RNA–Protein interactions for RNA: ENST00000395226.6

GPAT3-202, Transcript of glycerol-3-phosphate acyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPAT3, Length 2,631 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAT3-202ENST00000395226 NISCHQ9Y2I1 1504 aa35.64■■■■□ 3.3
GPAT3-202ENST00000395226 SHROOM4Q9ULL8 1493 aa30.83■■■□□ 2.53
GPAT3-202ENST00000395226 SUPT5HO00267 1087 aaKnown RBP30.29■■■□□ 2.44
GPAT3-202ENST00000395226 ZCCHC6Q5VYS8 1495 aaKnown RBP30.15■■■□□ 2.42
GPAT3-202ENST00000395226 CCDC180Q9P1Z9 1646 aa30.1■■■□□ 2.41
GPAT3-202ENST00000395226 DCAF8L2P0C7V8 631 aa29.88■■■□□ 2.37
GPAT3-202ENST00000395226 CHIC1Q5VXU3 224 aa29.39■■■□□ 2.29
GPAT3-202ENST00000395226 MYO15BQ96JP2 1530 aa29.36■■■□□ 2.29
GPAT3-202ENST00000395226 DCAF1Q9Y4B6 1507 aa29.07■■■□□ 2.24
GPAT3-202ENST00000395226 HRCP23327 699 aa28.79■■■□□ 2.2
GPAT3-202ENST00000395226 PCGF6Q9BYE7 350 aa28.74■■■□□ 2.19
GPAT3-202ENST00000395226 LOC105371045A0A1W2PR82 267 aa28.67■■■□□ 2.18
GPAT3-202ENST00000395226 SCRIBQ14160 1630 aa28.5■■■□□ 2.15
GPAT3-202ENST00000395226 ABCC9O60706 1549 aa28.48■■■□□ 2.15
GPAT3-202ENST00000395226 RSF1Q96T23 1441 aaPredicted RBP28.33■■■□□ 2.13
GPAT3-202ENST00000395226 PPARGC1BQ86YN6 1023 aaKnown RBP28.31■■■□□ 2.12
GPAT3-202ENST00000395226 RB1CC1Q8TDY2 1594 aa28.1■■■□□ 2.09
GPAT3-202ENST00000395226 TRIM41Q8WV44 630 aa28.09■■■□□ 2.09
GPAT3-202ENST00000395226 FAM9AQ8IZU1 332 aaPredicted RBP28.05■■■□□ 2.08
GPAT3-202ENST00000395226 TRIM26Q12899 539 aaPredicted RBP28.01■■■□□ 2.07
GPAT3-202ENST00000395226 EHMT2Q96KQ7 1210 aa27.94■■■□□ 2.06
GPAT3-202ENST00000395226 CECR2Q9BXF3 1484 aa27.93■■■□□ 2.06
GPAT3-202ENST00000395226 NACADO15069 1562 aa27.83■■■□□ 2.05
GPAT3-202ENST00000395226 MROH2BQ7Z745 1585 aa27.81■■■□□ 2.04
GPAT3-202ENST00000395226 WIZO95785 1651 aa27.68■■■□□ 2.02
GPAT3-202ENST00000395226 BAZ1AQ9NRL2 1556 aaPredicted RBP27.39■■□□□ 1.98
GPAT3-202ENST00000395226 ZEB1P37275 1124 aaPredicted RBP27.37■■□□□ 1.97
GPAT3-202ENST00000395226 EIF4G1Q04637 1599 aaKnown RBP27.24■■□□□ 1.95
GPAT3-202ENST00000395226 ABCC8Q09428 1581 aa27.18■■□□□ 1.94
GPAT3-202ENST00000395226 TOP2AP11388 1531 aaKnown RBP27.13■■□□□ 1.93
GPAT3-202ENST00000395226 SMARCA4P51532 1647 aa27.12■■□□□ 1.93
GPAT3-202ENST00000395226 CCDC88BA6NC98 1476 aa27.12■■□□□ 1.93
GPAT3-202ENST00000395226 UNC13AQ9UPW8 1703 aa27.07■■□□□ 1.92
GPAT3-202ENST00000395226 TTBK1Q5TCY1 1321 aaPredicted RBP27.05■■□□□ 1.92
GPAT3-202ENST00000395226 SMARCA2P51531 1590 aa27.03■■□□□ 1.92
GPAT3-202ENST00000395226 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.03■■□□□ 1.92
GPAT3-202ENST00000395226 PABPN1Q86U42 306 aaKnown RBP eCLIP26.97■■□□□ 1.91
GPAT3-202ENST00000395226 SOGA1O94964 1423 aa26.95■■□□□ 1.9
GPAT3-202ENST00000395226 CCER1Q8TC90 406 aaPredicted RBP26.91■■□□□ 1.9
GPAT3-202ENST00000395226 SCAF1Q9H7N4 1312 aaKnown RBP26.9■■□□□ 1.9
GPAT3-202ENST00000395226 CEP162Q5TB80 1403 aa26.84■■□□□ 1.89
GPAT3-202ENST00000395226 RUSC2Q8N2Y8 1516 aa26.84■■□□□ 1.89
GPAT3-202ENST00000395226 UBTFP17480 764 aaKnown RBP26.78■■□□□ 1.88
GPAT3-202ENST00000395226 PELP1Q8IZL8 1130 aaKnown RBP26.76■■□□□ 1.87
GPAT3-202ENST00000395226 CSRNP3Q8WYN3 585 aa26.76■■□□□ 1.87
GPAT3-202ENST00000395226 WRNQ14191 1432 aaPredicted RBP eCLIP26.72■■□□□ 1.87
GPAT3-202ENST00000395226 TNIKQ9UKE5 1360 aa26.71■■□□□ 1.87
GPAT3-202ENST00000395226 BICRAQ9NZM4 1560 aa26.71■■□□□ 1.87
GPAT3-202ENST00000395226 EEA1Q15075 1411 aa26.61■■□□□ 1.85
GPAT3-202ENST00000395226 GOLGA3Q08378 1498 aa26.54■■□□□ 1.84
GPAT3-202ENST00000395226 SYNJ1O43426 1573 aa26.49■■□□□ 1.83
GPAT3-202ENST00000395226 PEG3Q9GZU2 1588 aa26.46■■□□□ 1.83
GPAT3-202ENST00000395226 ACIN1Q9UKV3 1341 aaKnown RBP26.43■■□□□ 1.82
GPAT3-202ENST00000395226 DIEXFQ68CQ4 756 aaKnown RBP26.42■■□□□ 1.82
GPAT3-202ENST00000395226 NEUROD1Q13562 356 aa26.41■■□□□ 1.82
GPAT3-202ENST00000395226 ATAD2BQ9ULI0 1458 aa26.4■■□□□ 1.82
GPAT3-202ENST00000395226 RANGAP1P46060 587 aaPredicted RBP26.4■■□□□ 1.82
GPAT3-202ENST00000395226 BAZ1BQ9UIG0 1483 aaKnown RBP26.37■■□□□ 1.81
GPAT3-202ENST00000395226 CEP164Q9UPV0 1460 aa26.36■■□□□ 1.81
GPAT3-202ENST00000395226 HNRNPUL2Q1KMD3 747 aaKnown RBP26.34■■□□□ 1.81
GPAT3-202ENST00000395226 CLIP1P30622 1438 aa26.31■■□□□ 1.8
GPAT3-202ENST00000395226 KIF21BO75037 1637 aa26.28■■□□□ 1.8
GPAT3-202ENST00000395226 RAPGEF2Q9Y4G8 1499 aa26.25■■□□□ 1.79
GPAT3-202ENST00000395226 GTF3C3Q9Y5Q9 886 aa26.2■■□□□ 1.78
GPAT3-202ENST00000395226 CENPBP07199 599 aaPredicted RBP26.18■■□□□ 1.78
GPAT3-202ENST00000395226 VPS8Q8N3P4 1428 aa26.16■■□□□ 1.78
GPAT3-202ENST00000395226 APLP2Q06481 763 aa26.15■■□□□ 1.78
GPAT3-202ENST00000395226 ZNF316A6NFI3 1004 aaPredicted RBP26.15■■□□□ 1.78
GPAT3-202ENST00000395226 TOP2BQ02880 1626 aa26.06■■□□□ 1.76
GPAT3-202ENST00000395226 YTHDC1Q96MU7 727 aaKnown RBP25.97■■□□□ 1.75
GPAT3-202ENST00000395226 BIVM-ERCC5R4GMW8 1640 aa25.93■■□□□ 1.74
GPAT3-202ENST00000395226 MIER1Q8N108 512 aa25.89■■□□□ 1.74
GPAT3-202ENST00000395226 PRXQ9BXM0 1461 aa25.87■■□□□ 1.73
GPAT3-202ENST00000395226 CUX1P39880 1505 aa25.86■■□□□ 1.73
GPAT3-202ENST00000395226 KANK4Q5T7N3 995 aaPredicted RBP25.85■■□□□ 1.73
GPAT3-202ENST00000395226 ARAP1Q96P48 1450 aa25.85■■□□□ 1.73
GPAT3-202ENST00000395226 ERICH3Q5RHP9 1530 aa25.81■■□□□ 1.72
GPAT3-202ENST00000395226 NCAPD3P42695 1498 aa25.8■■□□□ 1.72
GPAT3-202ENST00000395226 HMGXB3Q12766 1538 aa25.76■■□□□ 1.71
GPAT3-202ENST00000395226 KIF27Q86VH2 1401 aa25.74■■□□□ 1.71
GPAT3-202ENST00000395226 DHX57Q6P158 1386 aaKnown RBP25.68■■□□□ 1.7
GPAT3-202ENST00000395226 CFTRP13569 1480 aa25.67■■□□□ 1.7
GPAT3-202ENST00000395226 ITGAEP38570 1179 aa25.64■■□□□ 1.7
GPAT3-202ENST00000395226 ARHGAP35Q9NRY4 1499 aa25.6■■□□□ 1.69
GPAT3-202ENST00000395226 CUX2O14529 1486 aa25.54■■□□□ 1.68
GPAT3-202ENST00000395226 RRBP1Q9P2E9 1410 aaKnown RBP25.54■■□□□ 1.68
GPAT3-202ENST00000395226 CLSPNQ9HAW4 1339 aa25.52■■□□□ 1.68
GPAT3-202ENST00000395226 CCNB3Q8WWL7 1395 aa25.5■■□□□ 1.67
GPAT3-202ENST00000395226 MYT1Q01538 1121 aa25.5■■□□□ 1.67
GPAT3-202ENST00000395226 IGF1RP08069 1367 aa25.49■■□□□ 1.67
GPAT3-202ENST00000395226 P3H3Q8IVL6 736 aa25.39■■□□□ 1.66
GPAT3-202ENST00000395226 CARMIL1Q5VZK9 1371 aa25.39■■□□□ 1.66
GPAT3-202ENST00000395226 CADPSQ9ULU8 1353 aa25.39■■□□□ 1.65
GPAT3-202ENST00000395226 FGD5Q6ZNL6 1462 aa25.38■■□□□ 1.65
GPAT3-202ENST00000395226 PRDM2Q13029 1718 aa25.38■■□□□ 1.65
GPAT3-202ENST00000395226 ATP1B4Q9UN42 357 aaPredicted RBP25.34■■□□□ 1.65
GPAT3-202ENST00000395226 RAB3GAP2Q9H2M9 1393 aa25.33■■□□□ 1.65
GPAT3-202ENST00000395226 TIAM1Q13009 1591 aa25.31■■□□□ 1.64
GPAT3-202ENST00000395226 FAM50AQ14320 339 aaKnown RBP25.28■■□□□ 1.64
GPAT3-202ENST00000395226 PHLDB1Q86UU1 1377 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms