RNA–Protein interactions for RNA: ENST00000391096.1

RNU6-1248P-201, Transcript of RNA, U6 small nuclear 1248, pseudogene, humanhuman

BASIC

Gene RNU6-1248P, Length 64 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1248P-201ENST00000391096 AEBP2Q6ZN18 517 aaPredicted RBP14.35□□□□□ -0.11
RNU6-1248P-201ENST00000391096 CHIC1Q5VXU3 224 aa13.62□□□□□ -0.23
RNU6-1248P-201ENST00000391096 POTEDQ86YR6 584 aa12.16□□□□□ -0.46
RNU6-1248P-201ENST00000391096 PHF23Q9BUL5 403 aaPredicted RBP12.09□□□□□ -0.47
RNU6-1248P-201ENST00000391096 SENP3Q9H4L4 574 aaPredicted RBP11.98□□□□□ -0.49
RNU6-1248P-201ENST00000391096 FOXD1Q16676 465 aa11.31□□□□□ -0.6
RNU6-1248P-201ENST00000391096 PLPPR3Q6T4P5 718 aa10.83□□□□□ -0.68
RNU6-1248P-201ENST00000391096 PPP6R1Q9UPN7 881 aa10.75□□□□□ -0.69
RNU6-1248P-201ENST00000391096 ADRA2BP18089 450 aa10.66□□□□□ -0.7
RNU6-1248P-201ENST00000391096 MSH5O43196 834 aa10.65□□□□□ -0.7
RNU6-1248P-201ENST00000391096 PIAS4Q8N2W9 510 aaPredicted RBP10.47□□□□□ -0.73
RNU6-1248P-201ENST00000391096 CACNB1Q02641 598 aaPredicted RBP9.8□□□□□ -0.84
RNU6-1248P-201ENST00000391096 MAPK8IP2Q13387 824 aaPredicted RBP9.8□□□□□ -0.84
RNU6-1248P-201ENST00000391096 PPP4R3CPQ6ZMV5 832 aa9.59□□□□□ -0.87
RNU6-1248P-201ENST00000391096 DMRT2Q9Y5R5 561 aa9.59□□□□□ -0.87
RNU6-1248P-201ENST00000391096 SCAF1Q9H7N4 1312 aaKnown RBP9.5□□□□□ -0.89
RNU6-1248P-201ENST00000391096 HOXD11P31277 338 aaPredicted RBP9.32□□□□□ -0.92
RNU6-1248P-201ENST00000391096 CNKSR2Q8WXI2 1034 aa9.32□□□□□ -0.92
RNU6-1248P-201ENST00000391096 POTEHQ6S545 545 aa9.31□□□□□ -0.92
RNU6-1248P-201ENST00000391096 RNF216Q9NWF9 866 aaPredicted RBP9.22□□□□□ -0.93
RNU6-1248P-201ENST00000391096 NPM3O75607 178 aaKnown RBP9.17□□□□□ -0.94
RNU6-1248P-201ENST00000391096 KCNA4P22459 653 aa9.13□□□□□ -0.95
RNU6-1248P-201ENST00000391096 NCBP3Q53F19 620 aaKnown RBP9.09□□□□□ -0.95
RNU6-1248P-201ENST00000391096 DCAF8L1A6NGE4 600 aa9.06□□□□□ -0.96
RNU6-1248P-201ENST00000391096 RNF39Q9H2S5 420 aa9.05□□□□□ -0.96
RNU6-1248P-201ENST00000391096 DNAJC5BQ9UF47 199 aa8.94□□□□□ -0.98
RNU6-1248P-201ENST00000391096 C1QBPQ07021 282 aaKnown RBP8.83□□□□□ -1
RNU6-1248P-201ENST00000391096 SLC4A2P04920 1241 aa8.8□□□□□ -1
RNU6-1248P-201ENST00000391096 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.74□□□□□ -1.01
RNU6-1248P-201ENST00000391096 U3KPZ7 1027 aaPredicted RBP8.73□□□□□ -1.01
RNU6-1248P-201ENST00000391096 SPINK5Q9NQ38 1064 aaPredicted RBP8.58□□□□□ -1.04
RNU6-1248P-201ENST00000391096 SLC4A1APQ9BWU0 796 aaKnown RBP8.53□□□□□ -1.04
RNU6-1248P-201ENST00000391096 ZBTB22O15209 634 aa8.49□□□□□ -1.05
RNU6-1248P-201ENST00000391096 DSG3P32926 999 aa8.44□□□□□ -1.06
RNU6-1248P-201ENST00000391096 CAPN15O75808 1086 aa8.4□□□□□ -1.06
RNU6-1248P-201ENST00000391096 FOXD4L1Q9NU39 408 aa8.37□□□□□ -1.07
RNU6-1248P-201ENST00000391096 ATF5Q9Y2D1 282 aaPredicted RBP8.37□□□□□ -1.07
RNU6-1248P-201ENST00000391096 MYCNP04198 464 aaPredicted RBP8.36□□□□□ -1.07
RNU6-1248P-201ENST00000391096 TRHP20396 242 aaPredicted RBP8.32□□□□□ -1.08
RNU6-1248P-201ENST00000391096 ABCB7O75027 752 aa8.31□□□□□ -1.08
RNU6-1248P-201ENST00000391096 SAMD1Q6SPF0 538 aaPredicted RBP8.29□□□□□ -1.08
RNU6-1248P-201ENST00000391096 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.27□□□□□ -1.09
RNU6-1248P-201ENST00000391096 HNRNPUL2Q1KMD3 747 aaKnown RBP8.27□□□□□ -1.09
RNU6-1248P-201ENST00000391096 SP7Q8TDD2 431 aaPredicted RBP8.25□□□□□ -1.09
RNU6-1248P-201ENST00000391096 ZNF219Q9P2Y4 722 aaPredicted RBP8.25□□□□□ -1.09
RNU6-1248P-201ENST00000391096 APLP2Q06481 763 aa8.19□□□□□ -1.1
RNU6-1248P-201ENST00000391096 POLA2Q14181 598 aa8.17□□□□□ -1.1
RNU6-1248P-201ENST00000391096 CSRNP3Q8WYN3 585 aa8.16□□□□□ -1.1
RNU6-1248P-201ENST00000391096 PLSCR2Q9NRY7 297 aa8.09□□□□□ -1.11
RNU6-1248P-201ENST00000391096 ATXN8OSP0DMR3 200 aa8.08□□□□□ -1.12
RNU6-1248P-201ENST00000391096 CHRDL2Q6WN34 429 aa8.01□□□□□ -1.13
RNU6-1248P-201ENST00000391096 EHMT2Q96KQ7 1210 aa8.01□□□□□ -1.13
RNU6-1248P-201ENST00000391096 MKRN4PQ13434 485 aaPredicted RBP7.97□□□□□ -1.13
RNU6-1248P-201ENST00000391096 OSCARQ8IYS5 282 aa7.92□□□□□ -1.14
RNU6-1248P-201ENST00000391096 RBM42Q9BTD8 480 aaKnown RBP7.86□□□□□ -1.15
RNU6-1248P-201ENST00000391096 ZBTB12Q9Y330 459 aaPredicted RBP7.85□□□□□ -1.15
RNU6-1248P-201ENST00000391096 AKT1S1Q96B36 256 aa7.8□□□□□ -1.16
RNU6-1248P-201ENST00000391096 REM2Q8IYK8 340 aaPredicted RBP7.78□□□□□ -1.16
RNU6-1248P-201ENST00000391096 HAX1O00165 279 aa7.76□□□□□ -1.17
RNU6-1248P-201ENST00000391096 LHX8Q68G74 356 aa7.76□□□□□ -1.17
RNU6-1248P-201ENST00000391096 FBLN2P98095 1184 aa7.73□□□□□ -1.17
RNU6-1248P-201ENST00000391096 SSUH2Q9Y2M2 353 aa7.73□□□□□ -1.17
RNU6-1248P-201ENST00000391096 SPDYE2BA6NHP3 402 aa7.72□□□□□ -1.17
RNU6-1248P-201ENST00000391096 PITPNM1O00562 1244 aa7.72□□□□□ -1.17
RNU6-1248P-201ENST00000391096 SPDYE6P0CI01 402 aa7.72□□□□□ -1.17
RNU6-1248P-201ENST00000391096 SPDYE2Q495Y8 402 aa7.72□□□□□ -1.17
RNU6-1248P-201ENST00000391096 EVX2Q03828 476 aa7.68□□□□□ -1.18
RNU6-1248P-201ENST00000391096 PIP4P2Q8N4L2 257 aa7.65□□□□□ -1.18
RNU6-1248P-201ENST00000391096 ZNF692Q9BU19 519 aaPredicted RBP7.65□□□□□ -1.18
RNU6-1248P-201ENST00000391096 FXR2P51116 673 aaKnown RBP eCLIP7.64□□□□□ -1.19
RNU6-1248P-201ENST00000391096 PABPN1Q86U42 306 aaKnown RBP eCLIP7.57□□□□□ -1.2
RNU6-1248P-201ENST00000391096 SPDYE1Q8NFV5 336 aaPredicted RBP7.52□□□□□ -1.21
RNU6-1248P-201ENST00000391096 CLEC11AQ9Y240 323 aa7.52□□□□□ -1.21
RNU6-1248P-201ENST00000391096 SPDYE4A6NLX3 237 aa7.5□□□□□ -1.21
RNU6-1248P-201ENST00000391096 CHADLQ6NUI6 762 aa7.49□□□□□ -1.21
RNU6-1248P-201ENST00000391096 PRKAR2AP13861 404 aaKnown RBP7.47□□□□□ -1.21
RNU6-1248P-201ENST00000391096 PROM2Q8N271 834 aa7.47□□□□□ -1.21
RNU6-1248P-201ENST00000391096 PRR29P0C7W0 189 aa7.4□□□□□ -1.22
RNU6-1248P-201ENST00000391096 C19orf67A6NJJ6 358 aa7.39□□□□□ -1.23
RNU6-1248P-201ENST00000391096 CREBZFQ9NS37 354 aa7.39□□□□□ -1.23
RNU6-1248P-201ENST00000391096 GABBR2O75899 941 aa7.38□□□□□ -1.23
RNU6-1248P-201ENST00000391096 MNX1P50219 401 aaPredicted RBP7.35□□□□□ -1.23
RNU6-1248P-201ENST00000391096 POTEMA6NI47 508 aa7.34□□□□□ -1.23
RNU6-1248P-201ENST00000391096 FARP1Q9Y4F1 1045 aaPredicted RBP7.33□□□□□ -1.24
RNU6-1248P-201ENST00000391096 POTEGQ6S5H5 508 aa7.29□□□□□ -1.24
RNU6-1248P-201ENST00000391096 STAG3Q9UJ98 1225 aa7.28□□□□□ -1.24
RNU6-1248P-201ENST00000391096 FKBP8Q14318 412 aa7.27□□□□□ -1.25
RNU6-1248P-201ENST00000391096 POTEIP0CG38 1075 aa7.26□□□□□ -1.25
RNU6-1248P-201ENST00000391096 CD44P16070 742 aaKnown RBP7.22□□□□□ -1.25
RNU6-1248P-201ENST00000391096 PCDH10Q9P2E7 1040 aa7.22□□□□□ -1.25
RNU6-1248P-201ENST00000391096 ZNF579Q8NAF0 562 aaKnown RBP7.15□□□□□ -1.26
RNU6-1248P-201ENST00000391096 OTUD5Q96G74 571 aa7.15□□□□□ -1.26
RNU6-1248P-201ENST00000391096 ZRANB1Q9UGI0 708 aa7.13□□□□□ -1.27
RNU6-1248P-201ENST00000391096 PHF12Q96QT6 1004 aa7.12□□□□□ -1.27
RNU6-1248P-201ENST00000391096 GALR2O43603 387 aaPredicted RBP7.1□□□□□ -1.27
RNU6-1248P-201ENST00000391096 RASEFQ8IZ41 740 aa7.1□□□□□ -1.27
RNU6-1248P-201ENST00000391096 MIER1Q8N108 512 aa7.09□□□□□ -1.27
RNU6-1248P-201ENST00000391096 NUBP1P53384 320 aa7.08□□□□□ -1.28
RNU6-1248P-201ENST00000391096 CCDC61Q9Y6R9 512 aa7.08□□□□□ -1.28
RNU6-1248P-201ENST00000391096 NPM1P06748 294 aaKnown RBP eCLIP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms