RNA–Protein interactions for RNA: ENST00000394620.1

CCL8-201, Transcript of C-C motif chemokine ligand 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL8, Length 1,261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL8-201ENST00000394620 AEBP2Q6ZN18 517 aaPredicted RBP40.03■■■■■ 4
CCL8-201ENST00000394620 CHIC1Q5VXU3 224 aa37.81■■■■□ 3.64
CCL8-201ENST00000394620 SENP3Q9H4L4 574 aaPredicted RBP34.24■■■■□ 3.07
CCL8-201ENST00000394620 PHF23Q9BUL5 403 aaPredicted RBP33.72■■■□□ 2.99
CCL8-201ENST00000394620 FOXD1Q16676 465 aa31.9■■■□□ 2.7
CCL8-201ENST00000394620 PLPPR3Q6T4P5 718 aa30.11■■■□□ 2.41
CCL8-201ENST00000394620 MSH5O43196 834 aa30■■■□□ 2.39
CCL8-201ENST00000394620 PIAS4Q8N2W9 510 aaPredicted RBP29.73■■■□□ 2.35
CCL8-201ENST00000394620 POTEDQ86YR6 584 aa29.66■■■□□ 2.34
CCL8-201ENST00000394620 PPP6R1Q9UPN7 881 aa29.62■■■□□ 2.33
CCL8-201ENST00000394620 ADRA2BP18089 450 aa29.5■■■□□ 2.31
CCL8-201ENST00000394620 MAPK8IP2Q13387 824 aaPredicted RBP27.16■■□□□ 1.94
CCL8-201ENST00000394620 DMRT2Q9Y5R5 561 aa27.11■■□□□ 1.93
CCL8-201ENST00000394620 SCAF1Q9H7N4 1312 aaKnown RBP27.06■■□□□ 1.92
CCL8-201ENST00000394620 PPP4R3CPQ6ZMV5 832 aa26.34■■□□□ 1.81
CCL8-201ENST00000394620 HOXD11P31277 338 aaPredicted RBP26.04■■□□□ 1.76
CCL8-201ENST00000394620 CNKSR2Q8WXI2 1034 aa25.93■■□□□ 1.74
CCL8-201ENST00000394620 DCAF8L1A6NGE4 600 aa25.91■■□□□ 1.74
CCL8-201ENST00000394620 CACNB1Q02641 598 aaPredicted RBP25.84■■□□□ 1.73
CCL8-201ENST00000394620 RNF216Q9NWF9 866 aaPredicted RBP25.77■■□□□ 1.72
CCL8-201ENST00000394620 RNF39Q9H2S5 420 aa25.56■■□□□ 1.68
CCL8-201ENST00000394620 NCBP3Q53F19 620 aaKnown RBP25.28■■□□□ 1.64
CCL8-201ENST00000394620 DNAJC5BQ9UF47 199 aa25.27■■□□□ 1.64
CCL8-201ENST00000394620 C1QBPQ07021 282 aaKnown RBP25.2■■□□□ 1.62
CCL8-201ENST00000394620 NPM3O75607 178 aaKnown RBP24.88■■□□□ 1.57
CCL8-201ENST00000394620 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.74■■□□□ 1.55
CCL8-201ENST00000394620 U3KPZ7 1027 aaPredicted RBP24.21■■□□□ 1.47
CCL8-201ENST00000394620 KCNA4P22459 653 aa24.15■■□□□ 1.46
CCL8-201ENST00000394620 SPINK5Q9NQ38 1064 aaPredicted RBP23.91■■□□□ 1.42
CCL8-201ENST00000394620 CAPN15O75808 1086 aa23.87■■□□□ 1.41
CCL8-201ENST00000394620 DSG3P32926 999 aa23.84■■□□□ 1.41
CCL8-201ENST00000394620 SLC4A2P04920 1241 aa23.82■■□□□ 1.4
CCL8-201ENST00000394620 APLP2Q06481 763 aa23.57■■□□□ 1.36
CCL8-201ENST00000394620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.49■■□□□ 1.35
CCL8-201ENST00000394620 HNRNPUL2Q1KMD3 747 aaKnown RBP23.49■■□□□ 1.35
CCL8-201ENST00000394620 ZNF219Q9P2Y4 722 aaPredicted RBP23.44■■□□□ 1.34
CCL8-201ENST00000394620 TRHP20396 242 aaPredicted RBP23.42■■□□□ 1.34
CCL8-201ENST00000394620 SAMD1Q6SPF0 538 aaPredicted RBP23.32■■□□□ 1.32
CCL8-201ENST00000394620 ABCB7O75027 752 aa23.27■■□□□ 1.32
CCL8-201ENST00000394620 POTEHQ6S545 545 aa23.2■■□□□ 1.3
CCL8-201ENST00000394620 MYCNP04198 464 aaPredicted RBP23.04■■□□□ 1.28
CCL8-201ENST00000394620 RBM42Q9BTD8 480 aaKnown RBP22.79■■□□□ 1.24
CCL8-201ENST00000394620 POLA2Q14181 598 aa22.76■■□□□ 1.23
CCL8-201ENST00000394620 SLC4A1APQ9BWU0 796 aaKnown RBP22.76■■□□□ 1.23
CCL8-201ENST00000394620 FOXD4L1Q9NU39 408 aa22.65■■□□□ 1.22
CCL8-201ENST00000394620 ATF5Q9Y2D1 282 aaPredicted RBP22.47■■□□□ 1.19
CCL8-201ENST00000394620 ZBTB12Q9Y330 459 aaPredicted RBP22.35■■□□□ 1.17
CCL8-201ENST00000394620 CHRDL2Q6WN34 429 aa22.34■■□□□ 1.17
CCL8-201ENST00000394620 AKT1S1Q96B36 256 aa22.21■■□□□ 1.15
CCL8-201ENST00000394620 ZBTB22O15209 634 aa22.2■■□□□ 1.14
CCL8-201ENST00000394620 ATXN8OSP0DMR3 200 aa22.04■■□□□ 1.12
CCL8-201ENST00000394620 OSCARQ8IYS5 282 aa22.03■■□□□ 1.12
CCL8-201ENST00000394620 REM2Q8IYK8 340 aaPredicted RBP21.97■■□□□ 1.11
CCL8-201ENST00000394620 PIP4P2Q8N4L2 257 aa21.77■■□□□ 1.08
CCL8-201ENST00000394620 PITPNM1O00562 1244 aa21.72■■□□□ 1.07
CCL8-201ENST00000394620 FBLN2P98095 1184 aa21.65■■□□□ 1.06
CCL8-201ENST00000394620 SP7Q8TDD2 431 aaPredicted RBP21.64■■□□□ 1.05
CCL8-201ENST00000394620 FXR2P51116 673 aaKnown RBP eCLIP21.63■■□□□ 1.05
CCL8-201ENST00000394620 SPDYE2BA6NHP3 402 aa21.62■■□□□ 1.05
CCL8-201ENST00000394620 SPDYE6P0CI01 402 aa21.62■■□□□ 1.05
CCL8-201ENST00000394620 SPDYE2Q495Y8 402 aa21.62■■□□□ 1.05
CCL8-201ENST00000394620 MKRN4PQ13434 485 aaPredicted RBP21.45■■□□□ 1.02
CCL8-201ENST00000394620 HAX1O00165 279 aa21.4■■□□□ 1.02
CCL8-201ENST00000394620 SSUH2Q9Y2M2 353 aa21.31■■□□□ 1
CCL8-201ENST00000394620 SPDYE1Q8NFV5 336 aaPredicted RBP21.29■■□□□ 1
CCL8-201ENST00000394620 ZNF692Q9BU19 519 aaPredicted RBP21.28■■□□□ 1
CCL8-201ENST00000394620 CLEC11AQ9Y240 323 aa21.21■□□□□ 0.99
CCL8-201ENST00000394620 PRKAR2AP13861 404 aaKnown RBP21.16■□□□□ 0.98
CCL8-201ENST00000394620 EVX2Q03828 476 aa21.12■□□□□ 0.97
CCL8-201ENST00000394620 CSRNP3Q8WYN3 585 aa20.96■□□□□ 0.95
CCL8-201ENST00000394620 PABPN1Q86U42 306 aaKnown RBP eCLIP20.95■□□□□ 0.94
CCL8-201ENST00000394620 C19orf67A6NJJ6 358 aa20.94■□□□□ 0.94
CCL8-201ENST00000394620 PRR29P0C7W0 189 aa20.86■□□□□ 0.93
CCL8-201ENST00000394620 CHADLQ6NUI6 762 aa20.83■□□□□ 0.93
CCL8-201ENST00000394620 GABBR2O75899 941 aa20.67■□□□□ 0.9
CCL8-201ENST00000394620 FARP1Q9Y4F1 1045 aaPredicted RBP20.54■□□□□ 0.88
CCL8-201ENST00000394620 EHMT2Q96KQ7 1210 aa20.48■□□□□ 0.87
CCL8-201ENST00000394620 CD44P16070 742 aaKnown RBP20.46■□□□□ 0.87
CCL8-201ENST00000394620 STAG3Q9UJ98 1225 aa20.39■□□□□ 0.85
CCL8-201ENST00000394620 CLCN6P51797 869 aa20.35■□□□□ 0.85
CCL8-201ENST00000394620 SPDYE4A6NLX3 237 aa20.31■□□□□ 0.84
CCL8-201ENST00000394620 CREBZFQ9NS37 354 aa20.29■□□□□ 0.84
CCL8-201ENST00000394620 LHX8Q68G74 356 aa20.28■□□□□ 0.84
CCL8-201ENST00000394620 POTEIP0CG38 1075 aa20.22■□□□□ 0.83
CCL8-201ENST00000394620 ZNF579Q8NAF0 562 aaKnown RBP20.18■□□□□ 0.82
CCL8-201ENST00000394620 ZRANB1Q9UGI0 708 aa20.13■□□□□ 0.81
CCL8-201ENST00000394620 DCBLD2Q96PD2 775 aa20.04■□□□□ 0.8
CCL8-201ENST00000394620 PAK3O75914 559 aaPredicted RBP19.94■□□□□ 0.78
CCL8-201ENST00000394620 MNX1P50219 401 aaPredicted RBP19.94■□□□□ 0.78
CCL8-201ENST00000394620 NPM1P06748 294 aaKnown RBP eCLIP19.93■□□□□ 0.78
CCL8-201ENST00000394620 GALR2O43603 387 aaPredicted RBP19.9■□□□□ 0.78
CCL8-201ENST00000394620 PROM2Q8N271 834 aa19.84■□□□□ 0.77
CCL8-201ENST00000394620 PHF12Q96QT6 1004 aa19.81■□□□□ 0.76
CCL8-201ENST00000394620 MS4A3Q96HJ5 214 aa19.56■□□□□ 0.72
CCL8-201ENST00000394620 POTEB2H3BUK9 544 aa19.54■□□□□ 0.72
CCL8-201ENST00000394620 PELP1Q8IZL8 1130 aaKnown RBP19.54■□□□□ 0.72
CCL8-201ENST00000394620 OTUD5Q96G74 571 aa19.53■□□□□ 0.72
CCL8-201ENST00000394620 ASTLQ6HA08 431 aaPredicted RBP19.52■□□□□ 0.72
CCL8-201ENST00000394620 TSPYL2Q9H2G4 693 aaPredicted RBP19.5■□□□□ 0.71
CCL8-201ENST00000394620 CCDC61Q9Y6R9 512 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms