.02■□□□□ 0.48
RASGEF1A-203ENST00000395809 MIER1Q8N108 512 aa18.01■□□□□ 0.47
RASGEF1A-203ENST00000395809 FGD5Q6ZNL6 1462 aa18.01■□□□□ 0.47
RASGEF1A-203ENST00000395809 PELP1Q8IZL8 1130 aaKnown RBP18■□□□□ 0.47
RASGEF1A-203ENST00000395809 ERICH3Q5RHP9 1530 aa17.99■□□□□ 0.47
RASGEF1A-203ENST00000395809 MTUS2Q5JR59 1369 aa17.99■□□□□ 0.47
RASGEF1A-203ENST00000395809 FHAD1B1AJZ9 1412 aa17.98■□□□□ 0.47
RASGEF1A-203ENST00000395809 FBLN2P98095 1184 aa17.97■□□□□ 0.47
RASGEF1A-203ENST00000395809 TRIM52Q96A61 297 aa17.96■□□□□ 0.47
RASGEF1A-203ENST00000395809 CLSPNQ9HAW4 1339 aa17.95■□□□□ 0.46
RASGEF1A-203ENST00000395809 TDRD9Q8NDG6 1382 aaKnown RBP17.95■□□□□ 0.46
RASGEF1A-203ENST00000395809 ARAP1Q96P48 1450 aa17.95■□□□□ 0.46
RASGEF1A-203ENST00000395809 CC2D2AQ9P2K1 1620 aa17.91■□□□□ 0.46
RASGEF1A-203ENST00000395809 RAD54L2Q9Y4B4 1467 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms