RNA–Protein interactions for RNA: ENST00000391985.7

CFHR3-203, Transcript of complement factor H related 3, humanhuman

TSL 2 BASIC

Gene CFHR3, Length 1,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-203ENST00000391985 AEBP2Q6ZN18 517 aaPredicted RBP34.71■■■■□ 3.15
CFHR3-203ENST00000391985 CHIC1Q5VXU3 224 aa32.89■■■□□ 2.86
CFHR3-203ENST00000391985 SENP3Q9H4L4 574 aaPredicted RBP29.89■■■□□ 2.38
CFHR3-203ENST00000391985 PHF23Q9BUL5 403 aaPredicted RBP29.38■■■□□ 2.29
CFHR3-203ENST00000391985 FOXD1Q16676 465 aa27.73■■■□□ 2.03
CFHR3-203ENST00000391985 PLPPR3Q6T4P5 718 aa26.28■■□□□ 1.8
CFHR3-203ENST00000391985 MSH5O43196 834 aa26.24■■□□□ 1.79
CFHR3-203ENST00000391985 PIAS4Q8N2W9 510 aaPredicted RBP25.95■■□□□ 1.74
CFHR3-203ENST00000391985 POTEDQ86YR6 584 aa25.82■■□□□ 1.72
CFHR3-203ENST00000391985 PPP6R1Q9UPN7 881 aa25.67■■□□□ 1.7
CFHR3-203ENST00000391985 ADRA2BP18089 450 aa25.62■■□□□ 1.69
CFHR3-203ENST00000391985 SCAF1Q9H7N4 1312 aaKnown RBP23.74■■□□□ 1.39
CFHR3-203ENST00000391985 DMRT2Q9Y5R5 561 aa23.59■■□□□ 1.37
CFHR3-203ENST00000391985 MAPK8IP2Q13387 824 aaPredicted RBP23.57■■□□□ 1.36
CFHR3-203ENST00000391985 PPP4R3CPQ6ZMV5 832 aa22.93■■□□□ 1.26
CFHR3-203ENST00000391985 DCAF8L1A6NGE4 600 aa22.7■■□□□ 1.22
CFHR3-203ENST00000391985 HOXD11P31277 338 aaPredicted RBP22.64■■□□□ 1.21
CFHR3-203ENST00000391985 CNKSR2Q8WXI2 1034 aa22.62■■□□□ 1.21
CFHR3-203ENST00000391985 CACNB1Q02641 598 aaPredicted RBP22.61■■□□□ 1.21
CFHR3-203ENST00000391985 RNF216Q9NWF9 866 aaPredicted RBP22.46■■□□□ 1.19
CFHR3-203ENST00000391985 RNF39Q9H2S5 420 aa22.24■■□□□ 1.15
CFHR3-203ENST00000391985 NCBP3Q53F19 620 aaKnown RBP22.15■■□□□ 1.14
CFHR3-203ENST00000391985 DNAJC5BQ9UF47 199 aa22.03■■□□□ 1.12
CFHR3-203ENST00000391985 C1QBPQ07021 282 aaKnown RBP22.02■■□□□ 1.12
CFHR3-203ENST00000391985 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.65■■□□□ 1.06
CFHR3-203ENST00000391985 NPM3O75607 178 aaKnown RBP21.61■■□□□ 1.05
CFHR3-203ENST00000391985 U3KPZ7 1027 aaPredicted RBP21.04■□□□□ 0.96
CFHR3-203ENST00000391985 KCNA4P22459 653 aa20.96■□□□□ 0.95
CFHR3-203ENST00000391985 CAPN15O75808 1086 aa20.89■□□□□ 0.93
CFHR3-203ENST00000391985 SPINK5Q9NQ38 1064 aaPredicted RBP20.77■□□□□ 0.92
CFHR3-203ENST00000391985 APLP2Q06481 763 aa20.75■□□□□ 0.91
CFHR3-203ENST00000391985 DSG3P32926 999 aa20.74■□□□□ 0.91
CFHR3-203ENST00000391985 SLC4A2P04920 1241 aa20.64■□□□□ 0.89
CFHR3-203ENST00000391985 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.63■□□□□ 0.89
CFHR3-203ENST00000391985 HNRNPUL2Q1KMD3 747 aaKnown RBP20.63■□□□□ 0.89
CFHR3-203ENST00000391985 ZNF219Q9P2Y4 722 aaPredicted RBP20.52■□□□□ 0.88
CFHR3-203ENST00000391985 TRHP20396 242 aaPredicted RBP20.48■□□□□ 0.87
CFHR3-203ENST00000391985 SAMD1Q6SPF0 538 aaPredicted RBP20.43■□□□□ 0.86
CFHR3-203ENST00000391985 ABCB7O75027 752 aa20.29■□□□□ 0.84
CFHR3-203ENST00000391985 POTEHQ6S545 545 aa20.25■□□□□ 0.83
CFHR3-203ENST00000391985 MYCNP04198 464 aaPredicted RBP20.11■□□□□ 0.81
CFHR3-203ENST00000391985 RBM42Q9BTD8 480 aaKnown RBP19.99■□□□□ 0.79
CFHR3-203ENST00000391985 POLA2Q14181 598 aa19.86■□□□□ 0.77
CFHR3-203ENST00000391985 SLC4A1APQ9BWU0 796 aaKnown RBP19.85■□□□□ 0.77
CFHR3-203ENST00000391985 FOXD4L1Q9NU39 408 aa19.75■□□□□ 0.75
CFHR3-203ENST00000391985 ZBTB12Q9Y330 459 aaPredicted RBP19.61■□□□□ 0.73
CFHR3-203ENST00000391985 CHRDL2Q6WN34 429 aa19.51■□□□□ 0.71
CFHR3-203ENST00000391985 ATF5Q9Y2D1 282 aaPredicted RBP19.45■□□□□ 0.7
CFHR3-203ENST00000391985 AKT1S1Q96B36 256 aa19.4■□□□□ 0.7
CFHR3-203ENST00000391985 ATXN8OSP0DMR3 200 aa19.23■□□□□ 0.67
CFHR3-203ENST00000391985 OSCARQ8IYS5 282 aa19.18■□□□□ 0.66
CFHR3-203ENST00000391985 ZBTB22O15209 634 aa19.16■□□□□ 0.66
CFHR3-203ENST00000391985 REM2Q8IYK8 340 aaPredicted RBP19.14■□□□□ 0.65
CFHR3-203ENST00000391985 FBLN2P98095 1184 aa18.99■□□□□ 0.63
CFHR3-203ENST00000391985 PIP4P2Q8N4L2 257 aa18.94■□□□□ 0.62
CFHR3-203ENST00000391985 SPDYE2BA6NHP3 402 aa18.9■□□□□ 0.62
CFHR3-203ENST00000391985 PITPNM1O00562 1244 aa18.9■□□□□ 0.62
CFHR3-203ENST00000391985 SPDYE6P0CI01 402 aa18.9■□□□□ 0.62
CFHR3-203ENST00000391985 SPDYE2Q495Y8 402 aa18.9■□□□□ 0.62
CFHR3-203ENST00000391985 SP7Q8TDD2 431 aaPredicted RBP18.89■□□□□ 0.61
CFHR3-203ENST00000391985 FXR2P51116 673 aaKnown RBP eCLIP18.82■□□□□ 0.6
CFHR3-203ENST00000391985 HAX1O00165 279 aa18.76■□□□□ 0.59
CFHR3-203ENST00000391985 SPDYE1Q8NFV5 336 aaPredicted RBP18.65■□□□□ 0.58
CFHR3-203ENST00000391985 ZNF692Q9BU19 519 aaPredicted RBP18.62■□□□□ 0.57
CFHR3-203ENST00000391985 CLEC11AQ9Y240 323 aa18.59■□□□□ 0.57
CFHR3-203ENST00000391985 MKRN4PQ13434 485 aaPredicted RBP18.56■□□□□ 0.56
CFHR3-203ENST00000391985 SSUH2Q9Y2M2 353 aa18.53■□□□□ 0.56
CFHR3-203ENST00000391985 PRKAR2AP13861 404 aaKnown RBP18.47■□□□□ 0.55
CFHR3-203ENST00000391985 EVX2Q03828 476 aa18.29■□□□□ 0.52
CFHR3-203ENST00000391985 PABPN1Q86U42 306 aaKnown RBP eCLIP18.29■□□□□ 0.52
CFHR3-203ENST00000391985 PRR29P0C7W0 189 aa18.28■□□□□ 0.52
CFHR3-203ENST00000391985 C19orf67A6NJJ6 358 aa18.22■□□□□ 0.51
CFHR3-203ENST00000391985 CSRNP3Q8WYN3 585 aa18.16■□□□□ 0.5
CFHR3-203ENST00000391985 CHADLQ6NUI6 762 aa18.13■□□□□ 0.49
CFHR3-203ENST00000391985 GABBR2O75899 941 aa18.01■□□□□ 0.47
CFHR3-203ENST00000391985 FARP1Q9Y4F1 1045 aaPredicted RBP17.93■□□□□ 0.46
CFHR3-203ENST00000391985 STAG3Q9UJ98 1225 aa17.9■□□□□ 0.46
CFHR3-203ENST00000391985 CD44P16070 742 aaKnown RBP17.89■□□□□ 0.45
CFHR3-203ENST00000391985 CLCN6P51797 869 aa17.89■□□□□ 0.45
CFHR3-203ENST00000391985 EHMT2Q96KQ7 1210 aa17.84■□□□□ 0.45
CFHR3-203ENST00000391985 SPDYE4A6NLX3 237 aa17.73■□□□□ 0.43
CFHR3-203ENST00000391985 LHX8Q68G74 356 aa17.72■□□□□ 0.43
CFHR3-203ENST00000391985 CREBZFQ9NS37 354 aa17.63■□□□□ 0.41
CFHR3-203ENST00000391985 ZRANB1Q9UGI0 708 aa17.61■□□□□ 0.41
CFHR3-203ENST00000391985 DCBLD2Q96PD2 775 aa17.6■□□□□ 0.41
CFHR3-203ENST00000391985 ZNF579Q8NAF0 562 aaKnown RBP17.59■□□□□ 0.41
CFHR3-203ENST00000391985 PAK3O75914 559 aaPredicted RBP17.57■□□□□ 0.4
CFHR3-203ENST00000391985 NPM1P06748 294 aaKnown RBP eCLIP17.51■□□□□ 0.39
CFHR3-203ENST00000391985 POTEIP0CG38 1075 aa17.51■□□□□ 0.39
CFHR3-203ENST00000391985 GALR2O43603 387 aaPredicted RBP17.32■□□□□ 0.36
CFHR3-203ENST00000391985 MNX1P50219 401 aaPredicted RBP17.25■□□□□ 0.35
CFHR3-203ENST00000391985 PHF12Q96QT6 1004 aa17.24■□□□□ 0.35
CFHR3-203ENST00000391985 PROM2Q8N271 834 aa17.18■□□□□ 0.34
CFHR3-203ENST00000391985 PLEKHG5O94827 1062 aa17.17■□□□□ 0.34
CFHR3-203ENST00000391985 TSPYL2Q9H2G4 693 aaPredicted RBP17.04■□□□□ 0.32
CFHR3-203ENST00000391985 MS4A3Q96HJ5 214 aa17.03■□□□□ 0.32
CFHR3-203ENST00000391985 ASTLQ6HA08 431 aaPredicted RBP17■□□□□ 0.31
CFHR3-203ENST00000391985 SLC39A7Q92504 469 aa17■□□□□ 0.31
CFHR3-203ENST00000391985 MIER1Q8N108 512 aa16.99■□□□□ 0.31
CFHR3-203ENST00000391985 C7P10643 843 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 689.5 ms