RNA–Protein interactions for RNA: ENST00000391139.1

RNU6-1269P-201, Transcript of RNA, U6 small nuclear 1269, pseudogene, humanhuman

BASIC

Gene RNU6-1269P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1269P-201ENST00000391139 AEBP2Q6ZN18 517 aaPredicted RBP29.47■■■□□ 2.31
RNU6-1269P-201ENST00000391139 CHIC1Q5VXU3 224 aa27.73■■■□□ 2.03
RNU6-1269P-201ENST00000391139 SENP3Q9H4L4 574 aaPredicted RBP24.93■■□□□ 1.58
RNU6-1269P-201ENST00000391139 PHF23Q9BUL5 403 aaPredicted RBP24.67■■□□□ 1.54
RNU6-1269P-201ENST00000391139 FOXD1Q16676 465 aa23.39■■□□□ 1.33
RNU6-1269P-201ENST00000391139 PLPPR3Q6T4P5 718 aa21.99■■□□□ 1.11
RNU6-1269P-201ENST00000391139 PPP6R1Q9UPN7 881 aa21.84■■□□□ 1.09
RNU6-1269P-201ENST00000391139 MSH5O43196 834 aa21.78■■□□□ 1.08
RNU6-1269P-201ENST00000391139 PIAS4Q8N2W9 510 aaPredicted RBP21.71■■□□□ 1.07
RNU6-1269P-201ENST00000391139 ADRA2BP18089 450 aa21.69■■□□□ 1.06
RNU6-1269P-201ENST00000391139 POTEDQ86YR6 584 aa21.63■■□□□ 1.05
RNU6-1269P-201ENST00000391139 MAPK8IP2Q13387 824 aaPredicted RBP20■□□□□ 0.79
RNU6-1269P-201ENST00000391139 DMRT2Q9Y5R5 561 aa19.83■□□□□ 0.77
RNU6-1269P-201ENST00000391139 SCAF1Q9H7N4 1312 aaKnown RBP19.61■□□□□ 0.73
RNU6-1269P-201ENST00000391139 PPP4R3CPQ6ZMV5 832 aa19.32■□□□□ 0.68
RNU6-1269P-201ENST00000391139 HOXD11P31277 338 aaPredicted RBP19.07■□□□□ 0.64
RNU6-1269P-201ENST00000391139 CNKSR2Q8WXI2 1034 aa18.94■□□□□ 0.62
RNU6-1269P-201ENST00000391139 DCAF8L1A6NGE4 600 aa18.86■□□□□ 0.61
RNU6-1269P-201ENST00000391139 RNF216Q9NWF9 866 aaPredicted RBP18.83■□□□□ 0.6
RNU6-1269P-201ENST00000391139 CACNB1Q02641 598 aaPredicted RBP18.77■□□□□ 0.6
RNU6-1269P-201ENST00000391139 RNF39Q9H2S5 420 aa18.69■□□□□ 0.58
RNU6-1269P-201ENST00000391139 NCBP3Q53F19 620 aaKnown RBP18.38■□□□□ 0.53
RNU6-1269P-201ENST00000391139 DNAJC5BQ9UF47 199 aa18.38■□□□□ 0.53
RNU6-1269P-201ENST00000391139 NPM3O75607 178 aaKnown RBP18.31■□□□□ 0.52
RNU6-1269P-201ENST00000391139 C1QBPQ07021 282 aaKnown RBP18.31■□□□□ 0.52
RNU6-1269P-201ENST00000391139 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.02■□□□□ 0.48
RNU6-1269P-201ENST00000391139 KCNA4P22459 653 aa17.86■□□□□ 0.45
RNU6-1269P-201ENST00000391139 U3KPZ7 1027 aaPredicted RBP17.78■□□□□ 0.44
RNU6-1269P-201ENST00000391139 SLC4A2P04920 1241 aa17.59■□□□□ 0.41
RNU6-1269P-201ENST00000391139 SPINK5Q9NQ38 1064 aaPredicted RBP17.57■□□□□ 0.4
RNU6-1269P-201ENST00000391139 DSG3P32926 999 aa17.46■□□□□ 0.39
RNU6-1269P-201ENST00000391139 CAPN15O75808 1086 aa17.4■□□□□ 0.38
RNU6-1269P-201ENST00000391139 TRHP20396 242 aaPredicted RBP17.1■□□□□ 0.33
RNU6-1269P-201ENST00000391139 ABCB7O75027 752 aa17.06■□□□□ 0.32
RNU6-1269P-201ENST00000391139 ZNF219Q9P2Y4 722 aaPredicted RBP17.03■□□□□ 0.32
RNU6-1269P-201ENST00000391139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17■□□□□ 0.31
RNU6-1269P-201ENST00000391139 HNRNPUL2Q1KMD3 747 aaKnown RBP17■□□□□ 0.31
RNU6-1269P-201ENST00000391139 APLP2Q06481 763 aa16.98■□□□□ 0.31
RNU6-1269P-201ENST00000391139 SAMD1Q6SPF0 538 aaPredicted RBP16.95■□□□□ 0.3
RNU6-1269P-201ENST00000391139 POTEHQ6S545 545 aa16.87■□□□□ 0.29
RNU6-1269P-201ENST00000391139 MYCNP04198 464 aaPredicted RBP16.84■□□□□ 0.29
RNU6-1269P-201ENST00000391139 SLC4A1APQ9BWU0 796 aaKnown RBP16.72■□□□□ 0.27
RNU6-1269P-201ENST00000391139 POLA2Q14181 598 aa16.66■□□□□ 0.26
RNU6-1269P-201ENST00000391139 ATF5Q9Y2D1 282 aaPredicted RBP16.65■□□□□ 0.26
RNU6-1269P-201ENST00000391139 FOXD4L1Q9NU39 408 aa16.61■□□□□ 0.25
RNU6-1269P-201ENST00000391139 ZBTB22O15209 634 aa16.51■□□□□ 0.23
RNU6-1269P-201ENST00000391139 RBM42Q9BTD8 480 aaKnown RBP16.48■□□□□ 0.23
RNU6-1269P-201ENST00000391139 CHRDL2Q6WN34 429 aa16.28■□□□□ 0.2
RNU6-1269P-201ENST00000391139 ZBTB12Q9Y330 459 aaPredicted RBP16.18■□□□□ 0.18
RNU6-1269P-201ENST00000391139 OSCARQ8IYS5 282 aa16.17■□□□□ 0.18
RNU6-1269P-201ENST00000391139 AKT1S1Q96B36 256 aa16.16■□□□□ 0.18
RNU6-1269P-201ENST00000391139 ATXN8OSP0DMR3 200 aa16.09■□□□□ 0.17
RNU6-1269P-201ENST00000391139 REM2Q8IYK8 340 aaPredicted RBP16.06■□□□□ 0.16
RNU6-1269P-201ENST00000391139 PIP4P2Q8N4L2 257 aa15.93■□□□□ 0.14
RNU6-1269P-201ENST00000391139 PITPNM1O00562 1244 aa15.91■□□□□ 0.14
RNU6-1269P-201ENST00000391139 MKRN4PQ13434 485 aaPredicted RBP15.86■□□□□ 0.13
RNU6-1269P-201ENST00000391139 FXR2P51116 673 aaKnown RBP eCLIP15.82■□□□□ 0.12
RNU6-1269P-201ENST00000391139 SPDYE2BA6NHP3 402 aa15.75■□□□□ 0.11
RNU6-1269P-201ENST00000391139 SPDYE6P0CI01 402 aa15.75■□□□□ 0.11
RNU6-1269P-201ENST00000391139 SPDYE2Q495Y8 402 aa15.75■□□□□ 0.11
RNU6-1269P-201ENST00000391139 SP7Q8TDD2 431 aaPredicted RBP15.75■□□□□ 0.11
RNU6-1269P-201ENST00000391139 FBLN2P98095 1184 aa15.73■□□□□ 0.11
RNU6-1269P-201ENST00000391139 SSUH2Q9Y2M2 353 aa15.63■□□□□ 0.09
RNU6-1269P-201ENST00000391139 EVX2Q03828 476 aa15.58■□□□□ 0.08
RNU6-1269P-201ENST00000391139 CSRNP3Q8WYN3 585 aa15.56■□□□□ 0.08
RNU6-1269P-201ENST00000391139 HAX1O00165 279 aa15.55■□□□□ 0.08
RNU6-1269P-201ENST00000391139 ZNF692Q9BU19 519 aaPredicted RBP15.53■□□□□ 0.08
RNU6-1269P-201ENST00000391139 SPDYE1Q8NFV5 336 aaPredicted RBP15.47■□□□□ 0.07
RNU6-1269P-201ENST00000391139 CLEC11AQ9Y240 323 aa15.46■□□□□ 0.07
RNU6-1269P-201ENST00000391139 PRKAR2AP13861 404 aaKnown RBP15.44■□□□□ 0.06
RNU6-1269P-201ENST00000391139 PABPN1Q86U42 306 aaKnown RBP eCLIP15.34■□□□□ 0.05
RNU6-1269P-201ENST00000391139 C19orf67A6NJJ6 358 aa15.31■□□□□ 0.04
RNU6-1269P-201ENST00000391139 CHADLQ6NUI6 762 aa15.3■□□□□ 0.04
RNU6-1269P-201ENST00000391139 PRR29P0C7W0 189 aa15.18■□□□□ 0.02
RNU6-1269P-201ENST00000391139 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
RNU6-1269P-201ENST00000391139 GABBR2O75899 941 aa15.1■□□□□ 0.01
RNU6-1269P-201ENST00000391139 FARP1Q9Y4F1 1045 aaPredicted RBP15.01□□□□□ -0.01
RNU6-1269P-201ENST00000391139 CD44P16070 742 aaKnown RBP14.93□□□□□ -0.02
RNU6-1269P-201ENST00000391139 CREBZFQ9NS37 354 aa14.92□□□□□ -0.02
RNU6-1269P-201ENST00000391139 SPDYE4A6NLX3 237 aa14.89□□□□□ -0.03
RNU6-1269P-201ENST00000391139 POTEIP0CG38 1075 aa14.89□□□□□ -0.03
RNU6-1269P-201ENST00000391139 STAG3Q9UJ98 1225 aa14.77□□□□□ -0.05
RNU6-1269P-201ENST00000391139 LHX8Q68G74 356 aa14.74□□□□□ -0.05
RNU6-1269P-201ENST00000391139 ZNF579Q8NAF0 562 aaKnown RBP14.73□□□□□ -0.05
RNU6-1269P-201ENST00000391139 MNX1P50219 401 aaPredicted RBP14.71□□□□□ -0.05
RNU6-1269P-201ENST00000391139 ZRANB1Q9UGI0 708 aa14.69□□□□□ -0.06
RNU6-1269P-201ENST00000391139 CLCN6P51797 869 aa14.65□□□□□ -0.06
RNU6-1269P-201ENST00000391139 PROM2Q8N271 834 aa14.65□□□□□ -0.06
RNU6-1269P-201ENST00000391139 GALR2O43603 387 aaPredicted RBP14.61□□□□□ -0.07
RNU6-1269P-201ENST00000391139 PHF12Q96QT6 1004 aa14.54□□□□□ -0.08
RNU6-1269P-201ENST00000391139 DCBLD2Q96PD2 775 aa14.52□□□□□ -0.09
RNU6-1269P-201ENST00000391139 NPM1P06748 294 aaKnown RBP eCLIP14.44□□□□□ -0.1
RNU6-1269P-201ENST00000391139 POTEB2H3BUK9 544 aa14.41□□□□□ -0.1
RNU6-1269P-201ENST00000391139 PELP1Q8IZL8 1130 aaKnown RBP14.4□□□□□ -0.1
RNU6-1269P-201ENST00000391139 PAK3O75914 559 aaPredicted RBP14.39□□□□□ -0.11
RNU6-1269P-201ENST00000391139 MS4A3Q96HJ5 214 aa14.35□□□□□ -0.11
RNU6-1269P-201ENST00000391139 OTUD5Q96G74 571 aa14.31□□□□□ -0.12
RNU6-1269P-201ENST00000391139 CCDC61Q9Y6R9 512 aa14.31□□□□□ -0.12
RNU6-1269P-201ENST00000391139 ASTLQ6HA08 431 aaPredicted RBP14.28□□□□□ -0.12
RNU6-1269P-201ENST00000391139 TSPYL2Q9H2G4 693 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms