RNA–Protein interactions for RNA: ENST00000394374.6

MEN1-208, Transcript of menin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MEN1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEN1-208ENST00000394374 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.41■■□□□ 1.027e-6■■■■■ 74.5
MEN1-208ENST00000394374 HNRNPKP61978 463 aaKnown RBP eCLIP17.85■□□□□ 0.453e-16■■■■■ 56.1
MEN1-208ENST00000394374 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.46■□□□□ 0.551e-19■■■■■ 37.9
MEN1-208ENST00000394374 RPS3P23396 243 aaKnown RBP eCLIP18.92■□□□□ 0.624e-6■■■■■ 34.7
MEN1-208ENST00000394374 YBX3P16989 372 aaKnown RBP eCLIP20.87■□□□□ 0.936e-9■■■■■ 32.8
MEN1-208ENST00000394374 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.74■□□□□ 0.114e-7■■■■■ 32.1
MEN1-208ENST00000394374 AQRO60306 1485 aaKnown RBP eCLIP28.76■■■□□ 2.192e-6■■■■■ 31.7
MEN1-208ENST00000394374 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.54■□□□□ 0.43e-6■■■■■ 26.9
MEN1-208ENST00000394374 PCBP2Q15366 365 aaKnown RBP eCLIP18.94■□□□□ 0.624e-9■■■■□ 25.1
MEN1-208ENST00000394374 LARP4Q71RC2 724 aaKnown RBP eCLIP19.16■□□□□ 0.661e-6■■■■□ 25
MEN1-208ENST00000394374 G3BP1Q13283 466 aaKnown RBP eCLIP23.6■■□□□ 1.372e-6■■■■□ 23.6
MEN1-208ENST00000394374 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.49■□□□□ 0.711e-16■■■■□ 22.4
MEN1-208ENST00000394374 DDX3XO00571 662 aaKnown RBP eCLIP21.06■□□□□ 0.968e-8■■■■□ 22
MEN1-208ENST00000394374 SF3B4Q15427 424 aaKnown RBP eCLIP17.41■□□□□ 0.384e-6■■■■□ 20.7
MEN1-208ENST00000394374 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.28■□□□□ 0.682e-7■■■■□ 20.4
MEN1-208ENST00000394374 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.52■■□□□ 1.24e-8■■■■□ 20.2
MEN1-208ENST00000394374 EFTUD2Q15029 972 aaKnown RBP eCLIP20.26■□□□□ 0.833e-6■■■■□ 19.6
MEN1-208ENST00000394374 RBM15Q96T37 977 aaKnown RBP eCLIP20.36■□□□□ 0.852e-9■■■□□ 18.3
MEN1-208ENST00000394374 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.65■□□□□ 0.582e-6■■■□□ 16.8
MEN1-208ENST00000394374 SF3A3Q12874 501 aaKnown RBP eCLIP20.68■□□□□ 0.93e-6■■■□□ 16.5
MEN1-208ENST00000394374 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.81■□□□□ 0.928e-8■■■□□ 16.1
MEN1-208ENST00000394374 PPIGQ13427 754 aaKnown RBP eCLIP18.91■□□□□ 0.624e-7■■□□□ 14.3
MEN1-208ENST00000394374 EIF3HO15372 352 aaKnown RBP eCLIP20.45■□□□□ 0.867e-8■■□□□ 13.9
MEN1-208ENST00000394374 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.04■□□□□ 0.82e-6■■□□□ 13.1
Retrieved 24 of 24 RNA–protein pairs in 16.5 ms